RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 RUSC2Q8N2Y8 1516 aa23.1■■□□□ 1.29
RPF1-201ENST00000370654 KIF27Q86VH2 1401 aa23.05■■□□□ 1.28
RPF1-201ENST00000370654 KIAA0586Q9BVV6 1533 aa22.97■■□□□ 1.27
RPF1-201ENST00000370654 CUL7Q14999 1698 aa22.97■■□□□ 1.27
RPF1-201ENST00000370654 CARMIL1Q5VZK9 1371 aa22.93■■□□□ 1.26
RPF1-201ENST00000370654 KIF13AQ9H1H9 1805 aa22.9■■□□□ 1.26
RPF1-201ENST00000370654 ADCY10Q96PN6 1610 aa22.88■■□□□ 1.25
RPF1-201ENST00000370654 TTBK1Q5TCY1 1321 aaPredicted RBP22.8■■□□□ 1.24
RPF1-201ENST00000370654 FAM69CQ0P6D2 419 aa22.79■■□□□ 1.24
RPF1-201ENST00000370654 ABCC10Q5T3U5 1492 aa22.79■■□□□ 1.24
RPF1-201ENST00000370654 MAPKBP1O60336 1514 aa22.78■■□□□ 1.24
RPF1-201ENST00000370654 NPM1P06748 294 aaKnown RBP eCLIP22.78■■□□□ 1.24
RPF1-201ENST00000370654 PTPRGP23470 1445 aa22.76■■□□□ 1.23
RPF1-201ENST00000370654 IQGAP2Q13576 1575 aa22.74■■□□□ 1.23
RPF1-201ENST00000370654 DIP2BQ9P265 1576 aa22.74■■□□□ 1.23
RPF1-201ENST00000370654 TNIKQ9UKE5 1360 aa22.72■■□□□ 1.23
RPF1-201ENST00000370654 RAPGEF2Q9Y4G8 1499 aa22.71■■□□□ 1.23
RPF1-201ENST00000370654 DISP1Q96F81 1524 aa22.7■■□□□ 1.22
RPF1-201ENST00000370654 CARMIL2Q6F5E8 1435 aa22.68■■□□□ 1.22
RPF1-201ENST00000370654 ABCC2Q92887 1545 aa22.63■■□□□ 1.21
RPF1-201ENST00000370654 UGGT2Q9NYU1 1516 aa22.61■■□□□ 1.21
RPF1-201ENST00000370654 TSPOAP1O95153 1857 aa22.6■■□□□ 1.21
RPF1-201ENST00000370654 UACAQ9BZF9 1416 aa22.59■■□□□ 1.21
RPF1-201ENST00000370654 UHRF1BP1LA0JNW5 1464 aa22.58■■□□□ 1.21
RPF1-201ENST00000370654 ASXL2Q76L83 1435 aa22.58■■□□□ 1.2
RPF1-201ENST00000370654 KIAA0556O60303 1618 aa22.57■■□□□ 1.2
RPF1-201ENST00000370654 PRXQ9BXM0 1461 aa22.52■■□□□ 1.2
RPF1-201ENST00000370654 KDM6BO15054 1643 aa22.5■■□□□ 1.19
RPF1-201ENST00000370654 PLB1Q6P1J6 1458 aa22.5■■□□□ 1.19
RPF1-201ENST00000370654 KDM5BQ9UGL1 1544 aa22.5■■□□□ 1.19
RPF1-201ENST00000370654 CTTNBP2Q8WZ74 1663 aa22.49■■□□□ 1.19
RPF1-201ENST00000370654 PPRC1Q5VV67 1664 aaKnown RBP22.48■■□□□ 1.19
RPF1-201ENST00000370654 GLI2P10070 1586 aa22.47■■□□□ 1.19
RPF1-201ENST00000370654 ZCCHC11Q5TAX3 1644 aaKnown RBP22.46■■□□□ 1.19
RPF1-201ENST00000370654 EPRSP07814 1512 aaKnown RBP22.44■■□□□ 1.18
RPF1-201ENST00000370654 COL17A1Q9UMD9 1497 aaPredicted RBP22.38■■□□□ 1.17
RPF1-201ENST00000370654 ABCA8O94911 1581 aa22.38■■□□□ 1.17
RPF1-201ENST00000370654 KDM4FA0A1W2PPD8 638 aa22.38■■□□□ 1.17
RPF1-201ENST00000370654 GOLGA3Q08378 1498 aa22.37■■□□□ 1.17
RPF1-201ENST00000370654 MAP3K4Q9Y6R4 1608 aa22.37■■□□□ 1.17
RPF1-201ENST00000370654 P3H3Q8IVL6 736 aa22.35■■□□□ 1.17
RPF1-201ENST00000370654 CSRNP3Q8WYN3 585 aa22.35■■□□□ 1.17
RPF1-201ENST00000370654 WDR7Q9Y4E6 1490 aa22.32■■□□□ 1.16
RPF1-201ENST00000370654 ARID3CA6NKF2 412 aa22.28■■□□□ 1.16
RPF1-201ENST00000370654 KCNH8Q96L42 1107 aa22.27■■□□□ 1.16
RPF1-201ENST00000370654 FAM9AQ8IZU1 332 aaPredicted RBP22.24■■□□□ 1.15
RPF1-201ENST00000370654 TEX14Q8IWB6 1497 aa22.23■■□□□ 1.15
RPF1-201ENST00000370654 SAMD9Q5K651 1589 aa22.22■■□□□ 1.15
RPF1-201ENST00000370654 ATP10BO94823 1461 aa22.21■■□□□ 1.15
RPF1-201ENST00000370654 CD109Q6YHK3 1445 aa22.2■■□□□ 1.14
RPF1-201ENST00000370654 RANGAP1P46060 587 aaPredicted RBP22.2■■□□□ 1.14
RPF1-201ENST00000370654 MAGI3Q5TCQ9 1506 aa22.16■■□□□ 1.14
RPF1-201ENST00000370654 CFAP43Q8NDM7 1665 aa22.16■■□□□ 1.14
RPF1-201ENST00000370654 EEA1Q15075 1411 aa22.15■■□□□ 1.14
RPF1-201ENST00000370654 ADGRL1O94910 1474 aa22.14■■□□□ 1.13
RPF1-201ENST00000370654 FHOD3Q2V2M9 1422 aa22.12■■□□□ 1.13
RPF1-201ENST00000370654 RAPGEF6Q8TEU7 1601 aa22.11■■□□□ 1.13
RPF1-201ENST00000370654 NUP153P49790 1475 aaKnown RBP22.07■■□□□ 1.12
RPF1-201ENST00000370654 EHMT2Q96KQ7 1210 aa22.05■■□□□ 1.12
RPF1-201ENST00000370654 KIF21BO75037 1637 aa22.04■■□□□ 1.12
RPF1-201ENST00000370654 ABCA9Q8IUA7 1624 aa22.03■■□□□ 1.12
RPF1-201ENST00000370654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.02■■□□□ 1.12
RPF1-201ENST00000370654 HNRNPUL2Q1KMD3 747 aaKnown RBP22.02■■□□□ 1.12
RPF1-201ENST00000370654 CHIC1Q5VXU3 224 aa22.02■■□□□ 1.12
RPF1-201ENST00000370654 ARAP3Q8WWN8 1544 aa21.99■■□□□ 1.11
RPF1-201ENST00000370654 RAPGEF3O95398 923 aa21.95■■□□□ 1.1
RPF1-201ENST00000370654 EFCAB5A4FU69 1503 aa21.93■■□□□ 1.1
RPF1-201ENST00000370654 UBTFP17480 764 aaKnown RBP21.9■■□□□ 1.1
RPF1-201ENST00000370654 PLEKHD1A6NEE1 506 aa21.89■■□□□ 1.1
RPF1-201ENST00000370654 CDK13Q14004 1512 aaKnown RBP21.89■■□□□ 1.09
RPF1-201ENST00000370654 NEO1Q92859 1461 aa21.88■■□□□ 1.09
RPF1-201ENST00000370654 FRMPD1Q5SYB0 1578 aa21.88■■□□□ 1.09
RPF1-201ENST00000370654 PHLDB1Q86UU1 1377 aa21.87■■□□□ 1.09
RPF1-201ENST00000370654 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.86■■□□□ 1.09
RPF1-201ENST00000370654 ARHGAP35Q9NRY4 1499 aa21.85■■□□□ 1.09
RPF1-201ENST00000370654 TTC37Q6PGP7 1564 aa21.84■■□□□ 1.09
RPF1-201ENST00000370654 HECW2Q9P2P5 1572 aa21.82■■□□□ 1.08
RPF1-201ENST00000370654 AKNAQ7Z591 1439 aa21.8■■□□□ 1.08
RPF1-201ENST00000370654 ATP1B4Q9UN42 357 aaPredicted RBP21.79■■□□□ 1.08
RPF1-201ENST00000370654 FANCAO15360 1455 aa21.78■■□□□ 1.08
RPF1-201ENST00000370654 DENND4BO75064 1496 aaPredicted RBP21.75■■□□□ 1.07
RPF1-201ENST00000370654 ADAMTSL3P82987 1691 aa21.75■■□□□ 1.07
RPF1-201ENST00000370654 RICTORQ6R327 1708 aa21.75■■□□□ 1.07
RPF1-201ENST00000370654 FMN1Q68DA7 1419 aa21.75■■□□□ 1.07
RPF1-201ENST00000370654 HECW1Q76N89 1606 aa21.72■■□□□ 1.07
RPF1-201ENST00000370654 LRRIQ1Q96JM4 1722 aa21.71■■□□□ 1.07
RPF1-201ENST00000370654 PTPRMP28827 1452 aa21.7■■□□□ 1.06
RPF1-201ENST00000370654 PLCH2O75038 1416 aa21.7■■□□□ 1.06
RPF1-201ENST00000370654 BCORL1Q5H9F3 1711 aa21.69■■□□□ 1.06
RPF1-201ENST00000370654 ARHGEF40Q8TER5 1519 aa21.69■■□□□ 1.06
RPF1-201ENST00000370654 ARID4BQ4LE39 1312 aaPredicted RBP21.69■■□□□ 1.06
RPF1-201ENST00000370654 KIF14Q15058 1648 aa21.69■■□□□ 1.06
RPF1-201ENST00000370654 YEATS2Q9ULM3 1422 aa21.69■■□□□ 1.06
RPF1-201ENST00000370654 CFAP74Q9C0B2 1584 aa21.68■■□□□ 1.06
RPF1-201ENST00000370654 SIGLEC1Q9BZZ2 1709 aa21.68■■□□□ 1.06
RPF1-201ENST00000370654 MADDQ8WXG6 1647 aa21.66■■□□□ 1.06
RPF1-201ENST00000370654 SCAPERQ9BY12 1400 aa21.65■■□□□ 1.06
RPF1-201ENST00000370654 ZMYM4Q5VZL5 1548 aa21.65■■□□□ 1.06
RPF1-201ENST00000370654 ILDR1Q86SU0 546 aaPredicted RBP21.63■■□□□ 1.05
RPF1-201ENST00000370654 TROQ12816 1431 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms