RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 JPH4Q96JJ6 628 aa21.54■■□□□ 1.04
LSM2-208ENST00000375661 MAPKBP1O60336 1514 aa21.46■■□□□ 1.03
LSM2-208ENST00000375661 ABCC10Q5T3U5 1492 aa21.44■■□□□ 1.02
LSM2-208ENST00000375661 CUL7Q14999 1698 aa21.42■■□□□ 1.02
LSM2-208ENST00000375661 NPM1P06748 294 aaKnown RBP eCLIP21.41■■□□□ 1.02
LSM2-208ENST00000375661 ADCY10Q96PN6 1610 aa21.4■■□□□ 1.02
LSM2-208ENST00000375661 KIAA0586Q9BVV6 1533 aa21.39■■□□□ 1.02
LSM2-208ENST00000375661 DIP2BQ9P265 1576 aa21.39■■□□□ 1.01
LSM2-208ENST00000375661 FAM69CQ0P6D2 419 aa21.37■■□□□ 1.01
LSM2-208ENST00000375661 KIF27Q86VH2 1401 aa21.34■■□□□ 1.01
LSM2-208ENST00000375661 IGF1RP08069 1367 aa21.33■■□□□ 1
LSM2-208ENST00000375661 KDM6BO15054 1643 aa21.28■■□□□ 1
LSM2-208ENST00000375661 TSPOAP1O95153 1857 aa21.25■□□□□ 0.99
LSM2-208ENST00000375661 PTPRGP23470 1445 aa21.21■□□□□ 0.99
LSM2-208ENST00000375661 CARMIL2Q6F5E8 1435 aa21.2■□□□□ 0.98
LSM2-208ENST00000375661 CARMIL1Q5VZK9 1371 aa21.19■□□□□ 0.98
LSM2-208ENST00000375661 TNIKQ9UKE5 1360 aa21.17■□□□□ 0.98
LSM2-208ENST00000375661 IQGAP2Q13576 1575 aa21.16■□□□□ 0.98
LSM2-208ENST00000375661 ABCC2Q92887 1545 aa21.16■□□□□ 0.98
LSM2-208ENST00000375661 GLI2P10070 1586 aa21.14■□□□□ 0.97
LSM2-208ENST00000375661 UHRF1BP1LA0JNW5 1464 aa21.13■□□□□ 0.97
LSM2-208ENST00000375661 PLB1Q6P1J6 1458 aa21.12■□□□□ 0.97
LSM2-208ENST00000375661 PPRC1Q5VV67 1664 aaKnown RBP21.1■□□□□ 0.97
LSM2-208ENST00000375661 KDM4FA0A1W2PPD8 638 aa21.08■□□□□ 0.97
LSM2-208ENST00000375661 ASXL2Q76L83 1435 aa21.08■□□□□ 0.97
LSM2-208ENST00000375661 UACAQ9BZF9 1416 aa21.06■□□□□ 0.96
LSM2-208ENST00000375661 DISP1Q96F81 1524 aa21.04■□□□□ 0.96
LSM2-208ENST00000375661 UGGT2Q9NYU1 1516 aa21.03■□□□□ 0.96
LSM2-208ENST00000375661 TTBK1Q5TCY1 1321 aaPredicted RBP21.03■□□□□ 0.96
LSM2-208ENST00000375661 KDM5BQ9UGL1 1544 aa21.01■□□□□ 0.95
LSM2-208ENST00000375661 MAP3K4Q9Y6R4 1608 aa21■□□□□ 0.95
LSM2-208ENST00000375661 RAPGEF2Q9Y4G8 1499 aa21■□□□□ 0.95
LSM2-208ENST00000375661 ZCCHC11Q5TAX3 1644 aaKnown RBP20.98■□□□□ 0.95
LSM2-208ENST00000375661 EPRSP07814 1512 aaKnown RBP20.98■□□□□ 0.95
LSM2-208ENST00000375661 KIAA0556O60303 1618 aa20.97■□□□□ 0.95
LSM2-208ENST00000375661 TEX14Q8IWB6 1497 aa20.96■□□□□ 0.95
LSM2-208ENST00000375661 CTTNBP2Q8WZ74 1663 aa20.93■□□□□ 0.94
LSM2-208ENST00000375661 ADGRL1O94910 1474 aa20.9■□□□□ 0.94
LSM2-208ENST00000375661 COL17A1Q9UMD9 1497 aaPredicted RBP20.88■□□□□ 0.93
LSM2-208ENST00000375661 WDR7Q9Y4E6 1490 aa20.86■□□□□ 0.93
LSM2-208ENST00000375661 GOLGA3Q08378 1498 aa20.84■□□□□ 0.93
LSM2-208ENST00000375661 CFAP43Q8NDM7 1665 aa20.83■□□□□ 0.93
LSM2-208ENST00000375661 ABCA8O94911 1581 aa20.8■□□□□ 0.92
LSM2-208ENST00000375661 MAGI3Q5TCQ9 1506 aa20.79■□□□□ 0.92
LSM2-208ENST00000375661 CD109Q6YHK3 1445 aa20.75■□□□□ 0.91
LSM2-208ENST00000375661 HECW2Q9P2P5 1572 aa20.72■□□□□ 0.91
LSM2-208ENST00000375661 PRXQ9BXM0 1461 aa20.71■□□□□ 0.91
LSM2-208ENST00000375661 ILDR1Q86SU0 546 aaPredicted RBP20.68■□□□□ 0.9
LSM2-208ENST00000375661 FAM9AQ8IZU1 332 aaPredicted RBP20.66■□□□□ 0.9
LSM2-208ENST00000375661 KCNH8Q96L42 1107 aa20.65■□□□□ 0.9
LSM2-208ENST00000375661 ARAP3Q8WWN8 1544 aa20.63■□□□□ 0.89
LSM2-208ENST00000375661 KIF21BO75037 1637 aa20.61■□□□□ 0.89
LSM2-208ENST00000375661 ABCA9Q8IUA7 1624 aa20.6■□□□□ 0.89
LSM2-208ENST00000375661 PHLDB1Q86UU1 1377 aa20.59■□□□□ 0.89
LSM2-208ENST00000375661 ATP10BO94823 1461 aa20.58■□□□□ 0.89
LSM2-208ENST00000375661 SAMD9Q5K651 1589 aa20.57■□□□□ 0.88
LSM2-208ENST00000375661 RAPGEF6Q8TEU7 1601 aa20.54■□□□□ 0.88
LSM2-208ENST00000375661 NEO1Q92859 1461 aa20.5■□□□□ 0.87
LSM2-208ENST00000375661 ADAMTSL3P82987 1691 aa20.5■□□□□ 0.87
LSM2-208ENST00000375661 P3H3Q8IVL6 736 aa20.48■□□□□ 0.87
LSM2-208ENST00000375661 ARID3CA6NKF2 412 aa20.46■□□□□ 0.87
LSM2-208ENST00000375661 CSRNP3Q8WYN3 585 aa20.45■□□□□ 0.86
LSM2-208ENST00000375661 BCORL1Q5H9F3 1711 aa20.43■□□□□ 0.86
LSM2-208ENST00000375661 PTPRMP28827 1452 aa20.43■□□□□ 0.86
LSM2-208ENST00000375661 FRMPD1Q5SYB0 1578 aa20.42■□□□□ 0.86
LSM2-208ENST00000375661 EEA1Q15075 1411 aa20.41■□□□□ 0.86
LSM2-208ENST00000375661 NUP153P49790 1475 aaKnown RBP20.41■□□□□ 0.86
LSM2-208ENST00000375661 RAPGEF3O95398 923 aa20.39■□□□□ 0.85
LSM2-208ENST00000375661 CFAP74Q9C0B2 1584 aa20.38■□□□□ 0.85
LSM2-208ENST00000375661 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.38■□□□□ 0.85
LSM2-208ENST00000375661 HNRNPUL2Q1KMD3 747 aaKnown RBP20.38■□□□□ 0.85
LSM2-208ENST00000375661 RICTORQ6R327 1708 aa20.37■□□□□ 0.85
LSM2-208ENST00000375661 MADDQ8WXG6 1647 aa20.36■□□□□ 0.85
LSM2-208ENST00000375661 ARHGEF40Q8TER5 1519 aa20.36■□□□□ 0.85
LSM2-208ENST00000375661 DENND4BO75064 1496 aaPredicted RBP20.33■□□□□ 0.85
LSM2-208ENST00000375661 EFCAB5A4FU69 1503 aa20.32■□□□□ 0.84
LSM2-208ENST00000375661 PLEKHD1A6NEE1 506 aa20.32■□□□□ 0.84
LSM2-208ENST00000375661 FBXO41Q8TF61 875 aa20.32■□□□□ 0.84
LSM2-208ENST00000375661 FHOD3Q2V2M9 1422 aa20.32■□□□□ 0.84
LSM2-208ENST00000375661 PCF11O94913 1555 aaKnown RBP20.31■□□□□ 0.84
LSM2-208ENST00000375661 CHIC1Q5VXU3 224 aa20.31■□□□□ 0.84
LSM2-208ENST00000375661 AKNAQ7Z591 1439 aa20.3■□□□□ 0.84
LSM2-208ENST00000375661 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.3■□□□□ 0.843e-6■□□□□ 11.3
LSM2-208ENST00000375661 FANCAO15360 1455 aa20.3■□□□□ 0.84
LSM2-208ENST00000375661 ARID4BQ4LE39 1312 aaPredicted RBP20.29■□□□□ 0.84
LSM2-208ENST00000375661 ZMYM4Q5VZL5 1548 aa20.29■□□□□ 0.84
LSM2-208ENST00000375661 RIMS1Q86UR5 1692 aaKnown RBP20.29■□□□□ 0.84
LSM2-208ENST00000375661 LMTK3Q96Q04 1460 aa20.26■□□□□ 0.83
LSM2-208ENST00000375661 TTC37Q6PGP7 1564 aa20.25■□□□□ 0.83
LSM2-208ENST00000375661 POGZQ7Z3K3 1410 aa20.25■□□□□ 0.83
LSM2-208ENST00000375661 MAGI2Q86UL8 1455 aa20.24■□□□□ 0.83
LSM2-208ENST00000375661 ZFYVE16Q7Z3T8 1539 aa20.22■□□□□ 0.83
LSM2-208ENST00000375661 RANGAP1P46060 587 aaPredicted RBP20.22■□□□□ 0.83
LSM2-208ENST00000375661 HECW1Q76N89 1606 aa20.18■□□□□ 0.82
LSM2-208ENST00000375661 SIGLEC1Q9BZZ2 1709 aa20.18■□□□□ 0.82
LSM2-208ENST00000375661 FER1L4A9Z1Z3 1794 aa20.17■□□□□ 0.82
LSM2-208ENST00000375661 MYO5CQ9NQX4 1742 aa20.16■□□□□ 0.82
LSM2-208ENST00000375661 PLCH2O75038 1416 aa20.16■□□□□ 0.82
LSM2-208ENST00000375661 CDK13Q14004 1512 aaKnown RBP20.16■□□□□ 0.82
LSM2-208ENST00000375661 YEATS2Q9ULM3 1422 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms