RNA–Protein interactions for RNA: ENST00000373190.5

PTPRT-204, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-204ENST00000373190 EIF4G2P78344 907 aaKnown RBP eCLIP11.53□□□□□ -0.56
PTPRT-204ENST00000373190 LAS1LQ9Y4W2 734 aaKnown RBP11.53□□□□□ -0.56
PTPRT-204ENST00000373190 MYO15BQ96JP2 1530 aa11.52□□□□□ -0.56
PTPRT-204ENST00000373190 PABPN1Q86U42 306 aaKnown RBP eCLIP11.52□□□□□ -0.57
PTPRT-204ENST00000373190 ABCC9O60706 1549 aa11.52□□□□□ -0.57
PTPRT-204ENST00000373190 PPP4R2Q9NY27 417 aa11.51□□□□□ -0.57
PTPRT-204ENST00000373190 HIRIP3Q9BW71 556 aaPredicted RBP11.5□□□□□ -0.57
PTPRT-204ENST00000373190 DEKP35659 375 aaKnown RBP11.5□□□□□ -0.57
PTPRT-204ENST00000373190 CLIP1P30622 1438 aa11.48□□□□□ -0.57
PTPRT-204ENST00000373190 CASC1Q6TDU7 716 aa11.48□□□□□ -0.57
PTPRT-204ENST00000373190 ZRSR1Q15695 479 aaKnown RBP11.47□□□□□ -0.57
PTPRT-204ENST00000373190 L1TD1Q5T7N2 865 aaKnown RBP11.46□□□□□ -0.58
PTPRT-204ENST00000373190 CHIC2Q9UKJ5 165 aa11.45□□□□□ -0.58
PTPRT-204ENST00000373190 CHAF1AQ13111 956 aaPredicted RBP11.44□□□□□ -0.58
PTPRT-204ENST00000373190 MTUS2Q5JR59 1369 aa11.44□□□□□ -0.58
PTPRT-204ENST00000373190 ZCCHC6Q5VYS8 1495 aaKnown RBP11.43□□□□□ -0.58
PTPRT-204ENST00000373190 CHGAP10645 457 aaKnown RBP11.43□□□□□ -0.58
PTPRT-204ENST00000373190 MSNP26038 577 aaKnown RBP11.43□□□□□ -0.58
PTPRT-204ENST00000373190 STAG3Q9UJ98 1225 aa11.42□□□□□ -0.58
PTPRT-204ENST00000373190 KDM2AQ9Y2K7 1162 aa11.42□□□□□ -0.58
PTPRT-204ENST00000373190 GOLGA3Q08378 1498 aa11.42□□□□□ -0.58
PTPRT-204ENST00000373190 CEP162Q5TB80 1403 aa11.42□□□□□ -0.58
PTPRT-204ENST00000373190 FTSJ3Q8IY81 847 aaKnown RBP11.42□□□□□ -0.58
PTPRT-204ENST00000373190 RBM19Q9Y4C8 960 aaKnown RBP11.41□□□□□ -0.58
PTPRT-204ENST00000373190 GOLGA6L6A8MZA4 724 aa11.41□□□□□ -0.58
PTPRT-204ENST00000373190 EEA1Q15075 1411 aa11.39□□□□□ -0.59
PTPRT-204ENST00000373190 B4GALNT3Q6L9W6 998 aa11.38□□□□□ -0.59
PTPRT-204ENST00000373190 ESF1Q9H501 851 aaKnown RBP11.38□□□□□ -0.59
PTPRT-204ENST00000373190 NRDCO43847 1150 aa11.38□□□□□ -0.59
PTPRT-204ENST00000373190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.38□□□□□ -0.59
PTPRT-204ENST00000373190 RGS3P49796 1198 aa11.37□□□□□ -0.59
PTPRT-204ENST00000373190 HSP90AB1P08238 724 aaKnown RBP11.37□□□□□ -0.59
PTPRT-204ENST00000373190 TSPY4P0CV99 314 aa11.35□□□□□ -0.59
PTPRT-204ENST00000373190 TSPY10P0CW01 314 aa11.35□□□□□ -0.59
PTPRT-204ENST00000373190 HSCBQ8IWL3 235 aa11.35□□□□□ -0.59
PTPRT-204ENST00000373190 PLCB2Q00722 1185 aa11.35□□□□□ -0.59
PTPRT-204ENST00000373190 TPRNQ4KMQ1 711 aa11.34□□□□□ -0.59
PTPRT-204ENST00000373190 CDCA8Q53HL2 280 aa11.34□□□□□ -0.59
PTPRT-204ENST00000373190 KNSTRNQ9Y448 316 aa11.34□□□□□ -0.59
PTPRT-204ENST00000373190 RSF1Q96T23 1441 aaPredicted RBP11.34□□□□□ -0.59
PTPRT-204ENST00000373190 CFAP53Q96M91 514 aa11.32□□□□□ -0.6
PTPRT-204ENST00000373190 CHMP4BQ9H444 224 aaKnown RBP11.32□□□□□ -0.6
PTPRT-204ENST00000373190 RRP7BPQ9NSQ0 103 aa11.31□□□□□ -0.6
PTPRT-204ENST00000373190 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.3□□□□□ -0.6
PTPRT-204ENST00000373190 MS4A1P11836 297 aa11.29□□□□□ -0.6
PTPRT-204ENST00000373190 CCER2I3L3R5 266 aa11.29□□□□□ -0.6
PTPRT-204ENST00000373190 SENP3-EIF4A1A0A087X0R7 540 aa11.29□□□□□ -0.6
PTPRT-204ENST00000373190 ARID4BQ4LE39 1312 aaPredicted RBP11.28□□□□□ -0.6
PTPRT-204ENST00000373190 PNNQ9H307 717 aaKnown RBP11.28□□□□□ -0.6
PTPRT-204ENST00000373190 PTMSP20962 102 aa11.28□□□□□ -0.6
PTPRT-204ENST00000373190 CEP164Q9UPV0 1460 aa11.27□□□□□ -0.61
PTPRT-204ENST00000373190 FRAT1Q92837 279 aaPredicted RBP11.26□□□□□ -0.61
PTPRT-204ENST00000373190 AMER1Q5JTC6 1135 aaPredicted RBP11.26□□□□□ -0.61
PTPRT-204ENST00000373190 CARD11Q9BXL7 1154 aa11.25□□□□□ -0.61
PTPRT-204ENST00000373190 GBP4Q96PP9 640 aa11.25□□□□□ -0.61
PTPRT-204ENST00000373190 TNIKQ9UKE5 1360 aa11.25□□□□□ -0.61
PTPRT-204ENST00000373190 MAPK8IP3Q9UPT6 1336 aa11.24□□□□□ -0.61
PTPRT-204ENST00000373190 GOLGA6L4A6NEF3 574 aa11.24□□□□□ -0.61
PTPRT-204ENST00000373190 KIAA2012Q0VF49 1180 aa11.23□□□□□ -0.61
PTPRT-204ENST00000373190 CFAP44Q96MT7 982 aa11.23□□□□□ -0.61
PTPRT-204ENST00000373190 DRC7Q8IY82 874 aa11.23□□□□□ -0.61
PTPRT-204ENST00000373190 TSHZ2Q9NRE2 1034 aa11.22□□□□□ -0.61
PTPRT-204ENST00000373190 SPRYD3Q8NCJ5 442 aa11.22□□□□□ -0.61
PTPRT-204ENST00000373190 IPO9Q96P70 1041 aaKnown RBP11.22□□□□□ -0.61
PTPRT-204ENST00000373190 MCCP23508 829 aa11.21□□□□□ -0.61
PTPRT-204ENST00000373190 RSPH6AQ9H0K4 717 aa11.21□□□□□ -0.62
PTPRT-204ENST00000373190 NEUROD2Q15784 382 aa11.2□□□□□ -0.62
PTPRT-204ENST00000373190 TCERG1O14776 1098 aaKnown RBP11.2□□□□□ -0.62
PTPRT-204ENST00000373190 FGD1P98174 961 aa11.2□□□□□ -0.62
PTPRT-204ENST00000373190 HSP90AA2PQ14568 343 aaPredicted RBP11.2□□□□□ -0.62
PTPRT-204ENST00000373190 NUDCQ9Y266 331 aa11.2□□□□□ -0.62
PTPRT-204ENST00000373190 GOLGA6L3A6NEY3 463 aa11.19□□□□□ -0.62
PTPRT-204ENST00000373190 TNNT3P45378 269 aaPredicted RBP11.19□□□□□ -0.62
PTPRT-204ENST00000373190 USP35Q9P2H5 1018 aa11.19□□□□□ -0.62
PTPRT-204ENST00000373190 TIMELESSQ9UNS1 1208 aa11.19□□□□□ -0.62
PTPRT-204ENST00000373190 CCNB3Q8WWL7 1395 aa11.19□□□□□ -0.62
PTPRT-204ENST00000373190 ARID3AQ99856 593 aa11.18□□□□□ -0.62
PTPRT-204ENST00000373190 KCNJ4P48050 445 aa11.18□□□□□ -0.62
PTPRT-204ENST00000373190 RGL3Q3MIN7 710 aa11.18□□□□□ -0.62
PTPRT-204ENST00000373190 SIN3AQ96ST3 1273 aa11.18□□□□□ -0.62
PTPRT-204ENST00000373190 RB1CC1Q8TDY2 1594 aa11.17□□□□□ -0.62
PTPRT-204ENST00000373190 GZF1Q9H116 711 aaPredicted RBP11.17□□□□□ -0.62
PTPRT-204ENST00000373190 SYAP1Q96A49 352 aaPredicted RBP11.17□□□□□ -0.62
PTPRT-204ENST00000373190 SLKQ9H2G2 1235 aaPredicted RBP11.17□□□□□ -0.62
PTPRT-204ENST00000373190 CC2D1BQ5T0F9 858 aaKnown RBP11.17□□□□□ -0.62
PTPRT-204ENST00000373190 OS9Q13438 667 aaPredicted RBP11.15□□□□□ -0.63
PTPRT-204ENST00000373190 WRNQ14191 1432 aaPredicted RBP eCLIP11.14□□□□□ -0.63
PTPRT-204ENST00000373190 NPM1P06748 294 aaKnown RBP eCLIP11.14□□□□□ -0.63
PTPRT-204ENST00000373190 RCAN3Q9UKA8 241 aa11.13□□□□□ -0.63
PTPRT-204ENST00000373190 KIF27Q86VH2 1401 aa11.13□□□□□ -0.63
PTPRT-204ENST00000373190 FHAD1B1AJZ9 1412 aa11.13□□□□□ -0.63
PTPRT-204ENST00000373190 NAP1L2Q9ULW6 460 aaPredicted RBP11.12□□□□□ -0.63
PTPRT-204ENST00000373190 C14orf37Q86TY3 774 aa11.12□□□□□ -0.63
PTPRT-204ENST00000373190 PLPPR3Q6T4P5 718 aa11.11□□□□□ -0.63
PTPRT-204ENST00000373190 TMF1P82094 1093 aa11.11□□□□□ -0.63
PTPRT-204ENST00000373190 KTN1Q86UP2 1357 aaKnown RBP11.11□□□□□ -0.63
PTPRT-204ENST00000373190 PPP1R15AO75807 674 aaPredicted RBP11.11□□□□□ -0.63
PTPRT-204ENST00000373190 SETD5Q9C0A6 1442 aa11.1□□□□□ -0.63
PTPRT-204ENST00000373190 ZBTB7CA1YPR0 619 aa11.1□□□□□ -0.63
PTPRT-204ENST00000373190 TAOK2Q9UL54 1235 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms