RNA–Protein interactions for RNA: ENST00000373910.8

UBE2D1-201, Transcript of ubiquitin conjugating enzyme E2 D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D1, Length 2,659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D1-201ENST00000373910 ERCC6Q03468 1493 aa22.86■■□□□ 1.25
UBE2D1-201ENST00000373910 HNRNPUL2Q1KMD3 747 aaKnown RBP22.82■■□□□ 1.24
UBE2D1-201ENST00000373910 WDR62O43379 1518 aa22.81■■□□□ 1.24
UBE2D1-201ENST00000373910 ZNF608Q9ULD9 1512 aaPredicted RBP22.8■■□□□ 1.24
UBE2D1-201ENST00000373910 CCER1Q8TC90 406 aaPredicted RBP22.79■■□□□ 1.24
UBE2D1-201ENST00000373910 CTTNBP2Q8WZ74 1663 aa22.79■■□□□ 1.24
UBE2D1-201ENST00000373910 FHOD3Q2V2M9 1422 aa22.79■■□□□ 1.24
UBE2D1-201ENST00000373910 PBRM1Q86U86 1689 aa22.77■■□□□ 1.24
UBE2D1-201ENST00000373910 ATP1B4Q9UN42 357 aaPredicted RBP22.75■■□□□ 1.23
UBE2D1-201ENST00000373910 IFT140Q96RY7 1462 aa22.73■■□□□ 1.23
UBE2D1-201ENST00000373910 THOC2Q8NI27 1593 aaKnown RBP22.7■■□□□ 1.22
UBE2D1-201ENST00000373910 GRIN2BQ13224 1484 aa22.69■■□□□ 1.22
UBE2D1-201ENST00000373910 FHAD1B1AJZ9 1412 aa22.68■■□□□ 1.22
UBE2D1-201ENST00000373910 PCF11O94913 1555 aaKnown RBP22.67■■□□□ 1.22
UBE2D1-201ENST00000373910 EFCAB5A4FU69 1503 aa22.66■■□□□ 1.22
UBE2D1-201ENST00000373910 ADAMTS12P58397 1594 aa22.65■■□□□ 1.22
UBE2D1-201ENST00000373910 TIAM1Q13009 1591 aa22.65■■□□□ 1.22
UBE2D1-201ENST00000373910 EIF4G3O43432 1585 aaKnown RBP22.61■■□□□ 1.21
UBE2D1-201ENST00000373910 MYT1Q01538 1121 aa22.61■■□□□ 1.21
UBE2D1-201ENST00000373910 SNAPC4Q5SXM2 1469 aa22.59■■□□□ 1.21
UBE2D1-201ENST00000373910 ACIN1Q9UKV3 1341 aaKnown RBP22.58■■□□□ 1.21
UBE2D1-201ENST00000373910 SAMD9Q5K651 1589 aa22.57■■□□□ 1.2
UBE2D1-201ENST00000373910 LRRC9Q6ZRR7 1453 aa22.57■■□□□ 1.2
UBE2D1-201ENST00000373910 NEUROD1Q13562 356 aa22.56■■□□□ 1.2
UBE2D1-201ENST00000373910 MAP3K1Q13233 1512 aa22.56■■□□□ 1.2
UBE2D1-201ENST00000373910 CASKIN1Q8WXD9 1431 aa22.55■■□□□ 1.2
UBE2D1-201ENST00000373910 FMN1Q68DA7 1419 aa22.54■■□□□ 1.2
UBE2D1-201ENST00000373910 RRBP1Q9P2E9 1410 aaKnown RBP22.54■■□□□ 1.2
UBE2D1-201ENST00000373910 FYCO1Q9BQS8 1478 aa22.54■■□□□ 1.2
UBE2D1-201ENST00000373910 ITGAEP38570 1179 aa22.51■■□□□ 1.19
UBE2D1-201ENST00000373910 IQGAP2Q13576 1575 aa22.51■■□□□ 1.19
UBE2D1-201ENST00000373910 CFAP43Q8NDM7 1665 aa22.51■■□□□ 1.19
UBE2D1-201ENST00000373910 CCNB3Q8WWL7 1395 aa22.5■■□□□ 1.19
UBE2D1-201ENST00000373910 PHLDB1Q86UU1 1377 aa22.48■■□□□ 1.19
UBE2D1-201ENST00000373910 FBLN2P98095 1184 aa22.48■■□□□ 1.19
UBE2D1-201ENST00000373910 GRIN2AQ12879 1464 aa22.45■■□□□ 1.19
UBE2D1-201ENST00000373910 CHMP7Q8WUX9 453 aaPredicted RBP22.45■■□□□ 1.18
UBE2D1-201ENST00000373910 LRRIQ1Q96JM4 1722 aa22.43■■□□□ 1.18
UBE2D1-201ENST00000373910 GTF3C3Q9Y5Q9 886 aa22.43■■□□□ 1.18
UBE2D1-201ENST00000373910 MAGI1Q96QZ7 1491 aaPredicted RBP22.4■■□□□ 1.18
UBE2D1-201ENST00000373910 KIAA0586Q9BVV6 1533 aa22.39■■□□□ 1.18
UBE2D1-201ENST00000373910 ARID3CA6NKF2 412 aa22.38■■□□□ 1.17
UBE2D1-201ENST00000373910 FAM50AQ14320 339 aaKnown RBP22.38■■□□□ 1.17
UBE2D1-201ENST00000373910 SYNJ2O15056 1496 aa22.36■■□□□ 1.17
UBE2D1-201ENST00000373910 UGGT2Q9NYU1 1516 aa22.36■■□□□ 1.17
UBE2D1-201ENST00000373910 MTUS2Q5JR59 1369 aa22.36■■□□□ 1.17
UBE2D1-201ENST00000373910 CEP170Q5SW79 1584 aa22.33■■□□□ 1.17
UBE2D1-201ENST00000373910 DISP1Q96F81 1524 aa22.32■■□□□ 1.16
UBE2D1-201ENST00000373910 KIAA0556O60303 1618 aa22.28■■□□□ 1.16
UBE2D1-201ENST00000373910 MAGI3Q5TCQ9 1506 aa22.27■■□□□ 1.16
UBE2D1-201ENST00000373910 DHX57Q6P158 1386 aaKnown RBP22.25■■□□□ 1.15
UBE2D1-201ENST00000373910 CDK13Q14004 1512 aaKnown RBP22.25■■□□□ 1.15
UBE2D1-201ENST00000373910 HECW1Q76N89 1606 aa22.24■■□□□ 1.15
UBE2D1-201ENST00000373910 EPRSP07814 1512 aaKnown RBP22.24■■□□□ 1.15
UBE2D1-201ENST00000373910 CENPBP07199 599 aaPredicted RBP22.23■■□□□ 1.15
UBE2D1-201ENST00000373910 NCOA2Q15596 1464 aa22.23■■□□□ 1.15
UBE2D1-201ENST00000373910 JPH4Q96JJ6 628 aa22.23■■□□□ 1.15
UBE2D1-201ENST00000373910 NUP160Q12769 1436 aa22.22■■□□□ 1.15
UBE2D1-201ENST00000373910 FGD6Q6ZV73 1430 aa22.21■■□□□ 1.15
UBE2D1-201ENST00000373910 CCDC18Q5T9S5 1454 aa22.21■■□□□ 1.15
UBE2D1-201ENST00000373910 RAB3GAP2Q9H2M9 1393 aa22.2■■□□□ 1.14
UBE2D1-201ENST00000373910 EHBP1L1Q8N3D4 1523 aa22.19■■□□□ 1.14
UBE2D1-201ENST00000373910 DIEXFQ68CQ4 756 aaKnown RBP22.18■■□□□ 1.14
UBE2D1-201ENST00000373910 SUPT6HQ7KZ85 1726 aaKnown RBP22.17■■□□□ 1.14
UBE2D1-201ENST00000373910 MYOM3Q5VTT5 1437 aa22.14■■□□□ 1.13
UBE2D1-201ENST00000373910 SETD5Q9C0A6 1442 aa22.13■■□□□ 1.13
UBE2D1-201ENST00000373910 NUP153P49790 1475 aaKnown RBP22.13■■□□□ 1.13
UBE2D1-201ENST00000373910 PLB1Q6P1J6 1458 aa22.12■■□□□ 1.13
UBE2D1-201ENST00000373910 RAPGEF6Q8TEU7 1601 aa22.11■■□□□ 1.13
UBE2D1-201ENST00000373910 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.1■■□□□ 1.13
UBE2D1-201ENST00000373910 ARHGEF11O15085 1522 aa22.1■■□□□ 1.13
UBE2D1-201ENST00000373910 CARMIL2Q6F5E8 1435 aa22.09■■□□□ 1.13
UBE2D1-201ENST00000373910 PTPRKQ15262 1439 aa22.09■■□□□ 1.13
UBE2D1-201ENST00000373910 CHD1O14646 1710 aa22.06■■□□□ 1.12
UBE2D1-201ENST00000373910 CLSPNQ9HAW4 1339 aa22.05■■□□□ 1.12
UBE2D1-201ENST00000373910 PTPN23Q9H3S7 1636 aa22.04■■□□□ 1.12
UBE2D1-201ENST00000373910 PRG4Q92954 1404 aaPredicted RBP22.01■■□□□ 1.11
UBE2D1-201ENST00000373910 CHIC2Q9UKJ5 165 aa21.99■■□□□ 1.11
UBE2D1-201ENST00000373910 MAPKBP1O60336 1514 aa21.97■■□□□ 1.11
UBE2D1-201ENST00000373910 CDK11AQ9UQ88 783 aaPredicted RBP21.97■■□□□ 1.11
UBE2D1-201ENST00000373910 ZNF316A6NFI3 1004 aaPredicted RBP21.96■■□□□ 1.11
UBE2D1-201ENST00000373910 ZNF644Q9H582 1327 aaPredicted RBP21.93■■□□□ 1.1
UBE2D1-201ENST00000373910 TCOF1Q13428 1488 aaKnown RBP21.93■■□□□ 1.1
UBE2D1-201ENST00000373910 RRP7BPQ9NSQ0 103 aa21.93■■□□□ 1.1
UBE2D1-201ENST00000373910 ABCA8O94911 1581 aa21.91■■□□□ 1.1
UBE2D1-201ENST00000373910 HFM1A2PYH4 1435 aa21.91■■□□□ 1.1
UBE2D1-201ENST00000373910 TROQ12816 1431 aaPredicted RBP21.91■■□□□ 1.1
UBE2D1-201ENST00000373910 MIA2Q96PC5 1412 aa21.91■■□□□ 1.1
UBE2D1-201ENST00000373910 SIN3AQ96ST3 1273 aa21.91■■□□□ 1.1
UBE2D1-201ENST00000373910 PTPRGP23470 1445 aa21.9■■□□□ 1.1
UBE2D1-201ENST00000373910 NAIPQ13075 1403 aa21.9■■□□□ 1.1
UBE2D1-201ENST00000373910 ATP10BO94823 1461 aa21.88■■□□□ 1.09
UBE2D1-201ENST00000373910 KIF14Q15058 1648 aa21.87■■□□□ 1.09
UBE2D1-201ENST00000373910 ERCC6L2Q5T890 1561 aa21.87■■□□□ 1.09
UBE2D1-201ENST00000373910 YTHDC1Q96MU7 727 aaKnown RBP21.85■■□□□ 1.09
UBE2D1-201ENST00000373910 PLEKHD1A6NEE1 506 aa21.84■■□□□ 1.09
UBE2D1-201ENST00000373910 ZNF777Q9ULD5 760 aaPredicted RBP21.82■■□□□ 1.08
UBE2D1-201ENST00000373910 SHROOM2Q13796 1616 aa21.82■■□□□ 1.08
UBE2D1-201ENST00000373910 CFDP1Q9UEE9 299 aaPredicted RBP21.82■■□□□ 1.08
UBE2D1-201ENST00000373910 GPATCH8Q9UKJ3 1502 aaKnown RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms