RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 DEKP35659 375 aaKnown RBP14.46□□□□□ -0.09
PRPF38B-201ENST00000370021 MSH5O43196 834 aa14.45□□□□□ -0.1
PRPF38B-201ENST00000370021 VPS8Q8N3P4 1428 aa14.39□□□□□ -0.11
PRPF38B-201ENST00000370021 ATAD2BQ9ULI0 1458 aa14.38□□□□□ -0.11
PRPF38B-201ENST00000370021 SALL2Q9Y467 1007 aaPredicted RBP14.37□□□□□ -0.11
PRPF38B-201ENST00000370021 BIVM-ERCC5R4GMW8 1640 aa14.35□□□□□ -0.11
PRPF38B-201ENST00000370021 TONSLQ96HA7 1378 aa14.35□□□□□ -0.11
PRPF38B-201ENST00000370021 EIF5BO60841 1220 aaKnown RBP14.35□□□□□ -0.11
PRPF38B-201ENST00000370021 ZNF326Q5BKZ1 582 aaKnown RBP14.35□□□□□ -0.11
PRPF38B-201ENST00000370021 CCDC136Q96JN2 1154 aa14.34□□□□□ -0.11
PRPF38B-201ENST00000370021 CEP164Q9UPV0 1460 aa14.34□□□□□ -0.11
PRPF38B-201ENST00000370021 TOP2BQ02880 1626 aa14.33□□□□□ -0.12
PRPF38B-201ENST00000370021 ARID3CA6NKF2 412 aa14.32□□□□□ -0.12
PRPF38B-201ENST00000370021 ANP32AP39687 249 aaKnown RBP14.32□□□□□ -0.12
PRPF38B-201ENST00000370021 MRS2Q9HD23 443 aa14.32□□□□□ -0.12
PRPF38B-201ENST00000370021 BAZ1BQ9UIG0 1483 aaKnown RBP14.32□□□□□ -0.12
PRPF38B-201ENST00000370021 RAB3GAP2Q9H2M9 1393 aa14.31□□□□□ -0.12
PRPF38B-201ENST00000370021 RAPGEF2Q9Y4G8 1499 aa14.31□□□□□ -0.12
PRPF38B-201ENST00000370021 CHIC2Q9UKJ5 165 aa14.3□□□□□ -0.12
PRPF38B-201ENST00000370021 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.3□□□□□ -0.12
PRPF38B-201ENST00000370021 CCNB3Q8WWL7 1395 aa14.3□□□□□ -0.12
PRPF38B-201ENST00000370021 ZBTB47Q9UFB7 747 aaPredicted RBP14.29□□□□□ -0.12
PRPF38B-201ENST00000370021 ANO8Q9HCE9 1232 aaPredicted RBP14.28□□□□□ -0.12
PRPF38B-201ENST00000370021 LAS1LQ9Y4W2 734 aaKnown RBP14.28□□□□□ -0.12
PRPF38B-201ENST00000370021 NOP58Q9Y2X3 529 aaKnown RBP14.27□□□□□ -0.12
PRPF38B-201ENST00000370021 PPP4R2Q9NY27 417 aa14.26□□□□□ -0.13
PRPF38B-201ENST00000370021 CCER2I3L3R5 266 aa14.22□□□□□ -0.13
PRPF38B-201ENST00000370021 DAXXQ9UER7 740 aaPredicted RBP14.22□□□□□ -0.13
PRPF38B-201ENST00000370021 PAK3O75914 559 aaPredicted RBP14.22□□□□□ -0.13
PRPF38B-201ENST00000370021 PRKCSHP14314 528 aaPredicted RBP14.22□□□□□ -0.13
PRPF38B-201ENST00000370021 PPP1R15AO75807 674 aaPredicted RBP14.21□□□□□ -0.13
PRPF38B-201ENST00000370021 RRP7BPQ9NSQ0 103 aa14.2□□□□□ -0.14
PRPF38B-201ENST00000370021 HMGXB3Q12766 1538 aa14.19□□□□□ -0.14
PRPF38B-201ENST00000370021 ERICH3Q5RHP9 1530 aa14.19□□□□□ -0.14
PRPF38B-201ENST00000370021 PRDM2Q13029 1718 aa14.19□□□□□ -0.14
PRPF38B-201ENST00000370021 FANCIQ9NVI1 1328 aa14.17□□□□□ -0.14
PRPF38B-201ENST00000370021 CCDC184Q52MB2 194 aa14.15□□□□□ -0.14
PRPF38B-201ENST00000370021 PRXQ9BXM0 1461 aa14.15□□□□□ -0.14
PRPF38B-201ENST00000370021 FOXD1Q16676 465 aa14.14□□□□□ -0.15
PRPF38B-201ENST00000370021 MYT1LQ9UL68 1186 aa14.14□□□□□ -0.15
PRPF38B-201ENST00000370021 SETD5Q9C0A6 1442 aa14.13□□□□□ -0.15
PRPF38B-201ENST00000370021 NEFMP07197 916 aa14.13□□□□□ -0.15
PRPF38B-201ENST00000370021 IL27Q8NEV9 243 aa14.13□□□□□ -0.15
PRPF38B-201ENST00000370021 HSPA5P11021 654 aaKnown RBP14.12□□□□□ -0.15
PRPF38B-201ENST00000370021 CUX1P39880 1505 aa14.12□□□□□ -0.15
PRPF38B-201ENST00000370021 EIF4G2P78344 907 aaKnown RBP eCLIP14.12□□□□□ -0.15
PRPF38B-201ENST00000370021 ARXQ96QS3 562 aa14.12□□□□□ -0.15
PRPF38B-201ENST00000370021 ARAP1Q96P48 1450 aa14.11□□□□□ -0.15
PRPF38B-201ENST00000370021 NCAPD3P42695 1498 aa14.1□□□□□ -0.15
PRPF38B-201ENST00000370021 WDR97A6NE52 1622 aa14.07□□□□□ -0.16
PRPF38B-201ENST00000370021 TMC1Q8TDI8 760 aa14.06□□□□□ -0.16
PRPF38B-201ENST00000370021 CFTRP13569 1480 aa14.03□□□□□ -0.16
PRPF38B-201ENST00000370021 IPO9Q96P70 1041 aaKnown RBP14.02□□□□□ -0.17
PRPF38B-201ENST00000370021 SLC4A3P48751 1232 aa14□□□□□ -0.17
PRPF38B-201ENST00000370021 CUX2O14529 1486 aa13.99□□□□□ -0.17
PRPF38B-201ENST00000370021 KDM2AQ9Y2K7 1162 aa13.97□□□□□ -0.17
PRPF38B-201ENST00000370021 MTUS2Q5JR59 1369 aa13.97□□□□□ -0.17
PRPF38B-201ENST00000370021 RRBP1Q9P2E9 1410 aaKnown RBP13.97□□□□□ -0.17
PRPF38B-201ENST00000370021 WASHC2AQ641Q2 1341 aa13.96□□□□□ -0.17
PRPF38B-201ENST00000370021 PHLDB1Q86UU1 1377 aa13.96□□□□□ -0.17
PRPF38B-201ENST00000370021 PRKRIP1Q9H875 184 aaPredicted RBP13.95□□□□□ -0.18
PRPF38B-201ENST00000370021 TIMELESSQ9UNS1 1208 aa13.94□□□□□ -0.18
PRPF38B-201ENST00000370021 KIF27Q86VH2 1401 aa13.94□□□□□ -0.18
PRPF38B-201ENST00000370021 ARHGAP35Q9NRY4 1499 aa13.94□□□□□ -0.18
PRPF38B-201ENST00000370021 L3MBTL2Q969R5 705 aa13.93□□□□□ -0.18
PRPF38B-201ENST00000370021 SKAP1Q86WV1 359 aa13.92□□□□□ -0.18
PRPF38B-201ENST00000370021 ZNF777Q9ULD5 760 aaPredicted RBP13.92□□□□□ -0.18
PRPF38B-201ENST00000370021 AKNAQ7Z591 1439 aa13.9□□□□□ -0.18
PRPF38B-201ENST00000370021 BRPF3Q9ULD4 1205 aa13.9□□□□□ -0.18
PRPF38B-201ENST00000370021 SLC4A1APQ9BWU0 796 aaKnown RBP13.9□□□□□ -0.18
PRPF38B-201ENST00000370021 C11orf95C9JLR9 678 aaPredicted RBP13.89□□□□□ -0.19
PRPF38B-201ENST00000370021 EXOC6Q8TAG9 804 aa13.89□□□□□ -0.19
PRPF38B-201ENST00000370021 PLIN1O60240 522 aa13.88□□□□□ -0.19
PRPF38B-201ENST00000370021 ERICH6BQ5W0A0 696 aa13.88□□□□□ -0.19
PRPF38B-201ENST00000370021 MAP3K1Q13233 1512 aa13.87□□□□□ -0.19
PRPF38B-201ENST00000370021 RGS3P49796 1198 aa13.87□□□□□ -0.19
PRPF38B-201ENST00000370021 CFAP43Q8NDM7 1665 aa13.86□□□□□ -0.19
PRPF38B-201ENST00000370021 NUDCQ9Y266 331 aa13.85□□□□□ -0.19
PRPF38B-201ENST00000370021 TIAM1Q13009 1591 aa13.85□□□□□ -0.19
PRPF38B-201ENST00000370021 ZBED9Q6R2W3 1325 aa13.84□□□□□ -0.19
PRPF38B-201ENST00000370021 PDE4AP27815 886 aa13.84□□□□□ -0.19
PRPF38B-201ENST00000370021 CARMIL1Q5VZK9 1371 aa13.83□□□□□ -0.2
PRPF38B-201ENST00000370021 MAPKBP1O60336 1514 aa13.83□□□□□ -0.2
PRPF38B-201ENST00000370021 FHOD3Q2V2M9 1422 aa13.82□□□□□ -0.2
PRPF38B-201ENST00000370021 PPM1GO15355 546 aaPredicted RBP13.81□□□□□ -0.2
PRPF38B-201ENST00000370021 MPHOSPH9Q99550 1183 aa13.81□□□□□ -0.2
PRPF38B-201ENST00000370021 IGF1RP08069 1367 aa13.8□□□□□ -0.2
PRPF38B-201ENST00000370021 RCAN3Q9UKA8 241 aa13.78□□□□□ -0.2
PRPF38B-201ENST00000370021 ARID4BQ4LE39 1312 aaPredicted RBP13.77□□□□□ -0.2
PRPF38B-201ENST00000370021 CC2D1BQ5T0F9 858 aaKnown RBP13.77□□□□□ -0.2
PRPF38B-201ENST00000370021 FGD5Q6ZNL6 1462 aa13.77□□□□□ -0.21
PRPF38B-201ENST00000370021 RGL3Q3MIN7 710 aa13.76□□□□□ -0.21
PRPF38B-201ENST00000370021 KIF7Q2M1P5 1343 aa13.75□□□□□ -0.21
PRPF38B-201ENST00000370021 SPRYD3Q8NCJ5 442 aa13.75□□□□□ -0.21
PRPF38B-201ENST00000370021 CARD11Q9BXL7 1154 aa13.75□□□□□ -0.21
PRPF38B-201ENST00000370021 CCDC18Q5T9S5 1454 aa13.74□□□□□ -0.21
PRPF38B-201ENST00000370021 NBPF8Q3BBV2 869 aa13.74□□□□□ -0.21
PRPF38B-201ENST00000370021 PCF11O94913 1555 aaKnown RBP13.74□□□□□ -0.21
PRPF38B-201ENST00000370021 CADPSQ9ULU8 1353 aa13.74□□□□□ -0.21
PRPF38B-201ENST00000370021 CTTNBP2Q8WZ74 1663 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms