RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 ARHGAP35Q9NRY4 1499 aa20.41■□□□□ 0.86
CSTF2-201ENST00000372972 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.41■□□□□ 0.86
CSTF2-201ENST00000372972 GRIN2BQ13224 1484 aa20.4■□□□□ 0.86
CSTF2-201ENST00000372972 CCER1Q8TC90 406 aaPredicted RBP20.39■□□□□ 0.85
CSTF2-201ENST00000372972 FHAD1B1AJZ9 1412 aa20.36■□□□□ 0.85
CSTF2-201ENST00000372972 CTTNBP2Q8WZ74 1663 aa20.35■□□□□ 0.85
CSTF2-201ENST00000372972 EIF4G3O43432 1585 aaKnown RBP20.35■□□□□ 0.85
CSTF2-201ENST00000372972 ADAMTS12P58397 1594 aa20.35■□□□□ 0.85
CSTF2-201ENST00000372972 SNAPC4Q5SXM2 1469 aa20.27■□□□□ 0.84
CSTF2-201ENST00000372972 KANK4Q5T7N3 995 aaPredicted RBP20.26■□□□□ 0.83
CSTF2-201ENST00000372972 HNRNPUL2Q1KMD3 747 aaKnown RBP20.23■□□□□ 0.83
CSTF2-201ENST00000372972 EFCAB5A4FU69 1503 aa20.23■□□□□ 0.83
CSTF2-201ENST00000372972 P3H3Q8IVL6 736 aa20.23■□□□□ 0.83
CSTF2-201ENST00000372972 MAGI1Q96QZ7 1491 aaPredicted RBP20.2■□□□□ 0.82
CSTF2-201ENST00000372972 FHOD3Q2V2M9 1422 aa20.18■□□□□ 0.82
CSTF2-201ENST00000372972 MAP3K1Q13233 1512 aa20.18■□□□□ 0.82
CSTF2-201ENST00000372972 GRIN2AQ12879 1464 aa20.16■□□□□ 0.82
CSTF2-201ENST00000372972 SAMD9Q5K651 1589 aa20.15■□□□□ 0.82
CSTF2-201ENST00000372972 IQGAP2Q13576 1575 aa20.14■□□□□ 0.81
CSTF2-201ENST00000372972 SYNJ2O15056 1496 aa20.13■□□□□ 0.81
CSTF2-201ENST00000372972 CHMP7Q8WUX9 453 aaPredicted RBP20.12■□□□□ 0.81
CSTF2-201ENST00000372972 RRBP1Q9P2E9 1410 aaKnown RBP20.11■□□□□ 0.81
CSTF2-201ENST00000372972 TIAM1Q13009 1591 aa20.11■□□□□ 0.81
CSTF2-201ENST00000372972 PCF11O94913 1555 aaKnown RBP20.09■□□□□ 0.81
CSTF2-201ENST00000372972 KIAA0586Q9BVV6 1533 aa20.08■□□□□ 0.81
CSTF2-201ENST00000372972 FBLN2P98095 1184 aa20.08■□□□□ 0.8
CSTF2-201ENST00000372972 FMN1Q68DA7 1419 aa20.05■□□□□ 0.8
CSTF2-201ENST00000372972 LRRC9Q6ZRR7 1453 aa20.05■□□□□ 0.8
CSTF2-201ENST00000372972 CASKIN1Q8WXD9 1431 aa20.04■□□□□ 0.8
CSTF2-201ENST00000372972 CEP170Q5SW79 1584 aa20.04■□□□□ 0.8
CSTF2-201ENST00000372972 UGGT2Q9NYU1 1516 aa20.04■□□□□ 0.8
CSTF2-201ENST00000372972 CCNB3Q8WWL7 1395 aa20.04■□□□□ 0.8
CSTF2-201ENST00000372972 FYCO1Q9BQS8 1478 aa20.03■□□□□ 0.8
CSTF2-201ENST00000372972 ATP1B4Q9UN42 357 aaPredicted RBP20.02■□□□□ 0.8
CSTF2-201ENST00000372972 NUP160Q12769 1436 aa20■□□□□ 0.79
CSTF2-201ENST00000372972 CFAP43Q8NDM7 1665 aa19.99■□□□□ 0.79
CSTF2-201ENST00000372972 DISP1Q96F81 1524 aa19.95■□□□□ 0.78
CSTF2-201ENST00000372972 KIAA0556O60303 1618 aa19.94■□□□□ 0.78
CSTF2-201ENST00000372972 PHLDB1Q86UU1 1377 aa19.92■□□□□ 0.78
CSTF2-201ENST00000372972 CHD1O14646 1710 aa19.91■□□□□ 0.78
CSTF2-201ENST00000372972 LRRIQ1Q96JM4 1722 aa19.9■□□□□ 0.78
CSTF2-201ENST00000372972 CLSPNQ9HAW4 1339 aa19.88■□□□□ 0.77
CSTF2-201ENST00000372972 JPH4Q96JJ6 628 aa19.88■□□□□ 0.77
CSTF2-201ENST00000372972 ITGAEP38570 1179 aa19.86■□□□□ 0.77
CSTF2-201ENST00000372972 DHX57Q6P158 1386 aaKnown RBP19.86■□□□□ 0.77
CSTF2-201ENST00000372972 HECW1Q76N89 1606 aa19.84■□□□□ 0.77
CSTF2-201ENST00000372972 CARMIL2Q6F5E8 1435 aa19.82■□□□□ 0.76
CSTF2-201ENST00000372972 MTUS2Q5JR59 1369 aa19.81■□□□□ 0.76
CSTF2-201ENST00000372972 FAM50AQ14320 339 aaKnown RBP19.81■□□□□ 0.76
CSTF2-201ENST00000372972 CCDC18Q5T9S5 1454 aa19.8■□□□□ 0.76
CSTF2-201ENST00000372972 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.79■□□□□ 0.76
CSTF2-201ENST00000372972 EPRSP07814 1512 aaKnown RBP19.78■□□□□ 0.76
CSTF2-201ENST00000372972 RAPGEF6Q8TEU7 1601 aa19.76■□□□□ 0.75
CSTF2-201ENST00000372972 CDK13Q14004 1512 aaKnown RBP19.75■□□□□ 0.75
CSTF2-201ENST00000372972 ZNF316A6NFI3 1004 aaPredicted RBP19.75■□□□□ 0.75
CSTF2-201ENST00000372972 PRG4Q92954 1404 aaPredicted RBP19.74■□□□□ 0.75
CSTF2-201ENST00000372972 SETD5Q9C0A6 1442 aa19.74■□□□□ 0.75
CSTF2-201ENST00000372972 RAB3GAP2Q9H2M9 1393 aa19.74■□□□□ 0.75
CSTF2-201ENST00000372972 MAGI3Q5TCQ9 1506 aa19.73■□□□□ 0.75
CSTF2-201ENST00000372972 ARID3CA6NKF2 412 aa19.73■□□□□ 0.75
CSTF2-201ENST00000372972 EHBP1L1Q8N3D4 1523 aa19.73■□□□□ 0.75
CSTF2-201ENST00000372972 NUP153P49790 1475 aaKnown RBP19.73■□□□□ 0.75
CSTF2-201ENST00000372972 FGD6Q6ZV73 1430 aa19.72■□□□□ 0.75
CSTF2-201ENST00000372972 PLB1Q6P1J6 1458 aa19.71■□□□□ 0.75
CSTF2-201ENST00000372972 DIEXFQ68CQ4 756 aaKnown RBP19.71■□□□□ 0.75
CSTF2-201ENST00000372972 SHROOM2Q13796 1616 aa19.7■□□□□ 0.74
CSTF2-201ENST00000372972 NCOA2Q15596 1464 aa19.7■□□□□ 0.74
CSTF2-201ENST00000372972 SUPT6HQ7KZ85 1726 aaKnown RBP19.69■□□□□ 0.74
CSTF2-201ENST00000372972 MYOM3Q5VTT5 1437 aa19.66■□□□□ 0.74
CSTF2-201ENST00000372972 CLASP1Q7Z460 1538 aa19.66■□□□□ 0.74
CSTF2-201ENST00000372972 ABCA8O94911 1581 aa19.64■□□□□ 0.74
CSTF2-201ENST00000372972 ARHGEF11O15085 1522 aa19.64■□□□□ 0.73
CSTF2-201ENST00000372972 PTPRGP23470 1445 aa19.63■□□□□ 0.73
CSTF2-201ENST00000372972 ERCC6L2Q5T890 1561 aa19.61■□□□□ 0.73
CSTF2-201ENST00000372972 CDK11AQ9UQ88 783 aaPredicted RBP19.59■□□□□ 0.73
CSTF2-201ENST00000372972 MAPKBP1O60336 1514 aa19.56■□□□□ 0.72
CSTF2-201ENST00000372972 PTPN23Q9H3S7 1636 aa19.54■□□□□ 0.72
CSTF2-201ENST00000372972 PTPRKQ15262 1439 aa19.54■□□□□ 0.72
CSTF2-201ENST00000372972 ATP10BO94823 1461 aa19.54■□□□□ 0.72
CSTF2-201ENST00000372972 TROQ12816 1431 aaPredicted RBP19.53■□□□□ 0.72
CSTF2-201ENST00000372972 HFM1A2PYH4 1435 aa19.52■□□□□ 0.72
CSTF2-201ENST00000372972 TCOF1Q13428 1488 aaKnown RBP19.52■□□□□ 0.72
CSTF2-201ENST00000372972 MIA2Q96PC5 1412 aa19.51■□□□□ 0.71
CSTF2-201ENST00000372972 UACAQ9BZF9 1416 aa19.51■□□□□ 0.71
CSTF2-201ENST00000372972 PLEKHD1A6NEE1 506 aa19.47■□□□□ 0.71
CSTF2-201ENST00000372972 ADCY10Q96PN6 1610 aa19.47■□□□□ 0.71
CSTF2-201ENST00000372972 NAIPQ13075 1403 aa19.46■□□□□ 0.71
CSTF2-201ENST00000372972 KIF14Q15058 1648 aa19.46■□□□□ 0.71
CSTF2-201ENST00000372972 ABCC2Q92887 1545 aa19.44■□□□□ 0.7
CSTF2-201ENST00000372972 OSCARQ8IYS5 282 aa19.44■□□□□ 0.7
CSTF2-201ENST00000372972 TIMELESSQ9UNS1 1208 aa19.43■□□□□ 0.7
CSTF2-201ENST00000372972 SIN3AQ96ST3 1273 aa19.41■□□□□ 0.7
CSTF2-201ENST00000372972 NEUROD1Q13562 356 aa19.39■□□□□ 0.7
CSTF2-201ENST00000372972 AKNAQ7Z591 1439 aa19.38■□□□□ 0.69
CSTF2-201ENST00000372972 GPATCH8Q9UKJ3 1502 aaKnown RBP19.38■□□□□ 0.69
CSTF2-201ENST00000372972 CHIC2Q9UKJ5 165 aa19.38■□□□□ 0.69
CSTF2-201ENST00000372972 ITSN2Q9NZM3 1697 aa19.38■□□□□ 0.69
CSTF2-201ENST00000372972 UHRF1BP1LA0JNW5 1464 aa19.38■□□□□ 0.69
CSTF2-201ENST00000372972 RRP7BPQ9NSQ0 103 aa19.37■□□□□ 0.69
CSTF2-201ENST00000372972 ABCC10Q5T3U5 1492 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms