RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 ACIN1Q9UKV3 1341 aaKnown RBP15.16■□□□□ 0.02
PRPF38B-203ENST00000370025 IFT140Q96RY7 1462 aa15.15■□□□□ 0.02
PRPF38B-203ENST00000370025 ZEB1P37275 1124 aaPredicted RBP15.12■□□□□ 0.01
PRPF38B-203ENST00000370025 AQRO60306 1485 aaKnown RBP eCLIP15.11■□□□□ 0.012e-7■■■■■ 30.5
PRPF38B-203ENST00000370025 PBRM1Q86U86 1689 aa15.11■□□□□ 0.01
PRPF38B-203ENST00000370025 CTTNBP2Q8WZ74 1663 aa15.11■□□□□ 0.01
PRPF38B-203ENST00000370025 GRIN2BQ13224 1484 aa15.09■□□□□ 0.01
PRPF38B-203ENST00000370025 THOC2Q8NI27 1593 aaKnown RBP15.09■□□□□ 0.01
PRPF38B-203ENST00000370025 FHAD1B1AJZ9 1412 aa15.07■□□□□ 0
PRPF38B-203ENST00000370025 EFCAB5A4FU69 1503 aa15.06■□□□□ 0
PRPF38B-203ENST00000370025 ZNF608Q9ULD9 1512 aaPredicted RBP15.05■□□□□ 0
PRPF38B-203ENST00000370025 P3H3Q8IVL6 736 aa15.04■□□□□ -0
PRPF38B-203ENST00000370025 YTHDC1Q96MU7 727 aaKnown RBP15.03■□□□□ -0
PRPF38B-203ENST00000370025 ADAMTS12P58397 1594 aa15.03■□□□□ -0
PRPF38B-203ENST00000370025 FHOD3Q2V2M9 1422 aa15□□□□□ -0.01
PRPF38B-203ENST00000370025 EIF4G3O43432 1585 aaKnown RBP14.99□□□□□ -0.01
PRPF38B-203ENST00000370025 KANK4Q5T7N3 995 aaPredicted RBP14.99□□□□□ -0.01
PRPF38B-203ENST00000370025 MAP3K1Q13233 1512 aa14.98□□□□□ -0.01
PRPF38B-203ENST00000370025 CENPBP07199 599 aaPredicted RBP14.97□□□□□ -0.01
PRPF38B-203ENST00000370025 SNAPC4Q5SXM2 1469 aa14.96□□□□□ -0.01
PRPF38B-203ENST00000370025 FMN1Q68DA7 1419 aa14.96□□□□□ -0.01
PRPF38B-203ENST00000370025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.96□□□□□ -0.02
PRPF38B-203ENST00000370025 ATP1B4Q9UN42 357 aaPredicted RBP14.95□□□□□ -0.02
PRPF38B-203ENST00000370025 SAMD9Q5K651 1589 aa14.95□□□□□ -0.02
PRPF38B-203ENST00000370025 TIAM1Q13009 1591 aa14.94□□□□□ -0.02
PRPF38B-203ENST00000370025 PCF11O94913 1555 aaKnown RBP14.94□□□□□ -0.02
PRPF38B-203ENST00000370025 IQGAP2Q13576 1575 aa14.93□□□□□ -0.02
PRPF38B-203ENST00000370025 MAGI1Q96QZ7 1491 aaPredicted RBP14.93□□□□□ -0.02
PRPF38B-203ENST00000370025 FYCO1Q9BQS8 1478 aa14.93□□□□□ -0.02
PRPF38B-203ENST00000370025 CASKIN1Q8WXD9 1431 aa14.93□□□□□ -0.02
PRPF38B-203ENST00000370025 CCER1Q8TC90 406 aaPredicted RBP14.92□□□□□ -0.02
PRPF38B-203ENST00000370025 HNRNPUL2Q1KMD3 747 aaKnown RBP14.91□□□□□ -0.02
PRPF38B-203ENST00000370025 GRIN2AQ12879 1464 aa14.9□□□□□ -0.02
PRPF38B-203ENST00000370025 CHMP7Q8WUX9 453 aaPredicted RBP14.9□□□□□ -0.02
PRPF38B-203ENST00000370025 DIEXFQ68CQ4 756 aaKnown RBP14.89□□□□□ -0.03
PRPF38B-203ENST00000370025 LRRC9Q6ZRR7 1453 aa14.89□□□□□ -0.03
PRPF38B-203ENST00000370025 CFAP43Q8NDM7 1665 aa14.88□□□□□ -0.03
PRPF38B-203ENST00000370025 KIAA0586Q9BVV6 1533 aa14.88□□□□□ -0.03
PRPF38B-203ENST00000370025 SYNJ2O15056 1496 aa14.87□□□□□ -0.03
PRPF38B-203ENST00000370025 RRBP1Q9P2E9 1410 aaKnown RBP14.85□□□□□ -0.03
PRPF38B-203ENST00000370025 FBLN2P98095 1184 aa14.85□□□□□ -0.03
PRPF38B-203ENST00000370025 UGGT2Q9NYU1 1516 aa14.85□□□□□ -0.03
PRPF38B-203ENST00000370025 CCNB3Q8WWL7 1395 aa14.82□□□□□ -0.04
PRPF38B-203ENST00000370025 MTUS2Q5JR59 1369 aa14.78□□□□□ -0.04
PRPF38B-203ENST00000370025 CEP170Q5SW79 1584 aa14.78□□□□□ -0.04
PRPF38B-203ENST00000370025 NUP160Q12769 1436 aa14.76□□□□□ -0.05
PRPF38B-203ENST00000370025 KIAA0556O60303 1618 aa14.76□□□□□ -0.05
PRPF38B-203ENST00000370025 CCDC18Q5T9S5 1454 aa14.76□□□□□ -0.05
PRPF38B-203ENST00000370025 PHLDB1Q86UU1 1377 aa14.76□□□□□ -0.05
PRPF38B-203ENST00000370025 HECW1Q76N89 1606 aa14.76□□□□□ -0.05
PRPF38B-203ENST00000370025 DISP1Q96F81 1524 aa14.75□□□□□ -0.05
PRPF38B-203ENST00000370025 LRRIQ1Q96JM4 1722 aa14.74□□□□□ -0.05
PRPF38B-203ENST00000370025 JPH4Q96JJ6 628 aa14.72□□□□□ -0.05
PRPF38B-203ENST00000370025 CARMIL2Q6F5E8 1435 aa14.72□□□□□ -0.05
PRPF38B-203ENST00000370025 ITGAEP38570 1179 aa14.72□□□□□ -0.05
PRPF38B-203ENST00000370025 FAM50AQ14320 339 aaKnown RBP14.71□□□□□ -0.05
PRPF38B-203ENST00000370025 EHBP1L1Q8N3D4 1523 aa14.7□□□□□ -0.06
PRPF38B-203ENST00000370025 EPRSP07814 1512 aaKnown RBP14.7□□□□□ -0.06
PRPF38B-203ENST00000370025 SUPT6HQ7KZ85 1726 aaKnown RBP14.68□□□□□ -0.06
PRPF38B-203ENST00000370025 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.67□□□□□ -0.06
PRPF38B-203ENST00000370025 NCOA2Q15596 1464 aa14.66□□□□□ -0.06
PRPF38B-203ENST00000370025 RAPGEF6Q8TEU7 1601 aa14.66□□□□□ -0.06
PRPF38B-203ENST00000370025 FGD6Q6ZV73 1430 aa14.65□□□□□ -0.06
PRPF38B-203ENST00000370025 CDK13Q14004 1512 aaKnown RBP14.65□□□□□ -0.06
PRPF38B-203ENST00000370025 CHD1O14646 1710 aa14.64□□□□□ -0.07
PRPF38B-203ENST00000370025 ARID3CA6NKF2 412 aa14.64□□□□□ -0.07
PRPF38B-203ENST00000370025 CDK11AQ9UQ88 783 aaPredicted RBP14.63□□□□□ -0.07
PRPF38B-203ENST00000370025 MYOM3Q5VTT5 1437 aa14.63□□□□□ -0.07
PRPF38B-203ENST00000370025 MAGI3Q5TCQ9 1506 aa14.63□□□□□ -0.07
PRPF38B-203ENST00000370025 BCL11AQ9H165 835 aa14.63□□□□□ -0.07
PRPF38B-203ENST00000370025 NUP153P49790 1475 aaKnown RBP14.62□□□□□ -0.07
PRPF38B-203ENST00000370025 CLSPNQ9HAW4 1339 aa14.6□□□□□ -0.07
PRPF38B-203ENST00000370025 ARHGEF11O15085 1522 aa14.6□□□□□ -0.07
PRPF38B-203ENST00000370025 PRG4Q92954 1404 aaPredicted RBP14.59□□□□□ -0.07
PRPF38B-203ENST00000370025 SETD5Q9C0A6 1442 aa14.59□□□□□ -0.07
PRPF38B-203ENST00000370025 PLB1Q6P1J6 1458 aa14.59□□□□□ -0.07
PRPF38B-203ENST00000370025 DHX57Q6P158 1386 aaKnown RBP14.58□□□□□ -0.07
PRPF38B-203ENST00000370025 RAB3GAP2Q9H2M9 1393 aa14.57□□□□□ -0.08
PRPF38B-203ENST00000370025 PTPN23Q9H3S7 1636 aa14.55□□□□□ -0.08
PRPF38B-203ENST00000370025 PTPRGP23470 1445 aa14.54□□□□□ -0.08
PRPF38B-203ENST00000370025 MIA2Q96PC5 1412 aa14.53□□□□□ -0.08
PRPF38B-203ENST00000370025 ABCA8O94911 1581 aa14.53□□□□□ -0.08
PRPF38B-203ENST00000370025 TROQ12816 1431 aaPredicted RBP14.52□□□□□ -0.09
PRPF38B-203ENST00000370025 MIER1Q8N108 512 aa14.52□□□□□ -0.09
PRPF38B-203ENST00000370025 SHROOM2Q13796 1616 aa14.51□□□□□ -0.09
PRPF38B-203ENST00000370025 TCOF1Q13428 1488 aaKnown RBP14.51□□□□□ -0.09
PRPF38B-203ENST00000370025 PLEKHD1A6NEE1 506 aa14.49□□□□□ -0.09
PRPF38B-203ENST00000370025 PTPRKQ15262 1439 aa14.47□□□□□ -0.09
PRPF38B-203ENST00000370025 ATP10BO94823 1461 aa14.47□□□□□ -0.09
PRPF38B-203ENST00000370025 HFM1A2PYH4 1435 aa14.46□□□□□ -0.1
PRPF38B-203ENST00000370025 CLASP1Q7Z460 1538 aa14.45□□□□□ -0.1
PRPF38B-203ENST00000370025 ADCY10Q96PN6 1610 aa14.45□□□□□ -0.1
PRPF38B-203ENST00000370025 UACAQ9BZF9 1416 aa14.44□□□□□ -0.1
PRPF38B-203ENST00000370025 ZNF316A6NFI3 1004 aaPredicted RBP14.43□□□□□ -0.1
PRPF38B-203ENST00000370025 ITSN2Q9NZM3 1697 aa14.43□□□□□ -0.1
PRPF38B-203ENST00000370025 CFDP1Q9UEE9 299 aaPredicted RBP14.42□□□□□ -0.1
PRPF38B-203ENST00000370025 CHIC2Q9UKJ5 165 aa14.42□□□□□ -0.1
PRPF38B-203ENST00000370025 NAIPQ13075 1403 aa14.41□□□□□ -0.1
PRPF38B-203ENST00000370025 KIF14Q15058 1648 aa14.41□□□□□ -0.1
PRPF38B-203ENST00000370025 ERCC6L2Q5T890 1561 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms