RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 LOC105371045A0A1W2PR82 267 aa22.02■■□□□ 1.12
A1CF-202ENST00000373993 CENPBP07199 599 aaPredicted RBP22.02■■□□□ 1.12
A1CF-202ENST00000373993 ERICH3Q5RHP9 1530 aa22.01■■□□□ 1.11
A1CF-202ENST00000373993 FHAD1B1AJZ9 1412 aa21.99■■□□□ 1.11
A1CF-202ENST00000373993 CEP170Q5SW79 1584 aa21.97■■□□□ 1.11
A1CF-202ENST00000373993 NUP160Q12769 1436 aa21.91■■□□□ 1.1
A1CF-202ENST00000373993 ERCC6L2Q5T890 1561 aa21.88■■□□□ 1.09
A1CF-202ENST00000373993 KIF27Q86VH2 1401 aa21.87■■□□□ 1.09
A1CF-202ENST00000373993 NEUROD1Q13562 356 aa21.85■■□□□ 1.09
A1CF-202ENST00000373993 TRHP20396 242 aaPredicted RBP21.82■■□□□ 1.08
A1CF-202ENST00000373993 IGF1RP08069 1367 aa21.8■■□□□ 1.08
A1CF-202ENST00000373993 SHROOM2Q13796 1616 aa21.79■■□□□ 1.08
A1CF-202ENST00000373993 CUL7Q14999 1698 aa21.78■■□□□ 1.08
A1CF-202ENST00000373993 GTF3C3Q9Y5Q9 886 aa21.78■■□□□ 1.08
A1CF-202ENST00000373993 RUSC2Q8N2Y8 1516 aa21.77■■□□□ 1.08
A1CF-202ENST00000373993 PRG4Q92954 1404 aaPredicted RBP21.73■■□□□ 1.07
A1CF-202ENST00000373993 JPH4Q96JJ6 628 aa21.72■■□□□ 1.07
A1CF-202ENST00000373993 CARMIL1Q5VZK9 1371 aa21.69■■□□□ 1.06
A1CF-202ENST00000373993 KIAA0586Q9BVV6 1533 aa21.63■■□□□ 1.05
A1CF-202ENST00000373993 DIEXFQ68CQ4 756 aaKnown RBP21.6■■□□□ 1.05
A1CF-202ENST00000373993 RAPGEF2Q9Y4G8 1499 aa21.52■■□□□ 1.04
A1CF-202ENST00000373993 IQGAP2Q13576 1575 aa21.52■■□□□ 1.04
A1CF-202ENST00000373993 CLSPNQ9HAW4 1339 aa21.51■■□□□ 1.03
A1CF-202ENST00000373993 ADCY10Q96PN6 1610 aa21.46■■□□□ 1.03
A1CF-202ENST00000373993 CARMIL2Q6F5E8 1435 aa21.43■■□□□ 1.02
A1CF-202ENST00000373993 NPM1P06748 294 aaKnown RBP eCLIP21.42■■□□□ 1.02
A1CF-202ENST00000373993 PTPRGP23470 1445 aa21.41■■□□□ 1.02
A1CF-202ENST00000373993 CTTNBP2Q8WZ74 1663 aa21.4■■□□□ 1.02
A1CF-202ENST00000373993 CCER1Q8TC90 406 aaPredicted RBP21.39■■□□□ 1.01
A1CF-202ENST00000373993 KIF13AQ9H1H9 1805 aa21.39■■□□□ 1.01
A1CF-202ENST00000373993 TNIKQ9UKE5 1360 aa21.38■■□□□ 1.01
A1CF-202ENST00000373993 DISP1Q96F81 1524 aa21.37■■□□□ 1.01
A1CF-202ENST00000373993 PRXQ9BXM0 1461 aa21.34■■□□□ 1.01
A1CF-202ENST00000373993 UGGT2Q9NYU1 1516 aa21.34■■□□□ 1.01
A1CF-202ENST00000373993 KIAA0556O60303 1618 aa21.32■■□□□ 1
A1CF-202ENST00000373993 MAPKBP1O60336 1514 aa21.32■■□□□ 1
A1CF-202ENST00000373993 FAM69CQ0P6D2 419 aa21.3■■□□□ 1
A1CF-202ENST00000373993 FAM9AQ8IZU1 332 aaPredicted RBP21.3■■□□□ 1
A1CF-202ENST00000373993 ZNF316A6NFI3 1004 aaPredicted RBP21.28■■□□□ 1
A1CF-202ENST00000373993 ABCC10Q5T3U5 1492 aa21.27■■□□□ 1
A1CF-202ENST00000373993 CSRNP3Q8WYN3 585 aa21.27■■□□□ 1
A1CF-202ENST00000373993 DIP2BQ9P265 1576 aa21.27■■□□□ 1
A1CF-202ENST00000373993 ABCC2Q92887 1545 aa21.25■□□□□ 0.99
A1CF-202ENST00000373993 UACAQ9BZF9 1416 aa21.24■□□□□ 0.99
A1CF-202ENST00000373993 TSPOAP1O95153 1857 aa21.22■□□□□ 0.99
A1CF-202ENST00000373993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.21■□□□□ 0.99
A1CF-202ENST00000373993 GOLGA3Q08378 1498 aa21.2■□□□□ 0.98
A1CF-202ENST00000373993 UHRF1BP1LA0JNW5 1464 aa21.19■□□□□ 0.98
A1CF-202ENST00000373993 EEA1Q15075 1411 aa21.19■□□□□ 0.98
A1CF-202ENST00000373993 ASXL2Q76L83 1435 aa21.18■□□□□ 0.98
A1CF-202ENST00000373993 RANGAP1P46060 587 aaPredicted RBP21.17■□□□□ 0.98
A1CF-202ENST00000373993 P3H3Q8IVL6 736 aa21.17■□□□□ 0.98
A1CF-202ENST00000373993 PLB1Q6P1J6 1458 aa21.17■□□□□ 0.98
A1CF-202ENST00000373993 ZCCHC11Q5TAX3 1644 aaKnown RBP21.16■□□□□ 0.98
A1CF-202ENST00000373993 EHMT2Q96KQ7 1210 aa21.15■□□□□ 0.98
A1CF-202ENST00000373993 KDM5BQ9UGL1 1544 aa21.12■□□□□ 0.97
A1CF-202ENST00000373993 ARID3CA6NKF2 412 aa21.08■□□□□ 0.96
A1CF-202ENST00000373993 ABCA8O94911 1581 aa21.07■□□□□ 0.96
A1CF-202ENST00000373993 ANP32EQ9BTT0 268 aa21.06■□□□□ 0.96
A1CF-202ENST00000373993 KIF21BO75037 1637 aa21.05■□□□□ 0.96
A1CF-202ENST00000373993 SAMD9Q5K651 1589 aa21.05■□□□□ 0.96
A1CF-202ENST00000373993 KDM6BO15054 1643 aa21.05■□□□□ 0.96
A1CF-202ENST00000373993 EPRSP07814 1512 aaKnown RBP21.03■□□□□ 0.96
A1CF-202ENST00000373993 GLI2P10070 1586 aa21.02■□□□□ 0.96
A1CF-202ENST00000373993 PPRC1Q5VV67 1664 aaKnown RBP21.01■□□□□ 0.95
A1CF-202ENST00000373993 WDR7Q9Y4E6 1490 aa21■□□□□ 0.95
A1CF-202ENST00000373993 KCNH8Q96L42 1107 aa20.98■□□□□ 0.95
A1CF-202ENST00000373993 FHOD3Q2V2M9 1422 aa20.98■□□□□ 0.95
A1CF-202ENST00000373993 MAP3K4Q9Y6R4 1608 aa20.97■□□□□ 0.95
A1CF-202ENST00000373993 UBTFP17480 764 aaKnown RBP20.97■□□□□ 0.95
A1CF-202ENST00000373993 RAPGEF6Q8TEU7 1601 aa20.95■□□□□ 0.94
A1CF-202ENST00000373993 BCL11AQ9H165 835 aa20.95■□□□□ 0.94
A1CF-202ENST00000373993 AEBP2Q6ZN18 517 aaPredicted RBP20.94■□□□□ 0.94
A1CF-202ENST00000373993 HNRNPUL2Q1KMD3 747 aaKnown RBP20.92■□□□□ 0.94
A1CF-202ENST00000373993 ATP10BO94823 1461 aa20.9■□□□□ 0.94
A1CF-202ENST00000373993 MIER1Q8N108 512 aa20.9■□□□□ 0.94
A1CF-202ENST00000373993 EFCAB5A4FU69 1503 aa20.88■□□□□ 0.93
A1CF-202ENST00000373993 TEX14Q8IWB6 1497 aa20.88■□□□□ 0.93
A1CF-202ENST00000373993 CFAP43Q8NDM7 1665 aa20.86■□□□□ 0.93
A1CF-202ENST00000373993 CD109Q6YHK3 1445 aa20.85■□□□□ 0.93
A1CF-202ENST00000373993 NUP153P49790 1475 aaKnown RBP20.85■□□□□ 0.93
A1CF-202ENST00000373993 COL17A1Q9UMD9 1497 aaPredicted RBP20.83■□□□□ 0.92
A1CF-202ENST00000373993 SUPT16HQ9Y5B9 1047 aaKnown RBP20.81■□□□□ 0.92
A1CF-202ENST00000373993 YTHDC1Q96MU7 727 aaKnown RBP20.79■□□□□ 0.92
A1CF-202ENST00000373993 ATP1B4Q9UN42 357 aaPredicted RBP20.77■□□□□ 0.92
A1CF-202ENST00000373993 MAGI3Q5TCQ9 1506 aa20.77■□□□□ 0.92
A1CF-202ENST00000373993 TSHZ2Q9NRE2 1034 aa20.77■□□□□ 0.92
A1CF-202ENST00000373993 ARHGAP35Q9NRY4 1499 aa20.76■□□□□ 0.91
A1CF-202ENST00000373993 ABCA9Q8IUA7 1624 aa20.74■□□□□ 0.91
A1CF-202ENST00000373993 CDK13Q14004 1512 aaKnown RBP20.73■□□□□ 0.91
A1CF-202ENST00000373993 CEP162Q5TB80 1403 aa20.71■□□□□ 0.91
A1CF-202ENST00000373993 PLEKHD1A6NEE1 506 aa20.7■□□□□ 0.9
A1CF-202ENST00000373993 FMN1Q68DA7 1419 aa20.7■□□□□ 0.9
A1CF-202ENST00000373993 HECW1Q76N89 1606 aa20.68■□□□□ 0.9
A1CF-202ENST00000373993 KDM4FA0A1W2PPD8 638 aa20.67■□□□□ 0.9
A1CF-202ENST00000373993 TTC37Q6PGP7 1564 aa20.62■□□□□ 0.89
A1CF-202ENST00000373993 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.62■□□□□ 0.89
A1CF-202ENST00000373993 LRRIQ1Q96JM4 1722 aa20.6■□□□□ 0.89
A1CF-202ENST00000373993 ADGRL1O94910 1474 aa20.6■□□□□ 0.89
A1CF-202ENST00000373993 ARAP3Q8WWN8 1544 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 266.7 ms