RNA–Protein interactions for RNA: ENST00000374825.8

BRD2-201, Transcript of bromodomain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene BRD2, Length 4,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2-201ENST00000374825 CCER2I3L3R5 266 aa22.31■■□□□ 1.16
BRD2-201ENST00000374825 ARXQ96QS3 562 aa22.31■■□□□ 1.16
BRD2-201ENST00000374825 RTN4Q9NQC3 1192 aaKnown RBP22.29■■□□□ 1.16
BRD2-201ENST00000374825 TRIM44Q96DX7 344 aaPredicted RBP22.25■■□□□ 1.15
BRD2-201ENST00000374825 TIMELESSQ9UNS1 1208 aa22.23■■□□□ 1.15
BRD2-201ENST00000374825 WDR43Q15061 677 aaKnown RBP eCLIP22.21■■□□□ 1.15
BRD2-201ENST00000374825 LAS1LQ9Y4W2 734 aaKnown RBP22.21■■□□□ 1.15
BRD2-201ENST00000374825 B4GALNT3Q6L9W6 998 aa22.2■■□□□ 1.14
BRD2-201ENST00000374825 CHIC2Q9UKJ5 165 aa22.18■■□□□ 1.14
BRD2-201ENST00000374825 ZNF777Q9ULD5 760 aaPredicted RBP22.18■■□□□ 1.14
BRD2-201ENST00000374825 ARID3CA6NKF2 412 aa22.14■■□□□ 1.14
BRD2-201ENST00000374825 MTUS2Q5JR59 1369 aa22.14■■□□□ 1.13
BRD2-201ENST00000374825 CEP164Q9UPV0 1460 aa22.13■■□□□ 1.13
BRD2-201ENST00000374825 NAP1L5Q96NT1 182 aaPredicted RBP22.09■■□□□ 1.13
BRD2-201ENST00000374825 SIN3AQ96ST3 1273 aa22.09■■□□□ 1.13
BRD2-201ENST00000374825 GOLGA6L22H0YM25 854 aa22.07■■□□□ 1.12
BRD2-201ENST00000374825 TNNT2P45379 298 aaPredicted RBP22.06■■□□□ 1.12
BRD2-201ENST00000374825 RB1CC1Q8TDY2 1594 aa22.02■■□□□ 1.12
BRD2-201ENST00000374825 CCNB3Q8WWL7 1395 aa22■■□□□ 1.11
BRD2-201ENST00000374825 WRNQ14191 1432 aaPredicted RBP eCLIP22■■□□□ 1.11
BRD2-201ENST00000374825 KDM2AQ9Y2K7 1162 aa21.98■■□□□ 1.11
BRD2-201ENST00000374825 RRP7BPQ9NSQ0 103 aa21.98■■□□□ 1.11
BRD2-201ENST00000374825 L1TD1Q5T7N2 865 aaKnown RBP21.97■■□□□ 1.11
BRD2-201ENST00000374825 IPO9Q96P70 1041 aaKnown RBP21.93■■□□□ 1.1
BRD2-201ENST00000374825 TCERG1O14776 1098 aaKnown RBP21.89■■□□□ 1.09
BRD2-201ENST00000374825 VPS8Q8N3P4 1428 aa21.88■■□□□ 1.09
BRD2-201ENST00000374825 FANCIQ9NVI1 1328 aa21.88■■□□□ 1.09
BRD2-201ENST00000374825 TSPY4P0CV99 314 aa21.88■■□□□ 1.09
BRD2-201ENST00000374825 TSPY10P0CW01 314 aa21.88■■□□□ 1.09
BRD2-201ENST00000374825 FBLN2P98095 1184 aa21.88■■□□□ 1.09
BRD2-201ENST00000374825 RGS3P49796 1198 aa21.88■■□□□ 1.09
BRD2-201ENST00000374825 NCLP19338 710 aaKnown RBP21.86■■□□□ 1.09
BRD2-201ENST00000374825 SENP3-EIF4A1A0A087X0R7 540 aa21.86■■□□□ 1.09
BRD2-201ENST00000374825 SLC24A1O60721 1099 aa21.86■■□□□ 1.09
BRD2-201ENST00000374825 MYH16Q9H6N6 1097 aa21.85■■□□□ 1.09
BRD2-201ENST00000374825 USP35Q9P2H5 1018 aa21.84■■□□□ 1.09
BRD2-201ENST00000374825 SETD5Q9C0A6 1442 aa21.82■■□□□ 1.08
BRD2-201ENST00000374825 PTMAP06454 111 aaKnown RBP21.81■■□□□ 1.08
BRD2-201ENST00000374825 CARD11Q9BXL7 1154 aa21.79■■□□□ 1.08
BRD2-201ENST00000374825 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.78■■□□□ 1.08
BRD2-201ENST00000374825 SOGA1O94964 1423 aa21.78■■□□□ 1.08
BRD2-201ENST00000374825 DNTTIP2Q5QJE6 756 aaKnown RBP21.78■■□□□ 1.08
BRD2-201ENST00000374825 KIF27Q86VH2 1401 aa21.77■■□□□ 1.07
BRD2-201ENST00000374825 CDCA8Q53HL2 280 aa21.75■■□□□ 1.07
BRD2-201ENST00000374825 KNSTRNQ9Y448 316 aa21.75■■□□□ 1.07
BRD2-201ENST00000374825 PNNQ9H307 717 aaKnown RBP21.74■■□□□ 1.07
BRD2-201ENST00000374825 HSPA5P11021 654 aaKnown RBP21.74■■□□□ 1.07
BRD2-201ENST00000374825 PPP1R15AO75807 674 aaPredicted RBP21.73■■□□□ 1.07
BRD2-201ENST00000374825 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.73■■□□□ 1.071e-7■■□□□ 13.6
BRD2-201ENST00000374825 CHGAP10645 457 aaKnown RBP21.69■■□□□ 1.06
BRD2-201ENST00000374825 NUDCQ9Y266 331 aa21.68■■□□□ 1.06
BRD2-201ENST00000374825 RAB3GAP2Q9H2M9 1393 aa21.68■■□□□ 1.06
BRD2-201ENST00000374825 FTSJ3Q8IY81 847 aaKnown RBP21.67■■□□□ 1.06
BRD2-201ENST00000374825 FHAD1B1AJZ9 1412 aa21.67■■□□□ 1.06
BRD2-201ENST00000374825 MSNP26038 577 aaKnown RBP21.67■■□□□ 1.06
BRD2-201ENST00000374825 RCAN3Q9UKA8 241 aa21.67■■□□□ 1.06
BRD2-201ENST00000374825 RSPH6AQ9H0K4 717 aa21.66■■□□□ 1.06
BRD2-201ENST00000374825 HSP90AB1P08238 724 aaKnown RBP21.64■■□□□ 1.06
BRD2-201ENST00000374825 MS4A1P11836 297 aa21.64■■□□□ 1.06
BRD2-201ENST00000374825 HSCBQ8IWL3 235 aa21.64■■□□□ 1.05
BRD2-201ENST00000374825 CFAP53Q96M91 514 aa21.63■■□□□ 1.05
BRD2-201ENST00000374825 KCNH8Q96L42 1107 aa21.63■■□□□ 1.05
BRD2-201ENST00000374825 KANK4Q5T7N3 995 aaPredicted RBP21.63■■□□□ 1.05
BRD2-201ENST00000374825 DHX57Q6P158 1386 aaKnown RBP21.61■■□□□ 1.05
BRD2-201ENST00000374825 CASC1Q6TDU7 716 aa21.61■■□□□ 1.05
BRD2-201ENST00000374825 FRAT1Q92837 279 aaPredicted RBP21.59■■□□□ 1.05
BRD2-201ENST00000374825 RGL3Q3MIN7 710 aa21.58■■□□□ 1.05
BRD2-201ENST00000374825 CHMP4BQ9H444 224 aaKnown RBP21.57■■□□□ 1.04
BRD2-201ENST00000374825 PTMSP20962 102 aa21.57■■□□□ 1.04
BRD2-201ENST00000374825 GSE1Q14687 1217 aa21.56■■□□□ 1.04
BRD2-201ENST00000374825 BAZ1AQ9NRL2 1556 aaPredicted RBP21.56■■□□□ 1.04
BRD2-201ENST00000374825 CDK11BP21127 795 aaKnown RBP21.55■■□□□ 1.04
BRD2-201ENST00000374825 GOLGA6L3A6NEY3 463 aa21.55■■□□□ 1.04
BRD2-201ENST00000374825 CC2D1BQ5T0F9 858 aaKnown RBP21.53■■□□□ 1.04
BRD2-201ENST00000374825 RALBP1Q15311 655 aa21.52■■□□□ 1.04
BRD2-201ENST00000374825 PDE3BQ13370 1112 aa21.52■■□□□ 1.04
BRD2-201ENST00000374825 CCDC88BA6NC98 1476 aa21.52■■□□□ 1.04
BRD2-201ENST00000374825 GBP4Q96PP9 640 aa21.51■■□□□ 1.03
BRD2-201ENST00000374825 CECR2Q9BXF3 1484 aa21.51■■□□□ 1.03
BRD2-201ENST00000374825 CFDP1Q9UEE9 299 aaPredicted RBP21.5■■□□□ 1.03
BRD2-201ENST00000374825 SLKQ9H2G2 1235 aaPredicted RBP21.5■■□□□ 1.03
BRD2-201ENST00000374825 NEUROD2Q15784 382 aa21.5■■□□□ 1.03
BRD2-201ENST00000374825 CHAF1AQ13111 956 aaPredicted RBP21.49■■□□□ 1.03
BRD2-201ENST00000374825 HSP90AA2PQ14568 343 aaPredicted RBP21.49■■□□□ 1.03
BRD2-201ENST00000374825 PDE4AP27815 886 aa21.48■■□□□ 1.03
BRD2-201ENST00000374825 ZBED9Q6R2W3 1325 aa21.47■■□□□ 1.03
BRD2-201ENST00000374825 KTN1Q86UP2 1357 aaKnown RBP21.46■■□□□ 1.03
BRD2-201ENST00000374825 TMF1P82094 1093 aa21.46■■□□□ 1.03
BRD2-201ENST00000374825 ARHGAP35Q9NRY4 1499 aa21.46■■□□□ 1.03
BRD2-201ENST00000374825 GZF1Q9H116 711 aaPredicted RBP21.45■■□□□ 1.02
BRD2-201ENST00000374825 SPRYD3Q8NCJ5 442 aa21.44■■□□□ 1.02
BRD2-201ENST00000374825 ARID4BQ4LE39 1312 aaPredicted RBP21.44■■□□□ 1.02
BRD2-201ENST00000374825 CFAP44Q96MT7 982 aa21.44■■□□□ 1.02
BRD2-201ENST00000374825 PLCB2Q00722 1185 aa21.43■■□□□ 1.02
BRD2-201ENST00000374825 PLEKHD1A6NEE1 506 aa21.42■■□□□ 1.02
BRD2-201ENST00000374825 NACADO15069 1562 aa21.42■■□□□ 1.02
BRD2-201ENST00000374825 STAG3Q9UJ98 1225 aa21.41■■□□□ 1.02
BRD2-201ENST00000374825 ZRSR1Q15695 479 aaKnown RBP21.4■■□□□ 1.02
BRD2-201ENST00000374825 MAPK8IP3Q9UPT6 1336 aa21.4■■□□□ 1.02
BRD2-201ENST00000374825 ABCC8Q09428 1581 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms