RNA–Protein interactions for RNA: ENST00000375446.4

NINJ1-201, Transcript of ninjurin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NINJ1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-201ENST00000375446 ERCC6L2Q5T890 1561 aa36.73■■■■□ 3.47
NINJ1-201ENST00000375446 KIAA0586Q9BVV6 1533 aa36.72■■■■□ 3.47
NINJ1-201ENST00000375446 PRG4Q92954 1404 aaPredicted RBP36.68■■■■□ 3.46
NINJ1-201ENST00000375446 RAPGEF2Q9Y4G8 1499 aa36.68■■■■□ 3.46
NINJ1-201ENST00000375446 CHIC1Q5VXU3 224 aa36.59■■■■□ 3.45
NINJ1-201ENST00000375446 PRXQ9BXM0 1461 aa36.53■■■■□ 3.44
NINJ1-201ENST00000375446 CSRNP3Q8WYN3 585 aa36.49■■■■□ 3.43
NINJ1-201ENST00000375446 EEA1Q15075 1411 aa36.47■■■■□ 3.43
NINJ1-201ENST00000375446 IQGAP2Q13576 1575 aa36.46■■■■□ 3.43
NINJ1-201ENST00000375446 FAM9AQ8IZU1 332 aaPredicted RBP36.35■■■■□ 3.41
NINJ1-201ENST00000375446 CARMIL2Q6F5E8 1435 aa36.34■■■■□ 3.41
NINJ1-201ENST00000375446 UGGT2Q9NYU1 1516 aa36.29■■■■□ 3.4
NINJ1-201ENST00000375446 TRHP20396 242 aaPredicted RBP36.25■■■■□ 3.39
NINJ1-201ENST00000375446 TNIKQ9UKE5 1360 aa36.25■■■■□ 3.39
NINJ1-201ENST00000375446 DISP1Q96F81 1524 aa36.24■■■■□ 3.39
NINJ1-201ENST00000375446 CTTNBP2Q8WZ74 1663 aa36.24■■■■□ 3.39
NINJ1-201ENST00000375446 PTPRGP23470 1445 aa36.24■■■■□ 3.39
NINJ1-201ENST00000375446 TTBK1Q5TCY1 1321 aaPredicted RBP36.18■■■■□ 3.38
NINJ1-201ENST00000375446 KIAA0556O60303 1618 aa36.12■■■■□ 3.37
NINJ1-201ENST00000375446 ADCY10Q96PN6 1610 aa36.09■■■■□ 3.37
NINJ1-201ENST00000375446 GOLGA3Q08378 1498 aa36.08■■■■□ 3.37
NINJ1-201ENST00000375446 NPM1P06748 294 aaKnown RBP eCLIP36.08■■■■□ 3.37
NINJ1-201ENST00000375446 KIF21BO75037 1637 aa36.06■■■■□ 3.36
NINJ1-201ENST00000375446 UACAQ9BZF9 1416 aa35.98■■■■□ 3.35
NINJ1-201ENST00000375446 UHRF1BP1LA0JNW5 1464 aa35.94■■■■□ 3.34
NINJ1-201ENST00000375446 MAPKBP1O60336 1514 aa35.91■■■■□ 3.34
NINJ1-201ENST00000375446 ABCC2Q92887 1545 aa35.91■■■■□ 3.34
NINJ1-201ENST00000375446 EHMT2Q96KQ7 1210 aa35.89■■■■□ 3.34
NINJ1-201ENST00000375446 P3H3Q8IVL6 736 aa35.87■■■■□ 3.33
NINJ1-201ENST00000375446 UBTFP17480 764 aaKnown RBP35.84■■■■□ 3.33
NINJ1-201ENST00000375446 RANGAP1P46060 587 aaPredicted RBP35.84■■■■□ 3.33
NINJ1-201ENST00000375446 SAMD9Q5K651 1589 aa35.82■■■■□ 3.32
NINJ1-201ENST00000375446 PLB1Q6P1J6 1458 aa35.81■■■■□ 3.32
NINJ1-201ENST00000375446 ABCC10Q5T3U5 1492 aa35.78■■■■□ 3.32
NINJ1-201ENST00000375446 KDM5BQ9UGL1 1544 aa35.77■■■■□ 3.32
NINJ1-201ENST00000375446 FAM69CQ0P6D2 419 aa35.75■■■■□ 3.31
NINJ1-201ENST00000375446 ABCA8O94911 1581 aa35.74■■■■□ 3.31
NINJ1-201ENST00000375446 ASXL2Q76L83 1435 aa35.7■■■■□ 3.31
NINJ1-201ENST00000375446 KIF13AQ9H1H9 1805 aa35.69■■■■□ 3.3
NINJ1-201ENST00000375446 DIP2BQ9P265 1576 aa35.68■■■■□ 3.3
NINJ1-201ENST00000375446 EFCAB5A4FU69 1503 aa35.66■■■■□ 3.3
NINJ1-201ENST00000375446 FHOD3Q2V2M9 1422 aa35.66■■■■□ 3.3
NINJ1-201ENST00000375446 ZCCHC11Q5TAX3 1644 aaKnown RBP35.65■■■■□ 3.3
NINJ1-201ENST00000375446 RAPGEF6Q8TEU7 1601 aa35.51■■■■□ 3.28
NINJ1-201ENST00000375446 ARID3CA6NKF2 412 aa35.51■■■■□ 3.28
NINJ1-201ENST00000375446 ARHGAP35Q9NRY4 1499 aa35.49■■■■□ 3.27
NINJ1-201ENST00000375446 WDR7Q9Y4E6 1490 aa35.49■■■■□ 3.27
NINJ1-201ENST00000375446 ATP10BO94823 1461 aa35.48■■■■□ 3.27
NINJ1-201ENST00000375446 EPRSP07814 1512 aaKnown RBP35.48■■■■□ 3.27
NINJ1-201ENST00000375446 GLI2P10070 1586 aa35.47■■■■□ 3.27
NINJ1-201ENST00000375446 NUP153P49790 1475 aaKnown RBP35.42■■■■□ 3.26
NINJ1-201ENST00000375446 FMN1Q68DA7 1419 aa35.36■■■■□ 3.25
NINJ1-201ENST00000375446 KCNH8Q96L42 1107 aa35.36■■■■□ 3.25
NINJ1-201ENST00000375446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.35■■■■□ 3.25
NINJ1-201ENST00000375446 HNRNPUL2Q1KMD3 747 aaKnown RBP35.35■■■■□ 3.25
NINJ1-201ENST00000375446 TSPOAP1O95153 1857 aa35.33■■■■□ 3.25
NINJ1-201ENST00000375446 MAP3K4Q9Y6R4 1608 aa35.28■■■■□ 3.24
NINJ1-201ENST00000375446 CLIP1P30622 1438 aa35.24■■■■□ 3.23
NINJ1-201ENST00000375446 PPRC1Q5VV67 1664 aaKnown RBP35.23■■■■□ 3.23
NINJ1-201ENST00000375446 ATP1B4Q9UN42 357 aaPredicted RBP35.22■■■■□ 3.23
NINJ1-201ENST00000375446 CD109Q6YHK3 1445 aa35.2■■■■□ 3.23
NINJ1-201ENST00000375446 PLEKHD1A6NEE1 506 aa35.18■■■■□ 3.22
NINJ1-201ENST00000375446 TEX14Q8IWB6 1497 aa35.17■■■■□ 3.22
NINJ1-201ENST00000375446 HECW1Q76N89 1606 aa35.16■■■■□ 3.22
NINJ1-201ENST00000375446 CDK13Q14004 1512 aaKnown RBP35.15■■■■□ 3.22
NINJ1-201ENST00000375446 CFAP43Q8NDM7 1665 aa35.14■■■■□ 3.22
NINJ1-201ENST00000375446 KDM6BO15054 1643 aa35.14■■■■□ 3.22
NINJ1-201ENST00000375446 MAGI3Q5TCQ9 1506 aa35.11■■■■□ 3.21
NINJ1-201ENST00000375446 LOC105371045A0A1W2PR82 267 aa35.1■■■■□ 3.21
NINJ1-201ENST00000375446 CASKIN1Q8WXD9 1431 aa35.07■■■■□ 3.21
NINJ1-201ENST00000375446 ABCA9Q8IUA7 1624 aa35.07■■■■□ 3.21
NINJ1-201ENST00000375446 CEP162Q5TB80 1403 aa35.06■■■■□ 3.2
NINJ1-201ENST00000375446 PCF11O94913 1555 aaKnown RBP35.03■■■■□ 3.2
NINJ1-201ENST00000375446 CDK11AQ9UQ88 783 aaPredicted RBP35.01■■■■□ 3.2
NINJ1-201ENST00000375446 COL17A1Q9UMD9 1497 aaPredicted RBP34.99■■■■□ 3.19
NINJ1-201ENST00000375446 FYCO1Q9BQS8 1478 aa34.97■■■■□ 3.19
NINJ1-201ENST00000375446 CCDC18Q5T9S5 1454 aa34.93■■■■□ 3.18
NINJ1-201ENST00000375446 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.91■■■■□ 3.18
NINJ1-201ENST00000375446 LRRIQ1Q96JM4 1722 aa34.91■■■■□ 3.18
NINJ1-201ENST00000375446 TROQ12816 1431 aaPredicted RBP34.89■■■■□ 3.18
NINJ1-201ENST00000375446 PHLDB1Q86UU1 1377 aa34.87■■■■□ 3.17
NINJ1-201ENST00000375446 TTC37Q6PGP7 1564 aa34.85■■■■□ 3.17
NINJ1-201ENST00000375446 NEO1Q92859 1461 aa34.84■■■■□ 3.17
NINJ1-201ENST00000375446 ARAP3Q8WWN8 1544 aa34.81■■■■□ 3.16
NINJ1-201ENST00000375446 KIF14Q15058 1648 aa34.77■■■■□ 3.16
NINJ1-201ENST00000375446 PLCH2O75038 1416 aa34.74■■■■□ 3.15
NINJ1-201ENST00000375446 FANCAO15360 1455 aa34.74■■■■□ 3.15
NINJ1-201ENST00000375446 AKNAQ7Z591 1439 aa34.7■■■■□ 3.15
NINJ1-201ENST00000375446 CFAP74Q9C0B2 1584 aa34.67■■■■□ 3.14
NINJ1-201ENST00000375446 RAPGEF3O95398 923 aa34.67■■■■□ 3.14
NINJ1-201ENST00000375446 EFCAB2Q5VUJ9 269 aa34.64■■■■□ 3.14
NINJ1-201ENST00000375446 VPS8Q8N3P4 1428 aa34.64■■■■□ 3.14
NINJ1-201ENST00000375446 MYO5CQ9NQX4 1742 aa34.62■■■■□ 3.13
NINJ1-201ENST00000375446 DENND4BO75064 1496 aaPredicted RBP34.6■■■■□ 3.13
NINJ1-201ENST00000375446 MTUS2Q5JR59 1369 aa34.6■■■■□ 3.13
NINJ1-201ENST00000375446 ADGRL1O94910 1474 aa34.56■■■■□ 3.12
NINJ1-201ENST00000375446 ARHGAP5Q13017 1502 aa34.55■■■■□ 3.12
NINJ1-201ENST00000375446 FRMPD1Q5SYB0 1578 aa34.55■■■■□ 3.12
NINJ1-201ENST00000375446 SCAPERQ9BY12 1400 aa34.53■■■■□ 3.12
NINJ1-201ENST00000375446 AEBP2Q6ZN18 517 aaPredicted RBP34.51■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms