RNA–Protein interactions for RNA: ENST00000371605.7

ABCA2-203, Transcript of ATP binding cassette subfamily A member 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ABCA2, Length 8,151 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-203ENST00000371605 AMER1Q5JTC6 1135 aaPredicted RBP18.3■□□□□ 0.52
ABCA2-203ENST00000371605 DNTTIP2Q5QJE6 756 aaKnown RBP18.26■□□□□ 0.51
ABCA2-203ENST00000371605 ARID3CA6NKF2 412 aa18.24■□□□□ 0.51
ABCA2-203ENST00000371605 NCLP19338 710 aaKnown RBP18.21■□□□□ 0.51
ABCA2-203ENST00000371605 CDK11BP21127 795 aaKnown RBP18.19■□□□□ 0.5
ABCA2-203ENST00000371605 PTMAP06454 111 aaKnown RBP18.18■□□□□ 0.5
ABCA2-203ENST00000371605 WDR43Q15061 677 aaKnown RBP eCLIP18.14■□□□□ 0.49
ABCA2-203ENST00000371605 ARID3AQ99856 593 aa18.13■□□□□ 0.49
ABCA2-203ENST00000371605 GOLGA6L22H0YM25 854 aa18.13■□□□□ 0.49
ABCA2-203ENST00000371605 TPRNQ4KMQ1 711 aa18.12■□□□□ 0.49
ABCA2-203ENST00000371605 RGS3P49796 1198 aa18.11■□□□□ 0.49
ABCA2-203ENST00000371605 EIF4G2P78344 907 aaKnown RBP eCLIP18.1■□□□□ 0.49
ABCA2-203ENST00000371605 CHIC2Q9UKJ5 165 aa18.08■□□□□ 0.49
ABCA2-203ENST00000371605 ZNF777Q9ULD5 760 aaPredicted RBP18.08■□□□□ 0.48
ABCA2-203ENST00000371605 KDM2AQ9Y2K7 1162 aa18.04■□□□□ 0.48
ABCA2-203ENST00000371605 L1TD1Q5T7N2 865 aaKnown RBP18.02■□□□□ 0.48
ABCA2-203ENST00000371605 SPRYD3Q8NCJ5 442 aa18.02■□□□□ 0.47
ABCA2-203ENST00000371605 MSNP26038 577 aaKnown RBP18■□□□□ 0.47
ABCA2-203ENST00000371605 CEP162Q5TB80 1403 aa18■□□□□ 0.47
ABCA2-203ENST00000371605 PNNQ9H307 717 aaKnown RBP17.99■□□□□ 0.47
ABCA2-203ENST00000371605 VSIG10Q8N0Z9 540 aa17.99■□□□□ 0.47
ABCA2-203ENST00000371605 ZBTB7CA1YPR0 619 aa17.98■□□□□ 0.47
ABCA2-203ENST00000371605 GZF1Q9H116 711 aaPredicted RBP17.98■□□□□ 0.47
ABCA2-203ENST00000371605 TIMELESSQ9UNS1 1208 aa17.98■□□□□ 0.47
ABCA2-203ENST00000371605 PLCB2Q00722 1185 aa17.97■□□□□ 0.47
ABCA2-203ENST00000371605 IPO9Q96P70 1041 aaKnown RBP17.95■□□□□ 0.46
ABCA2-203ENST00000371605 HSP90AA2PQ14568 343 aaPredicted RBP17.95■□□□□ 0.46
ABCA2-203ENST00000371605 CLIP1P30622 1438 aa17.95■□□□□ 0.46
ABCA2-203ENST00000371605 PABPN1Q86U42 306 aaKnown RBP eCLIP17.95■□□□□ 0.467e-6■□□□□ 8.8
ABCA2-203ENST00000371605 SIN3AQ96ST3 1273 aa17.94■□□□□ 0.46
ABCA2-203ENST00000371605 SCRIBQ14160 1630 aa17.93■□□□□ 0.46
ABCA2-203ENST00000371605 PRKCSHP14314 528 aaPredicted RBP17.92■□□□□ 0.46
ABCA2-203ENST00000371605 MYH16Q9H6N6 1097 aa17.92■□□□□ 0.46
ABCA2-203ENST00000371605 HSP90AB1P08238 724 aaKnown RBP17.9■□□□□ 0.46
ABCA2-203ENST00000371605 ANO8Q9HCE9 1232 aaPredicted RBP17.9■□□□□ 0.46
ABCA2-203ENST00000371605 RSPH6AQ9H0K4 717 aa17.87■□□□□ 0.45
ABCA2-203ENST00000371605 SLKQ9H2G2 1235 aaPredicted RBP17.86■□□□□ 0.45
ABCA2-203ENST00000371605 KCNH8Q96L42 1107 aa17.85■□□□□ 0.45
ABCA2-203ENST00000371605 RRP7BPQ9NSQ0 103 aa17.85■□□□□ 0.45
ABCA2-203ENST00000371605 CCER2I3L3R5 266 aa17.83■□□□□ 0.44
ABCA2-203ENST00000371605 CHAF1AQ13111 956 aaPredicted RBP17.82■□□□□ 0.44
ABCA2-203ENST00000371605 FTSJ3Q8IY81 847 aaKnown RBP17.82■□□□□ 0.44
ABCA2-203ENST00000371605 FRAT1Q92837 279 aaPredicted RBP17.8■□□□□ 0.44
ABCA2-203ENST00000371605 FBLN2P98095 1184 aa17.79■□□□□ 0.44
ABCA2-203ENST00000371605 HSCBQ8IWL3 235 aa17.79■□□□□ 0.44
ABCA2-203ENST00000371605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.78■□□□□ 0.441e-6■□□□□ 9.5
ABCA2-203ENST00000371605 CHGAP10645 457 aaKnown RBP17.77■□□□□ 0.44
ABCA2-203ENST00000371605 GOLGA6L3A6NEY3 463 aa17.75■□□□□ 0.43
ABCA2-203ENST00000371605 NEUROD2Q15784 382 aa17.75■□□□□ 0.43
ABCA2-203ENST00000371605 GSE1Q14687 1217 aa17.75■□□□□ 0.43
ABCA2-203ENST00000371605 GOLGA3Q08378 1498 aa17.74■□□□□ 0.43
ABCA2-203ENST00000371605 ZCCHC6Q5VYS8 1495 aaKnown RBP17.73■□□□□ 0.43
ABCA2-203ENST00000371605 MTUS2Q5JR59 1369 aa17.73■□□□□ 0.43
ABCA2-203ENST00000371605 FANCIQ9NVI1 1328 aa17.73■□□□□ 0.43
ABCA2-203ENST00000371605 TCERG1O14776 1098 aaKnown RBP17.72■□□□□ 0.43
ABCA2-203ENST00000371605 ZRSR1Q15695 479 aaKnown RBP17.72■□□□□ 0.43
ABCA2-203ENST00000371605 CASC1Q6TDU7 716 aa17.72■□□□□ 0.43
ABCA2-203ENST00000371605 ABCC9O60706 1549 aa17.72■□□□□ 0.43
ABCA2-203ENST00000371605 USP35Q9P2H5 1018 aa17.71■□□□□ 0.43
ABCA2-203ENST00000371605 CC2D1BQ5T0F9 858 aaKnown RBP17.68■□□□□ 0.42
ABCA2-203ENST00000371605 SLC4A3P48751 1232 aa17.68■□□□□ 0.42
ABCA2-203ENST00000371605 PKNOX2Q96KN3 472 aa17.67■□□□□ 0.42
ABCA2-203ENST00000371605 TNNT3P45378 269 aaPredicted RBP17.67■□□□□ 0.42
ABCA2-203ENST00000371605 DRC7Q8IY82 874 aa17.66■□□□□ 0.42
ABCA2-203ENST00000371605 A0A0U1RQG5 324 aaPredicted RBP17.65■□□□□ 0.42
ABCA2-203ENST00000371605 KNSTRNQ9Y448 316 aa17.65■□□□□ 0.42
ABCA2-203ENST00000371605 RCAN3Q9UKA8 241 aa17.64■□□□□ 0.41
ABCA2-203ENST00000371605 IL27Q8NEV9 243 aa17.63■□□□□ 0.41
ABCA2-203ENST00000371605 CARD11Q9BXL7 1154 aa17.63■□□□□ 0.41
ABCA2-203ENST00000371605 RGL3Q3MIN7 710 aa17.63■□□□□ 0.41
ABCA2-203ENST00000371605 GBP4Q96PP9 640 aa17.62■□□□□ 0.41
ABCA2-203ENST00000371605 TNIKQ9UKE5 1360 aa17.61■□□□□ 0.41
ABCA2-203ENST00000371605 KIAA2012Q0VF49 1180 aa17.61■□□□□ 0.41
ABCA2-203ENST00000371605 SENP3Q9H4L4 574 aaPredicted RBP17.58■□□□□ 0.4
ABCA2-203ENST00000371605 GOLGA6L6A8MZA4 724 aa17.57■□□□□ 0.4
ABCA2-203ENST00000371605 TAOK2Q9UL54 1235 aa17.57■□□□□ 0.4
ABCA2-203ENST00000371605 CCNB3Q8WWL7 1395 aa17.55■□□□□ 0.4
ABCA2-203ENST00000371605 HSPA5P11021 654 aaKnown RBP17.54■□□□□ 0.4
ABCA2-203ENST00000371605 BAZ1BQ9UIG0 1483 aaKnown RBP17.54■□□□□ 0.4
ABCA2-203ENST00000371605 PDE4AP27815 886 aa17.54■□□□□ 0.4
ABCA2-203ENST00000371605 NUDCQ9Y266 331 aa17.52■□□□□ 0.4
ABCA2-203ENST00000371605 FAM13BQ9NYF5 915 aa17.51■□□□□ 0.39
ABCA2-203ENST00000371605 FOXD4L1Q9NU39 408 aa17.51■□□□□ 0.39
ABCA2-203ENST00000371605 GOLGA6L4A6NEF3 574 aa17.5■□□□□ 0.39
ABCA2-203ENST00000371605 NRDCO43847 1150 aa17.5■□□□□ 0.39
ABCA2-203ENST00000371605 BRPF3Q9ULD4 1205 aa17.5■□□□□ 0.39
ABCA2-203ENST00000371605 EEA1Q15075 1411 aa17.49■□□□□ 0.39
ABCA2-203ENST00000371605 MFAP1P55081 439 aaKnown RBP17.49■□□□□ 0.39
ABCA2-203ENST00000371605 TSPY4P0CV99 314 aa17.49■□□□□ 0.39
ABCA2-203ENST00000371605 TSPY10P0CW01 314 aa17.49■□□□□ 0.39
ABCA2-203ENST00000371605 PTMSP20962 102 aa17.49■□□□□ 0.39
ABCA2-203ENST00000371605 PODXL2Q9NZ53 605 aa17.48■□□□□ 0.39
ABCA2-203ENST00000371605 CFAP53Q96M91 514 aa17.47■□□□□ 0.39
ABCA2-203ENST00000371605 STAG3Q9UJ98 1225 aa17.47■□□□□ 0.39
ABCA2-203ENST00000371605 CEP164Q9UPV0 1460 aa17.45■□□□□ 0.38
ABCA2-203ENST00000371605 CALD1Q05682 793 aaKnown RBP17.45■□□□□ 0.38
ABCA2-203ENST00000371605 ZNF771Q7L3S4 317 aaPredicted RBP17.42■□□□□ 0.38
ABCA2-203ENST00000371605 SETD5Q9C0A6 1442 aa17.42■□□□□ 0.38
ABCA2-203ENST00000371605 RSF1Q96T23 1441 aaPredicted RBP17.42■□□□□ 0.38
ABCA2-203ENST00000371605 NAP1L2Q9ULW6 460 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms