RNA–Protein interactions for RNA: ENST00000371335.4

LAMP2-202, Transcript of lysosomal associated membrane protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMP2, Length 4,030 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP2-202ENST00000371335 PRKCSHP14314 528 aaPredicted RBP11.81□□□□□ -0.52
LAMP2-202ENST00000371335 RTL5Q5HYW3 569 aaPredicted RBP11.81□□□□□ -0.52
LAMP2-202ENST00000371335 KCNH8Q96L42 1107 aa11.81□□□□□ -0.52
LAMP2-202ENST00000371335 VPS8Q8N3P4 1428 aa11.79□□□□□ -0.52
LAMP2-202ENST00000371335 MAP3K1Q13233 1512 aa11.79□□□□□ -0.52
LAMP2-202ENST00000371335 ARHGAP35Q9NRY4 1499 aa11.79□□□□□ -0.52
LAMP2-202ENST00000371335 NESP48681 1621 aa11.79□□□□□ -0.52
LAMP2-202ENST00000371335 CSRNP3Q8WYN3 585 aa11.78□□□□□ -0.52
LAMP2-202ENST00000371335 CUX2O14529 1486 aa11.77□□□□□ -0.52
LAMP2-202ENST00000371335 POLA1P09884 1462 aaPredicted RBP11.77□□□□□ -0.53
LAMP2-202ENST00000371335 RANGAP1P46060 587 aaPredicted RBP11.77□□□□□ -0.53
LAMP2-202ENST00000371335 FANCD2Q9BXW9 1451 aa11.76□□□□□ -0.53
LAMP2-202ENST00000371335 UBTFP17480 764 aaKnown RBP11.76□□□□□ -0.53
LAMP2-202ENST00000371335 RTN4Q9NQC3 1192 aaKnown RBP11.73□□□□□ -0.53
LAMP2-202ENST00000371335 SUPT16HQ9Y5B9 1047 aaKnown RBP11.73□□□□□ -0.53
LAMP2-202ENST00000371335 IGF1RP08069 1367 aa11.73□□□□□ -0.53
LAMP2-202ENST00000371335 THOC2Q8NI27 1593 aaKnown RBP11.71□□□□□ -0.54
LAMP2-202ENST00000371335 NBR1Q14596 966 aa11.7□□□□□ -0.54
LAMP2-202ENST00000371335 TIAM1Q13009 1591 aa11.69□□□□□ -0.54
LAMP2-202ENST00000371335 PCF11O94913 1555 aaKnown RBP11.69□□□□□ -0.54
LAMP2-202ENST00000371335 SNAPC4Q5SXM2 1469 aa11.68□□□□□ -0.54
LAMP2-202ENST00000371335 WDR62O43379 1518 aa11.67□□□□□ -0.54
LAMP2-202ENST00000371335 TSHZ2Q9NRE2 1034 aa11.67□□□□□ -0.54
LAMP2-202ENST00000371335 KIF27Q86VH2 1401 aa11.67□□□□□ -0.54
LAMP2-202ENST00000371335 RRBP1Q9P2E9 1410 aaKnown RBP11.66□□□□□ -0.54
LAMP2-202ENST00000371335 ARHGEF11O15085 1522 aa11.65□□□□□ -0.54
LAMP2-202ENST00000371335 ADAMTS12P58397 1594 aa11.65□□□□□ -0.54
LAMP2-202ENST00000371335 CCDC136Q96JN2 1154 aa11.64□□□□□ -0.55
LAMP2-202ENST00000371335 RAD54L2Q9Y4B4 1467 aa11.63□□□□□ -0.55
LAMP2-202ENST00000371335 EFCAB5A4FU69 1503 aa11.63□□□□□ -0.55
LAMP2-202ENST00000371335 AQRO60306 1485 aaKnown RBP eCLIP11.62□□□□□ -0.55
LAMP2-202ENST00000371335 KANK4Q5T7N3 995 aaPredicted RBP11.61□□□□□ -0.55
LAMP2-202ENST00000371335 APLP2Q06481 763 aa11.61□□□□□ -0.55
LAMP2-202ENST00000371335 DNAJC5BQ9UF47 199 aa11.61□□□□□ -0.55
LAMP2-202ENST00000371335 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.6□□□□□ -0.55
LAMP2-202ENST00000371335 DHX57Q6P158 1386 aaKnown RBP11.6□□□□□ -0.55
LAMP2-202ENST00000371335 ITGAEP38570 1179 aa11.59□□□□□ -0.55
LAMP2-202ENST00000371335 CNGB1Q14028 1251 aaPredicted RBP11.58□□□□□ -0.56
LAMP2-202ENST00000371335 FKBP8Q14318 412 aa11.58□□□□□ -0.56
LAMP2-202ENST00000371335 MAGI3Q5TCQ9 1506 aa11.55□□□□□ -0.56
LAMP2-202ENST00000371335 GRIN2BQ13224 1484 aa11.54□□□□□ -0.56
LAMP2-202ENST00000371335 DAXXQ9UER7 740 aaPredicted RBP11.54□□□□□ -0.56
LAMP2-202ENST00000371335 CDK11AQ9UQ88 783 aaPredicted RBP11.53□□□□□ -0.56
LAMP2-202ENST00000371335 FYCO1Q9BQS8 1478 aa11.53□□□□□ -0.56
LAMP2-202ENST00000371335 MAPKBP1O60336 1514 aa11.52□□□□□ -0.56
LAMP2-202ENST00000371335 EIF4G3O43432 1585 aaKnown RBP11.52□□□□□ -0.57
LAMP2-202ENST00000371335 HIRIP3Q9BW71 556 aaPredicted RBP11.51□□□□□ -0.57
LAMP2-202ENST00000371335 LRRC9Q6ZRR7 1453 aa11.5□□□□□ -0.57
LAMP2-202ENST00000371335 UGGT2Q9NYU1 1516 aa11.48□□□□□ -0.57
LAMP2-202ENST00000371335 CARMIL1Q5VZK9 1371 aa11.47□□□□□ -0.57
LAMP2-202ENST00000371335 GCC2Q8IWJ2 1684 aa11.47□□□□□ -0.57
LAMP2-202ENST00000371335 KDM5BQ9UGL1 1544 aa11.47□□□□□ -0.57
LAMP2-202ENST00000371335 MRC2Q9UBG0 1479 aa11.46□□□□□ -0.57
LAMP2-202ENST00000371335 ANO8Q9HCE9 1232 aaPredicted RBP11.46□□□□□ -0.57
LAMP2-202ENST00000371335 ADCY10Q96PN6 1610 aa11.46□□□□□ -0.57
LAMP2-202ENST00000371335 CASKIN1Q8WXD9 1431 aa11.46□□□□□ -0.58
LAMP2-202ENST00000371335 NPM2Q86SE8 214 aaKnown RBP11.44□□□□□ -0.58
LAMP2-202ENST00000371335 GAPVD1Q14C86 1478 aa11.44□□□□□ -0.58
LAMP2-202ENST00000371335 MSH5O43196 834 aa11.44□□□□□ -0.58
LAMP2-202ENST00000371335 CEP170Q5SW79 1584 aa11.43□□□□□ -0.58
LAMP2-202ENST00000371335 KIAA0556O60303 1618 aa11.42□□□□□ -0.58
LAMP2-202ENST00000371335 GLIPR1L2Q4G1C9 344 aa11.42□□□□□ -0.58
LAMP2-202ENST00000371335 DENND4BO75064 1496 aaPredicted RBP11.42□□□□□ -0.58
LAMP2-202ENST00000371335 DISP1Q96F81 1524 aa11.42□□□□□ -0.58
LAMP2-202ENST00000371335 IQGAP2Q13576 1575 aa11.42□□□□□ -0.58
LAMP2-202ENST00000371335 CROCC2H7BZ55 1655 aa11.41□□□□□ -0.58
LAMP2-202ENST00000371335 SIN3AQ96ST3 1273 aa11.41□□□□□ -0.58
LAMP2-202ENST00000371335 DEKP35659 375 aaKnown RBP11.41□□□□□ -0.58
LAMP2-202ENST00000371335 PDS5BQ9NTI5 1447 aa11.41□□□□□ -0.58
LAMP2-202ENST00000371335 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.41□□□□□ -0.58
LAMP2-202ENST00000371335 SHROOM2Q13796 1616 aa11.39□□□□□ -0.59
LAMP2-202ENST00000371335 ZNF608Q9ULD9 1512 aaPredicted RBP11.39□□□□□ -0.59
LAMP2-202ENST00000371335 TRIM52Q96A61 297 aa11.39□□□□□ -0.59
LAMP2-202ENST00000371335 TCOF1Q13428 1488 aaKnown RBP11.39□□□□□ -0.59
LAMP2-202ENST00000371335 IRX6P78412 446 aaPredicted RBP11.38□□□□□ -0.59
LAMP2-202ENST00000371335 DDX10Q13206 875 aaKnown RBP11.38□□□□□ -0.59
LAMP2-202ENST00000371335 PHLDB1Q86UU1 1377 aa11.38□□□□□ -0.59
LAMP2-202ENST00000371335 SUPT6HQ7KZ85 1726 aaKnown RBP11.36□□□□□ -0.59
LAMP2-202ENST00000371335 ARXQ96QS3 562 aa11.36□□□□□ -0.59
LAMP2-202ENST00000371335 RBM19Q9Y4C8 960 aaKnown RBP11.36□□□□□ -0.59
LAMP2-202ENST00000371335 KDM6BO15054 1643 aa11.35□□□□□ -0.59
LAMP2-202ENST00000371335 IFT140Q96RY7 1462 aa11.35□□□□□ -0.59
LAMP2-202ENST00000371335 HECW1Q76N89 1606 aa11.34□□□□□ -0.59
LAMP2-202ENST00000371335 PTPN23Q9H3S7 1636 aa11.33□□□□□ -0.6
LAMP2-202ENST00000371335 EHBP1L1Q8N3D4 1523 aa11.33□□□□□ -0.6
LAMP2-202ENST00000371335 FHOD3Q2V2M9 1422 aa11.33□□□□□ -0.6
LAMP2-202ENST00000371335 FHAD1B1AJZ9 1412 aa11.33□□□□□ -0.6
LAMP2-202ENST00000371335 PTPRKQ15262 1439 aa11.33□□□□□ -0.6
LAMP2-202ENST00000371335 RAB3GAP2Q9H2M9 1393 aa11.32□□□□□ -0.6
LAMP2-202ENST00000371335 PPP1R15AO75807 674 aaPredicted RBP11.3□□□□□ -0.6
LAMP2-202ENST00000371335 CDC42BPAQ5VT25 1732 aa11.3□□□□□ -0.6
LAMP2-202ENST00000371335 ANP32AP39687 249 aaKnown RBP11.3□□□□□ -0.6
LAMP2-202ENST00000371335 RAPGEF6Q8TEU7 1601 aa11.3□□□□□ -0.6
LAMP2-202ENST00000371335 NUP160Q12769 1436 aa11.29□□□□□ -0.6
LAMP2-202ENST00000371335 ABCA8O94911 1581 aa11.28□□□□□ -0.6
LAMP2-202ENST00000371335 POLR3GLQ9BT43 218 aa11.28□□□□□ -0.6
LAMP2-202ENST00000371335 GRIN2AQ12879 1464 aa11.28□□□□□ -0.6
LAMP2-202ENST00000371335 MYT1LQ9UL68 1186 aa11.27□□□□□ -0.6
LAMP2-202ENST00000371335 POLR1AO95602 1720 aaPredicted RBP11.27□□□□□ -0.6
LAMP2-202ENST00000371335 CHD1O14646 1710 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms