RNA–Protein interactions for RNA: ENST00000374847.5

TMEM246-201, Transcript of transmembrane protein 246, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TMEM246, Length 4,223 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM246-201ENST00000374847 DAXXQ9UER7 740 aaPredicted RBP14.28□□□□□ -0.12
TMEM246-201ENST00000374847 CUX2O14529 1486 aa14.28□□□□□ -0.12
TMEM246-201ENST00000374847 RGL3Q3MIN7 710 aa14.26□□□□□ -0.13
TMEM246-201ENST00000374847 MYT1Q01538 1121 aa14.25□□□□□ -0.13
TMEM246-201ENST00000374847 CARMIL1Q5VZK9 1371 aa14.23□□□□□ -0.13
TMEM246-201ENST00000374847 TDRD9Q8NDG6 1382 aaKnown RBP14.22□□□□□ -0.13
TMEM246-201ENST00000374847 FOXD1Q16676 465 aa14.22□□□□□ -0.13
TMEM246-201ENST00000374847 MRS2Q9HD23 443 aa14.22□□□□□ -0.13
TMEM246-201ENST00000374847 TSPY4P0CV99 314 aa14.22□□□□□ -0.13
TMEM246-201ENST00000374847 TSPY10P0CW01 314 aa14.22□□□□□ -0.13
TMEM246-201ENST00000374847 CCNB3Q8WWL7 1395 aa14.18□□□□□ -0.14
TMEM246-201ENST00000374847 NPM2Q86SE8 214 aaKnown RBP14.18□□□□□ -0.14
TMEM246-201ENST00000374847 RAPGEF2Q9Y4G8 1499 aa14.17□□□□□ -0.14
TMEM246-201ENST00000374847 VPS8Q8N3P4 1428 aa14.16□□□□□ -0.14
TMEM246-201ENST00000374847 CFDP1Q9UEE9 299 aaPredicted RBP14.16□□□□□ -0.14
TMEM246-201ENST00000374847 TMC1Q8TDI8 760 aa14.14□□□□□ -0.15
TMEM246-201ENST00000374847 EIF4G2P78344 907 aaKnown RBP eCLIP14.14□□□□□ -0.15
TMEM246-201ENST00000374847 PLEKHD1A6NEE1 506 aa14.12□□□□□ -0.15
TMEM246-201ENST00000374847 SLC24A1O60721 1099 aa14.12□□□□□ -0.15
TMEM246-201ENST00000374847 TOP2AP11388 1531 aaKnown RBP14.12□□□□□ -0.15
TMEM246-201ENST00000374847 EIF4G1Q04637 1599 aaKnown RBP14.1□□□□□ -0.15
TMEM246-201ENST00000374847 ATAD2BQ9ULI0 1458 aa14.09□□□□□ -0.15
TMEM246-201ENST00000374847 CANXP27824 592 aaKnown RBP14.09□□□□□ -0.15
TMEM246-201ENST00000374847 RTL5Q5HYW3 569 aaPredicted RBP14.07□□□□□ -0.16
TMEM246-201ENST00000374847 SUPT16HQ9Y5B9 1047 aaKnown RBP14.06□□□□□ -0.16
TMEM246-201ENST00000374847 SMARCA4P51532 1647 aa14.05□□□□□ -0.16
TMEM246-201ENST00000374847 NPM1P06748 294 aaKnown RBP eCLIP14.04□□□□□ -0.16
TMEM246-201ENST00000374847 FHOD3Q2V2M9 1422 aa14.04□□□□□ -0.16
TMEM246-201ENST00000374847 RAB3GAP2Q9H2M9 1393 aa14.04□□□□□ -0.16
TMEM246-201ENST00000374847 STAG3Q9UJ98 1225 aa14.03□□□□□ -0.16
TMEM246-201ENST00000374847 PLEKHG5O94827 1062 aa14.01□□□□□ -0.17
TMEM246-201ENST00000374847 ERCC6Q03468 1493 aa14.01□□□□□ -0.17
TMEM246-201ENST00000374847 CCDC136Q96JN2 1154 aa14□□□□□ -0.17
TMEM246-201ENST00000374847 SMARCA2P51531 1590 aa14□□□□□ -0.17
TMEM246-201ENST00000374847 CARD11Q9BXL7 1154 aa13.99□□□□□ -0.17
TMEM246-201ENST00000374847 CADPSQ9ULU8 1353 aa13.97□□□□□ -0.17
TMEM246-201ENST00000374847 FHAD1B1AJZ9 1412 aa13.96□□□□□ -0.17
TMEM246-201ENST00000374847 SETD5Q9C0A6 1442 aa13.95□□□□□ -0.18
TMEM246-201ENST00000374847 DCAF11Q8TEB1 546 aa13.95□□□□□ -0.18
TMEM246-201ENST00000374847 NBR1Q14596 966 aa13.94□□□□□ -0.18
TMEM246-201ENST00000374847 HSPA5P11021 654 aaKnown RBP13.93□□□□□ -0.18
TMEM246-201ENST00000374847 TNNT2P45379 298 aaPredicted RBP13.93□□□□□ -0.18
TMEM246-201ENST00000374847 ESF1Q9H501 851 aaKnown RBP13.93□□□□□ -0.18
TMEM246-201ENST00000374847 CC2D1BQ5T0F9 858 aaKnown RBP13.91□□□□□ -0.18
TMEM246-201ENST00000374847 NEUROD2Q15784 382 aa13.91□□□□□ -0.18
TMEM246-201ENST00000374847 PKD2Q13563 968 aa13.9□□□□□ -0.18
TMEM246-201ENST00000374847 WDR43Q15061 677 aaKnown RBP eCLIP13.9□□□□□ -0.18
TMEM246-201ENST00000374847 ANP32AP39687 249 aaKnown RBP13.9□□□□□ -0.18
TMEM246-201ENST00000374847 ARHGAP35Q9NRY4 1499 aa13.89□□□□□ -0.19
TMEM246-201ENST00000374847 B4GALNT3Q6L9W6 998 aa13.88□□□□□ -0.19
TMEM246-201ENST00000374847 DHX57Q6P158 1386 aaKnown RBP13.88□□□□□ -0.19
TMEM246-201ENST00000374847 RAD54L2Q9Y4B4 1467 aa13.87□□□□□ -0.19
TMEM246-201ENST00000374847 MPHOSPH9Q99550 1183 aa13.87□□□□□ -0.19
TMEM246-201ENST00000374847 L3MBTL2Q969R5 705 aa13.86□□□□□ -0.19
TMEM246-201ENST00000374847 DNAJC5BQ9UF47 199 aa13.86□□□□□ -0.19
TMEM246-201ENST00000374847 PPP1R15AO75807 674 aaPredicted RBP13.86□□□□□ -0.19
TMEM246-201ENST00000374847 NEFMP07197 916 aa13.85□□□□□ -0.19
TMEM246-201ENST00000374847 IGF1RP08069 1367 aa13.84□□□□□ -0.19
TMEM246-201ENST00000374847 SAFB2Q14151 953 aaKnown RBP eCLIP13.84□□□□□ -0.19
TMEM246-201ENST00000374847 HNRNPMP52272 730 aaKnown RBP eCLIP13.84□□□□□ -0.19
TMEM246-201ENST00000374847 PPM1GO15355 546 aaPredicted RBP13.83□□□□□ -0.2
TMEM246-201ENST00000374847 FANCD2Q9BXW9 1451 aa13.81□□□□□ -0.2
TMEM246-201ENST00000374847 PDS5BQ9NTI5 1447 aa13.81□□□□□ -0.2
TMEM246-201ENST00000374847 ZNF644Q9H582 1327 aaPredicted RBP13.81□□□□□ -0.2
TMEM246-201ENST00000374847 ARXQ96QS3 562 aa13.8□□□□□ -0.2
TMEM246-201ENST00000374847 ZBTB47Q9UFB7 747 aaPredicted RBP13.8□□□□□ -0.2
TMEM246-201ENST00000374847 MLECQ14165 292 aa13.79□□□□□ -0.2
TMEM246-201ENST00000374847 GGT6Q6P531 493 aa13.78□□□□□ -0.2
TMEM246-201ENST00000374847 KNSTRNQ9Y448 316 aa13.78□□□□□ -0.2
TMEM246-201ENST00000374847 FGD5Q6ZNL6 1462 aa13.78□□□□□ -0.2
TMEM246-201ENST00000374847 FMN1Q68DA7 1419 aa13.77□□□□□ -0.21
TMEM246-201ENST00000374847 NUP155O75694 1391 aa13.77□□□□□ -0.21
TMEM246-201ENST00000374847 SYNJ1O43426 1573 aa13.77□□□□□ -0.21
TMEM246-201ENST00000374847 JPH4Q96JJ6 628 aa13.76□□□□□ -0.21
TMEM246-201ENST00000374847 PHLDB1Q86UU1 1377 aa13.75□□□□□ -0.21
TMEM246-201ENST00000374847 NUTM2DQ5VT03 806 aaPredicted RBP13.75□□□□□ -0.21
TMEM246-201ENST00000374847 NESP48681 1621 aa13.74□□□□□ -0.21
TMEM246-201ENST00000374847 ZBTB7CA1YPR0 619 aa13.74□□□□□ -0.21
TMEM246-201ENST00000374847 ARAP1Q96P48 1450 aa13.73□□□□□ -0.21
TMEM246-201ENST00000374847 KIF21BO75037 1637 aa13.72□□□□□ -0.21
TMEM246-201ENST00000374847 ARID4BQ4LE39 1312 aaPredicted RBP13.71□□□□□ -0.21
TMEM246-201ENST00000374847 SOX12O15370 315 aa13.7□□□□□ -0.22
TMEM246-201ENST00000374847 C14orf37Q86TY3 774 aa13.7□□□□□ -0.22
TMEM246-201ENST00000374847 AQRO60306 1485 aaKnown RBP eCLIP13.7□□□□□ -0.22
TMEM246-201ENST00000374847 RGS3P49796 1198 aa13.69□□□□□ -0.22
TMEM246-201ENST00000374847 STK26Q9P289 416 aa13.69□□□□□ -0.22
TMEM246-201ENST00000374847 FRAT1Q92837 279 aaPredicted RBP13.69□□□□□ -0.22
TMEM246-201ENST00000374847 TIMELESSQ9UNS1 1208 aa13.68□□□□□ -0.22
TMEM246-201ENST00000374847 LAS1LQ9Y4W2 734 aaKnown RBP13.67□□□□□ -0.22
TMEM246-201ENST00000374847 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.66□□□□□ -0.22
TMEM246-201ENST00000374847 ST20-MTHFSA0A0A6YYL1 179 aa13.66□□□□□ -0.22
TMEM246-201ENST00000374847 KIF3BO15066 747 aa13.65□□□□□ -0.22
TMEM246-201ENST00000374847 U2SURPO15042 1029 aaKnown RBP13.65□□□□□ -0.22
TMEM246-201ENST00000374847 CCER2I3L3R5 266 aa13.64□□□□□ -0.23
TMEM246-201ENST00000374847 PPP4R2Q9NY27 417 aa13.63□□□□□ -0.23
TMEM246-201ENST00000374847 NCAPD3P42695 1498 aa13.63□□□□□ -0.23
TMEM246-201ENST00000374847 CARMIL2Q6F5E8 1435 aa13.63□□□□□ -0.23
TMEM246-201ENST00000374847 HSP90AA1P07900 732 aaKnown RBP13.63□□□□□ -0.23
TMEM246-201ENST00000374847 POGKQ9P215 609 aa13.63□□□□□ -0.23
TMEM246-201ENST00000374847 TMF1P82094 1093 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms