RNA–Protein interactions for RNA: ENST00000373891.2

CHPF-202, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 1,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-202ENST00000373891 RUSC2Q8N2Y8 1516 aa35.89■■■■□ 3.34
CHPF-202ENST00000373891 ADCY10Q96PN6 1610 aa35.65■■■■□ 3.3
CHPF-202ENST00000373891 CUL7Q14999 1698 aa35.63■■■■□ 3.29
CHPF-202ENST00000373891 IGF1RP08069 1367 aa35.63■■■■□ 3.29
CHPF-202ENST00000373891 NPM1P06748 294 aaKnown RBP eCLIP35.62■■■■□ 3.29
CHPF-202ENST00000373891 KIF27Q86VH2 1401 aa35.61■■■■□ 3.29
CHPF-202ENST00000373891 FAM69CQ0P6D2 419 aa35.61■■■■□ 3.29
CHPF-202ENST00000373891 KIAA0586Q9BVV6 1533 aa35.6■■■■□ 3.29
CHPF-202ENST00000373891 ABCC10Q5T3U5 1492 aa35.58■■■■□ 3.29
CHPF-202ENST00000373891 MAPKBP1O60336 1514 aa35.56■■■■□ 3.28
CHPF-202ENST00000373891 DIP2BQ9P265 1576 aa35.55■■■■□ 3.28
CHPF-202ENST00000373891 TSPOAP1O95153 1857 aa35.5■■■■□ 3.27
CHPF-202ENST00000373891 TTBK1Q5TCY1 1321 aaPredicted RBP35.47■■■■□ 3.27
CHPF-202ENST00000373891 CARMIL1Q5VZK9 1371 aa35.4■■■■□ 3.26
CHPF-202ENST00000373891 PTPRGP23470 1445 aa35.35■■■■□ 3.25
CHPF-202ENST00000373891 KDM6BO15054 1643 aa35.34■■■■□ 3.25
CHPF-202ENST00000373891 IQGAP2Q13576 1575 aa35.29■■■■□ 3.24
CHPF-202ENST00000373891 CARMIL2Q6F5E8 1435 aa35.26■■■■□ 3.24
CHPF-202ENST00000373891 TNIKQ9UKE5 1360 aa35.25■■■■□ 3.23
CHPF-202ENST00000373891 ABCC2Q92887 1545 aa35.2■■■■□ 3.23
CHPF-202ENST00000373891 ASXL2Q76L83 1435 aa35.14■■■■□ 3.22
CHPF-202ENST00000373891 DISP1Q96F81 1524 aa35.12■■■■□ 3.21
CHPF-202ENST00000373891 PPRC1Q5VV67 1664 aaKnown RBP35.1■■■■□ 3.21
CHPF-202ENST00000373891 UACAQ9BZF9 1416 aa35.06■■■■□ 3.2
CHPF-202ENST00000373891 PLB1Q6P1J6 1458 aa35.06■■■■□ 3.2
CHPF-202ENST00000373891 RAPGEF2Q9Y4G8 1499 aa35.06■■■■□ 3.2
CHPF-202ENST00000373891 KDM4FA0A1W2PPD8 638 aa35.06■■■■□ 3.2
CHPF-202ENST00000373891 UHRF1BP1LA0JNW5 1464 aa35.05■■■■□ 3.2
CHPF-202ENST00000373891 GLI2P10070 1586 aa35.02■■■■□ 3.2
CHPF-202ENST00000373891 UGGT2Q9NYU1 1516 aa35■■■■□ 3.19
CHPF-202ENST00000373891 KIAA0556O60303 1618 aa34.99■■■■□ 3.19
CHPF-202ENST00000373891 ZCCHC11Q5TAX3 1644 aaKnown RBP34.97■■■■□ 3.19
CHPF-202ENST00000373891 KDM5BQ9UGL1 1544 aa34.93■■■■□ 3.18
CHPF-202ENST00000373891 CTTNBP2Q8WZ74 1663 aa34.92■■■■□ 3.18
CHPF-202ENST00000373891 EPRSP07814 1512 aaKnown RBP34.91■■■■□ 3.18
CHPF-202ENST00000373891 MAP3K4Q9Y6R4 1608 aa34.89■■■■□ 3.18
CHPF-202ENST00000373891 COL17A1Q9UMD9 1497 aaPredicted RBP34.83■■■■□ 3.17
CHPF-202ENST00000373891 ADGRL1O94910 1474 aa34.75■■■■□ 3.15
CHPF-202ENST00000373891 TEX14Q8IWB6 1497 aa34.75■■■■□ 3.15
CHPF-202ENST00000373891 WDR7Q9Y4E6 1490 aa34.73■■■■□ 3.15
CHPF-202ENST00000373891 GOLGA3Q08378 1498 aa34.67■■■■□ 3.14
CHPF-202ENST00000373891 ABCA8O94911 1581 aa34.66■■■■□ 3.14
CHPF-202ENST00000373891 KCNH8Q96L42 1107 aa34.62■■■■□ 3.13
CHPF-202ENST00000373891 PRXQ9BXM0 1461 aa34.6■■■■□ 3.13
CHPF-202ENST00000373891 CFAP43Q8NDM7 1665 aa34.59■■■■□ 3.13
CHPF-202ENST00000373891 CD109Q6YHK3 1445 aa34.55■■■■□ 3.12
CHPF-202ENST00000373891 ARID3CA6NKF2 412 aa34.53■■■■□ 3.12
CHPF-202ENST00000373891 P3H3Q8IVL6 736 aa34.51■■■■□ 3.12
CHPF-202ENST00000373891 MAGI3Q5TCQ9 1506 aa34.49■■■■□ 3.11
CHPF-202ENST00000373891 HECW2Q9P2P5 1572 aa34.39■■■■□ 3.1
CHPF-202ENST00000373891 KIF21BO75037 1637 aa34.37■■■■□ 3.09
CHPF-202ENST00000373891 ATP10BO94823 1461 aa34.35■■■■□ 3.09
CHPF-202ENST00000373891 ILDR1Q86SU0 546 aaPredicted RBP34.31■■■■□ 3.08
CHPF-202ENST00000373891 FAM9AQ8IZU1 332 aaPredicted RBP34.31■■■■□ 3.08
CHPF-202ENST00000373891 SAMD9Q5K651 1589 aa34.31■■■■□ 3.08
CHPF-202ENST00000373891 CSRNP3Q8WYN3 585 aa34.28■■■■□ 3.08
CHPF-202ENST00000373891 RAPGEF6Q8TEU7 1601 aa34.27■■■■□ 3.08
CHPF-202ENST00000373891 RANGAP1P46060 587 aaPredicted RBP34.26■■■■□ 3.08
CHPF-202ENST00000373891 ABCA9Q8IUA7 1624 aa34.26■■■■□ 3.07
CHPF-202ENST00000373891 ARAP3Q8WWN8 1544 aa34.23■■■■□ 3.07
CHPF-202ENST00000373891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.21■■■■□ 3.07
CHPF-202ENST00000373891 HNRNPUL2Q1KMD3 747 aaKnown RBP34.21■■■■□ 3.07
CHPF-202ENST00000373891 FHOD3Q2V2M9 1422 aa34.12■■■■□ 3.05
CHPF-202ENST00000373891 RAPGEF3O95398 923 aa34.11■■■■□ 3.05
CHPF-202ENST00000373891 NUP153P49790 1475 aaKnown RBP34.1■■■■□ 3.05
CHPF-202ENST00000373891 FRMPD1Q5SYB0 1578 aa34.04■■■■□ 3.04
CHPF-202ENST00000373891 NEO1Q92859 1461 aa34.04■■■■□ 3.04
CHPF-202ENST00000373891 PHLDB1Q86UU1 1377 aa34.04■■■■□ 3.04
CHPF-202ENST00000373891 ADAMTSL3P82987 1691 aa34.02■■■■□ 3.04
CHPF-202ENST00000373891 EEA1Q15075 1411 aa34.01■■■■□ 3.03
CHPF-202ENST00000373891 PTPRMP28827 1452 aa33.95■■■■□ 3.03
CHPF-202ENST00000373891 BCORL1Q5H9F3 1711 aa33.94■■■■□ 3.02
CHPF-202ENST00000373891 ARID4BQ4LE39 1312 aaPredicted RBP33.93■■■■□ 3.02
CHPF-202ENST00000373891 MADDQ8WXG6 1647 aa33.91■■■■□ 3.02
CHPF-202ENST00000373891 PLEKHD1A6NEE1 506 aa33.91■■■■□ 3.02
CHPF-202ENST00000373891 RICTORQ6R327 1708 aa33.9■■■■□ 3.02
CHPF-202ENST00000373891 TTC37Q6PGP7 1564 aa33.87■■■■□ 3.01
CHPF-202ENST00000373891 EHMT2Q96KQ7 1210 aa33.87■■■■□ 3.01
CHPF-202ENST00000373891 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.87■■■■□ 3.01
CHPF-202ENST00000373891 EFCAB5A4FU69 1503 aa33.86■■■■□ 3.01
CHPF-202ENST00000373891 ARHGEF40Q8TER5 1519 aa33.85■■■■□ 3.01
CHPF-202ENST00000373891 DENND4BO75064 1496 aaPredicted RBP33.84■■■■□ 3.01
CHPF-202ENST00000373891 AKNAQ7Z591 1439 aa33.84■■■■□ 3.01
CHPF-202ENST00000373891 FANCAO15360 1455 aa33.83■■■■□ 3.01
CHPF-202ENST00000373891 CFAP74Q9C0B2 1584 aa33.83■■■■□ 3.01
CHPF-202ENST00000373891 CDK13Q14004 1512 aaKnown RBP33.83■■■■□ 3.01
CHPF-202ENST00000373891 RIMS1Q86UR5 1692 aaKnown RBP33.82■■■■□ 3
CHPF-202ENST00000373891 SIGLEC1Q9BZZ2 1709 aa33.73■■■□□ 2.99
CHPF-202ENST00000373891 PLPPR3Q6T4P5 718 aa33.72■■■□□ 2.99
CHPF-202ENST00000373891 PCF11O94913 1555 aaKnown RBP33.71■■■□□ 2.99
CHPF-202ENST00000373891 ATP1B4Q9UN42 357 aaPredicted RBP33.7■■■□□ 2.99
CHPF-202ENST00000373891 YEATS2Q9ULM3 1422 aa33.69■■■□□ 2.98
CHPF-202ENST00000373891 ZMYM4Q5VZL5 1548 aa33.69■■■□□ 2.98
CHPF-202ENST00000373891 ZFYVE16Q7Z3T8 1539 aa33.69■■■□□ 2.98
CHPF-202ENST00000373891 UBTFP17480 764 aaKnown RBP33.67■■■□□ 2.98
CHPF-202ENST00000373891 LMTK3Q96Q04 1460 aa33.66■■■□□ 2.98
CHPF-202ENST00000373891 HECW1Q76N89 1606 aa33.65■■■□□ 2.98
CHPF-202ENST00000373891 MYO5CQ9NQX4 1742 aa33.61■■■□□ 2.97
CHPF-202ENST00000373891 MLECQ14165 292 aa33.6■■■□□ 2.97
CHPF-202ENST00000373891 SCAPERQ9BY12 1400 aa33.6■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms