RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 MAGI1Q96QZ7 1491 aaPredicted RBP28.27■■■□□ 2.12
CD40-202ENST00000372285 TRIM26Q12899 539 aaPredicted RBP28.23■■■□□ 2.11
CD40-202ENST00000372285 EFCAB5A4FU69 1503 aa28.22■■■□□ 2.11
CD40-202ENST00000372285 PCGF6Q9BYE7 350 aa28.17■■■□□ 2.1
CD40-202ENST00000372285 SYNJ2O15056 1496 aa28.15■■■□□ 2.1
CD40-202ENST00000372285 GRIN2AQ12879 1464 aa28.15■■■□□ 2.1
CD40-202ENST00000372285 SAMD9Q5K651 1589 aa28.12■■■□□ 2.09
CD40-202ENST00000372285 IQGAP2Q13576 1575 aa28.11■■■□□ 2.09
CD40-202ENST00000372285 PPARGC1BQ86YN6 1023 aaKnown RBP28.11■■■□□ 2.09
CD40-202ENST00000372285 KIAA0586Q9BVV6 1533 aa28.04■■■□□ 2.08
CD40-202ENST00000372285 CHMP7Q8WUX9 453 aaPredicted RBP28.02■■■□□ 2.08
CD40-202ENST00000372285 FHOD3Q2V2M9 1422 aa28.01■■■□□ 2.08
CD40-202ENST00000372285 APLP2Q06481 763 aa28.01■■■□□ 2.07
CD40-202ENST00000372285 UGGT2Q9NYU1 1516 aa27.99■■■□□ 2.07
CD40-202ENST00000372285 CEP170Q5SW79 1584 aa27.98■■■□□ 2.07
CD40-202ENST00000372285 P3H3Q8IVL6 736 aa27.98■■■□□ 2.07
CD40-202ENST00000372285 NUP160Q12769 1436 aa27.95■■■□□ 2.07
CD40-202ENST00000372285 PCF11O94913 1555 aaKnown RBP27.93■■■□□ 2.06
CD40-202ENST00000372285 FMN1Q68DA7 1419 aa27.93■■■□□ 2.06
CD40-202ENST00000372285 MAP3K1Q13233 1512 aa27.92■■■□□ 2.06
CD40-202ENST00000372285 FBLN2P98095 1184 aa27.9■■■□□ 2.06
CD40-202ENST00000372285 FYCO1Q9BQS8 1478 aa27.89■■■□□ 2.06
CD40-202ENST00000372285 CHD1O14646 1710 aa27.88■■■□□ 2.05
CD40-202ENST00000372285 CASKIN1Q8WXD9 1431 aa27.88■■■□□ 2.05
CD40-202ENST00000372285 TTBK1Q5TCY1 1321 aaPredicted RBP27.86■■■□□ 2.05
CD40-202ENST00000372285 TIAM1Q13009 1591 aa27.85■■■□□ 2.05
CD40-202ENST00000372285 CFAP43Q8NDM7 1665 aa27.83■■■□□ 2.05
CD40-202ENST00000372285 KIAA0556O60303 1618 aa27.83■■■□□ 2.04
CD40-202ENST00000372285 DISP1Q96F81 1524 aa27.81■■■□□ 2.04
CD40-202ENST00000372285 KANK4Q5T7N3 995 aaPredicted RBP27.78■■■□□ 2.04
CD40-202ENST00000372285 LRRIQ1Q96JM4 1722 aa27.71■■■□□ 2.03
CD40-202ENST00000372285 LRRC9Q6ZRR7 1453 aa27.7■■■□□ 2.03
CD40-202ENST00000372285 JPH4Q96JJ6 628 aa27.7■■■□□ 2.02
CD40-202ENST00000372285 ATP1B4Q9UN42 357 aaPredicted RBP27.67■■■□□ 2.02
CD40-202ENST00000372285 CARMIL2Q6F5E8 1435 aa27.66■■■□□ 2.02
CD40-202ENST00000372285 HECW1Q76N89 1606 aa27.66■■■□□ 2.02
CD40-202ENST00000372285 SHROOM2Q13796 1616 aa27.62■■■□□ 2.01
CD40-202ENST00000372285 CCDC18Q5T9S5 1454 aa27.6■■■□□ 2.01
CD40-202ENST00000372285 RAPGEF6Q8TEU7 1601 aa27.56■■■□□ 2
CD40-202ENST00000372285 CLASP1Q7Z460 1538 aa27.55■■■□□ 2
CD40-202ENST00000372285 PRG4Q92954 1404 aaPredicted RBP27.53■■■□□ 2
CD40-202ENST00000372285 RRBP1Q9P2E9 1410 aaKnown RBP27.53■■■□□ 2
CD40-202ENST00000372285 EPRSP07814 1512 aaKnown RBP27.53■■■□□ 2
CD40-202ENST00000372285 EHBP1L1Q8N3D4 1523 aa27.47■■□□□ 1.99
CD40-202ENST00000372285 NUP153P49790 1475 aaKnown RBP27.47■■□□□ 1.99
CD40-202ENST00000372285 MTUS2Q5JR59 1369 aa27.46■■□□□ 1.99
CD40-202ENST00000372285 CDK13Q14004 1512 aaKnown RBP27.44■■□□□ 1.98
CD40-202ENST00000372285 ABCA8O94911 1581 aa27.43■■□□□ 1.98
CD40-202ENST00000372285 MAGI3Q5TCQ9 1506 aa27.43■■□□□ 1.98
CD40-202ENST00000372285 PLB1Q6P1J6 1458 aa27.42■■□□□ 1.98
CD40-202ENST00000372285 PHLDB1Q86UU1 1377 aa27.42■■□□□ 1.98
CD40-202ENST00000372285 SUPT6HQ7KZ85 1726 aaKnown RBP27.42■■□□□ 1.98
CD40-202ENST00000372285 HRCP23327 699 aa27.41■■□□□ 1.98
CD40-202ENST00000372285 CCNB3Q8WWL7 1395 aa27.41■■□□□ 1.98
CD40-202ENST00000372285 PTPRGP23470 1445 aa27.37■■□□□ 1.97
CD40-202ENST00000372285 ERCC6L2Q5T890 1561 aa27.35■■□□□ 1.97
CD40-202ENST00000372285 NCOA2Q15596 1464 aa27.35■■□□□ 1.97
CD40-202ENST00000372285 ARHGEF11O15085 1522 aa27.34■■□□□ 1.97
CD40-202ENST00000372285 HNRNPUL2Q1KMD3 747 aaKnown RBP27.31■■□□□ 1.96
CD40-202ENST00000372285 ARID3CA6NKF2 412 aa27.27■■□□□ 1.96
CD40-202ENST00000372285 CDK11AQ9UQ88 783 aaPredicted RBP27.26■■□□□ 1.95
CD40-202ENST00000372285 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.26■■□□□ 1.95
CD40-202ENST00000372285 FGD6Q6ZV73 1430 aa27.25■■□□□ 1.95
CD40-202ENST00000372285 MYOM3Q5VTT5 1437 aa27.25■■□□□ 1.95
CD40-202ENST00000372285 UACAQ9BZF9 1416 aa27.23■■□□□ 1.95
CD40-202ENST00000372285 ATP10BO94823 1461 aa27.22■■□□□ 1.95
CD40-202ENST00000372285 TROQ12816 1431 aaPredicted RBP27.2■■□□□ 1.94
CD40-202ENST00000372285 ADCY10Q96PN6 1610 aa27.19■■□□□ 1.94
CD40-202ENST00000372285 OSCARQ8IYS5 282 aa27.19■■□□□ 1.94
CD40-202ENST00000372285 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.19■■□□□ 1.94
CD40-202ENST00000372285 ABCC2Q92887 1545 aa27.17■■□□□ 1.94
CD40-202ENST00000372285 FAM50AQ14320 339 aaKnown RBP27.14■■□□□ 1.94
CD40-202ENST00000372285 PTPN23Q9H3S7 1636 aa27.14■■□□□ 1.93
CD40-202ENST00000372285 UHRF1BP1LA0JNW5 1464 aa27.12■■□□□ 1.93
CD40-202ENST00000372285 ZEB1P37275 1124 aaPredicted RBP27.11■■□□□ 1.93
CD40-202ENST00000372285 MIA2Q96PC5 1412 aa27.11■■□□□ 1.93
CD40-202ENST00000372285 TCOF1Q13428 1488 aaKnown RBP27.1■■□□□ 1.93
CD40-202ENST00000372285 KIF14Q15058 1648 aa27.08■■□□□ 1.93
CD40-202ENST00000372285 PLEKHD1A6NEE1 506 aa27.07■■□□□ 1.92
CD40-202ENST00000372285 CCER1Q8TC90 406 aaPredicted RBP27.07■■□□□ 1.92
CD40-202ENST00000372285 ITGAEP38570 1179 aa27.06■■□□□ 1.92
CD40-202ENST00000372285 ITSN2Q9NZM3 1697 aa27.05■■□□□ 1.92
CD40-202ENST00000372285 KDM5BQ9UGL1 1544 aa27■■□□□ 1.91
CD40-202ENST00000372285 ZCCHC11Q5TAX3 1644 aaKnown RBP27■■□□□ 1.91
CD40-202ENST00000372285 ABCC10Q5T3U5 1492 aa26.99■■□□□ 1.91
CD40-202ENST00000372285 GPATCH8Q9UKJ3 1502 aaKnown RBP26.97■■□□□ 1.91
CD40-202ENST00000372285 CDC42BPAQ5VT25 1732 aa26.96■■□□□ 1.91
CD40-202ENST00000372285 SETD5Q9C0A6 1442 aa26.94■■□□□ 1.9
CD40-202ENST00000372285 PTPRKQ15262 1439 aa26.92■■□□□ 1.9
CD40-202ENST00000372285 RAB3GAP2Q9H2M9 1393 aa26.89■■□□□ 1.89
CD40-202ENST00000372285 DNMT1P26358 1616 aaKnown RBP26.86■■□□□ 1.89
CD40-202ENST00000372285 CFDP1Q9UEE9 299 aaPredicted RBP26.86■■□□□ 1.89
CD40-202ENST00000372285 CAMSAP2Q08AD1 1489 aa26.85■■□□□ 1.89
CD40-202ENST00000372285 HFM1A2PYH4 1435 aa26.83■■□□□ 1.89
CD40-202ENST00000372285 PREX2Q70Z35 1606 aa26.83■■□□□ 1.89
CD40-202ENST00000372285 DHX57Q6P158 1386 aaKnown RBP26.83■■□□□ 1.88
CD40-202ENST00000372285 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.81■■□□□ 1.88
CD40-202ENST00000372285 CDC42BPBQ9Y5S2 1711 aa26.81■■□□□ 1.88
CD40-202ENST00000372285 ZNF644Q9H582 1327 aaPredicted RBP26.81■■□□□ 1.88
CD40-202ENST00000372285 TTC37Q6PGP7 1564 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms