RNA–Protein interactions for RNA: ENST00000376091.7

CLCN5-203, Transcript of chloride voltage-gated channel 5, humanhuman

TSL 2 BASIC

Gene CLCN5, Length 3,046 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN5-203ENST00000376091 FHOD3Q2V2M9 1422 aa17.29■□□□□ 0.36
CLCN5-203ENST00000376091 MRC2Q9UBG0 1479 aa17.27■□□□□ 0.36
CLCN5-203ENST00000376091 TIAM1Q13009 1591 aa17.25■□□□□ 0.35
CLCN5-203ENST00000376091 TARBP1Q13395 1621 aaKnown RBP17.24■□□□□ 0.35
CLCN5-203ENST00000376091 RRBP1Q9P2E9 1410 aaKnown RBP17.24■□□□□ 0.35
CLCN5-203ENST00000376091 CTTNBP2Q8WZ74 1663 aa17.24■□□□□ 0.35
CLCN5-203ENST00000376091 EFCAB5A4FU69 1503 aa17.24■□□□□ 0.35
CLCN5-203ENST00000376091 CCNB3Q8WWL7 1395 aa17.23■□□□□ 0.35
CLCN5-203ENST00000376091 ITGAEP38570 1179 aa17.23■□□□□ 0.35
CLCN5-203ENST00000376091 MAP3K1Q13233 1512 aa17.22■□□□□ 0.35
CLCN5-203ENST00000376091 PCF11O94913 1555 aaKnown RBP17.22■□□□□ 0.35
CLCN5-203ENST00000376091 AQRO60306 1485 aaKnown RBP eCLIP17.2■□□□□ 0.34
CLCN5-203ENST00000376091 LRRC9Q6ZRR7 1453 aa17.2■□□□□ 0.34
CLCN5-203ENST00000376091 FYCO1Q9BQS8 1478 aa17.16■□□□□ 0.34
CLCN5-203ENST00000376091 FMN1Q68DA7 1419 aa17.16■□□□□ 0.34
CLCN5-203ENST00000376091 CASKIN1Q8WXD9 1431 aa17.16■□□□□ 0.34
CLCN5-203ENST00000376091 ERCC6Q03468 1493 aa17.15■□□□□ 0.34
CLCN5-203ENST00000376091 PHLDB1Q86UU1 1377 aa17.13■□□□□ 0.33
CLCN5-203ENST00000376091 PBRM1Q86U86 1689 aa17.13■□□□□ 0.33
CLCN5-203ENST00000376091 CFAP43Q8NDM7 1665 aa17.13■□□□□ 0.33
CLCN5-203ENST00000376091 FAM50AQ14320 339 aaKnown RBP17.13■□□□□ 0.33
CLCN5-203ENST00000376091 GRIN2BQ13224 1484 aa17.12■□□□□ 0.33
CLCN5-203ENST00000376091 IFT140Q96RY7 1462 aa17.12■□□□□ 0.33
CLCN5-203ENST00000376091 WDR62O43379 1518 aa17.1■□□□□ 0.33
CLCN5-203ENST00000376091 ZNF608Q9ULD9 1512 aaPredicted RBP17.1■□□□□ 0.33
CLCN5-203ENST00000376091 SAMD9Q5K651 1589 aa17.09■□□□□ 0.33
CLCN5-203ENST00000376091 DHX57Q6P158 1386 aaKnown RBP17.09■□□□□ 0.33
CLCN5-203ENST00000376091 ADAMTS12P58397 1594 aa17.07■□□□□ 0.32
CLCN5-203ENST00000376091 SNAPC4Q5SXM2 1469 aa17.07■□□□□ 0.32
CLCN5-203ENST00000376091 DIEXFQ68CQ4 756 aaKnown RBP17.06■□□□□ 0.32
CLCN5-203ENST00000376091 MTUS2Q5JR59 1369 aa17.06■□□□□ 0.32
CLCN5-203ENST00000376091 ZNF316A6NFI3 1004 aaPredicted RBP17.05■□□□□ 0.32
CLCN5-203ENST00000376091 CLSPNQ9HAW4 1339 aa17.04■□□□□ 0.32
CLCN5-203ENST00000376091 IQGAP2Q13576 1575 aa17.02■□□□□ 0.32
CLCN5-203ENST00000376091 RAB3GAP2Q9H2M9 1393 aa17■□□□□ 0.31
CLCN5-203ENST00000376091 EIF4G3O43432 1585 aaKnown RBP16.97■□□□□ 0.31
CLCN5-203ENST00000376091 SETD5Q9C0A6 1442 aa16.97■□□□□ 0.31
CLCN5-203ENST00000376091 THOC2Q8NI27 1593 aaKnown RBP16.95■□□□□ 0.3
CLCN5-203ENST00000376091 FBLN2P98095 1184 aa16.94■□□□□ 0.3
CLCN5-203ENST00000376091 FGD6Q6ZV73 1430 aa16.94■□□□□ 0.3
CLCN5-203ENST00000376091 ARID3CA6NKF2 412 aa16.94■□□□□ 0.3
CLCN5-203ENST00000376091 CHMP7Q8WUX9 453 aaPredicted RBP16.94■□□□□ 0.3
CLCN5-203ENST00000376091 LRRIQ1Q96JM4 1722 aa16.92■□□□□ 0.3
CLCN5-203ENST00000376091 GRIN2AQ12879 1464 aa16.92■□□□□ 0.3
CLCN5-203ENST00000376091 KIAA0586Q9BVV6 1533 aa16.91■□□□□ 0.3
CLCN5-203ENST00000376091 NCOA2Q15596 1464 aa16.91■□□□□ 0.3
CLCN5-203ENST00000376091 CCDC18Q5T9S5 1454 aa16.91■□□□□ 0.3
CLCN5-203ENST00000376091 UGGT2Q9NYU1 1516 aa16.9■□□□□ 0.3
CLCN5-203ENST00000376091 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.9■□□□□ 0.34e-7■■■■■ 35.3
CLCN5-203ENST00000376091 HECW1Q76N89 1606 aa16.9■□□□□ 0.3
CLCN5-203ENST00000376091 EHBP1L1Q8N3D4 1523 aa16.89■□□□□ 0.29
CLCN5-203ENST00000376091 MAGI1Q96QZ7 1491 aaPredicted RBP16.88■□□□□ 0.29
CLCN5-203ENST00000376091 MYOM3Q5VTT5 1437 aa16.88■□□□□ 0.29
CLCN5-203ENST00000376091 SUPT6HQ7KZ85 1726 aaKnown RBP16.87■□□□□ 0.29
CLCN5-203ENST00000376091 EPRSP07814 1512 aaKnown RBP16.86■□□□□ 0.29
CLCN5-203ENST00000376091 MYT1Q01538 1121 aa16.86■□□□□ 0.29
CLCN5-203ENST00000376091 MAGI3Q5TCQ9 1506 aa16.85■□□□□ 0.29
CLCN5-203ENST00000376091 SYNJ2O15056 1496 aa16.85■□□□□ 0.29
CLCN5-203ENST00000376091 CDK13Q14004 1512 aaKnown RBP16.84■□□□□ 0.29
CLCN5-203ENST00000376091 DISP1Q96F81 1524 aa16.83■□□□□ 0.29
CLCN5-203ENST00000376091 KIAA0556O60303 1618 aa16.83■□□□□ 0.28
CLCN5-203ENST00000376091 MAPKBP1O60336 1514 aa16.82■□□□□ 0.28
CLCN5-203ENST00000376091 NEUROD1Q13562 356 aa16.79■□□□□ 0.28
CLCN5-203ENST00000376091 CEP170Q5SW79 1584 aa16.79■□□□□ 0.28
CLCN5-203ENST00000376091 PTPRKQ15262 1439 aa16.79■□□□□ 0.28
CLCN5-203ENST00000376091 ARHGEF11O15085 1522 aa16.77■□□□□ 0.28
CLCN5-203ENST00000376091 PTPN23Q9H3S7 1636 aa16.77■□□□□ 0.28
CLCN5-203ENST00000376091 SIN3AQ96ST3 1273 aa16.77■□□□□ 0.27
CLCN5-203ENST00000376091 JPH4Q96JJ6 628 aa16.76■□□□□ 0.27
CLCN5-203ENST00000376091 CHIC2Q9UKJ5 165 aa16.75■□□□□ 0.27
CLCN5-203ENST00000376091 CDK11AQ9UQ88 783 aaPredicted RBP16.75■□□□□ 0.27
CLCN5-203ENST00000376091 HFM1A2PYH4 1435 aa16.74■□□□□ 0.27
CLCN5-203ENST00000376091 NUP153P49790 1475 aaKnown RBP16.74■□□□□ 0.27
CLCN5-203ENST00000376091 CARMIL2Q6F5E8 1435 aa16.74■□□□□ 0.27
CLCN5-203ENST00000376091 RAPGEF6Q8TEU7 1601 aa16.73■□□□□ 0.27
CLCN5-203ENST00000376091 NUP160Q12769 1436 aa16.73■□□□□ 0.27
CLCN5-203ENST00000376091 RRP7BPQ9NSQ0 103 aa16.72■□□□□ 0.27
CLCN5-203ENST00000376091 MIER1Q8N108 512 aa16.72■□□□□ 0.27
CLCN5-203ENST00000376091 NAIPQ13075 1403 aa16.71■□□□□ 0.26
CLCN5-203ENST00000376091 TCOF1Q13428 1488 aaKnown RBP16.7■□□□□ 0.26
CLCN5-203ENST00000376091 PLB1Q6P1J6 1458 aa16.69■□□□□ 0.26
CLCN5-203ENST00000376091 MIA2Q96PC5 1412 aa16.69■□□□□ 0.26
CLCN5-203ENST00000376091 CENPBP07199 599 aaPredicted RBP16.67■□□□□ 0.26
CLCN5-203ENST00000376091 UACAQ9BZF9 1416 aa16.67■□□□□ 0.26
CLCN5-203ENST00000376091 SCAF1Q9H7N4 1312 aaKnown RBP16.66■□□□□ 0.26
CLCN5-203ENST00000376091 YTHDC1Q96MU7 727 aaKnown RBP16.64■□□□□ 0.26
CLCN5-203ENST00000376091 PRG4Q92954 1404 aaPredicted RBP16.64■□□□□ 0.25
CLCN5-203ENST00000376091 TRIM52Q96A61 297 aa16.64■□□□□ 0.25
CLCN5-203ENST00000376091 TIMELESSQ9UNS1 1208 aa16.63■□□□□ 0.25
CLCN5-203ENST00000376091 ACIN1Q9UKV3 1341 aaKnown RBP16.63■□□□□ 0.25
CLCN5-203ENST00000376091 ZNF644Q9H582 1327 aaPredicted RBP16.62■□□□□ 0.25
CLCN5-203ENST00000376091 TROQ12816 1431 aaPredicted RBP16.62■□□□□ 0.25
CLCN5-203ENST00000376091 TONSLQ96HA7 1378 aa16.6■□□□□ 0.25
CLCN5-203ENST00000376091 CFDP1Q9UEE9 299 aaPredicted RBP16.59■□□□□ 0.25
CLCN5-203ENST00000376091 ZNF777Q9ULD5 760 aaPredicted RBP16.59■□□□□ 0.25
CLCN5-203ENST00000376091 PLEKHD1A6NEE1 506 aa16.58■□□□□ 0.24
CLCN5-203ENST00000376091 DAPK1P53355 1430 aa16.57■□□□□ 0.24
CLCN5-203ENST00000376091 AKNAQ7Z591 1439 aa16.57■□□□□ 0.24
CLCN5-203ENST00000376091 PPP1R15AO75807 674 aaPredicted RBP16.57■□□□□ 0.24
CLCN5-203ENST00000376091 GCC2Q8IWJ2 1684 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms