RNA–Protein interactions for RNA: ENST00000369479.1

CMC4-201, Transcript of C-X9-C motif containing 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMC4, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4-201ENST00000369479 CCNB3Q8WWL7 1395 aa20.68■□□□□ 0.9
CMC4-201ENST00000369479 GAPVD1Q14C86 1478 aa20.65■□□□□ 0.9
CMC4-201ENST00000369479 CFAP43Q8NDM7 1665 aa20.64■□□□□ 0.9
CMC4-201ENST00000369479 LRRC9Q6ZRR7 1453 aa20.63■□□□□ 0.89
CMC4-201ENST00000369479 FYCO1Q9BQS8 1478 aa20.63■□□□□ 0.89
CMC4-201ENST00000369479 ZNF316A6NFI3 1004 aaPredicted RBP20.62■□□□□ 0.89
CMC4-201ENST00000369479 CASKIN1Q8WXD9 1431 aa20.61■□□□□ 0.89
CMC4-201ENST00000369479 KIF21AQ7Z4S6 1674 aa20.61■□□□□ 0.89
CMC4-201ENST00000369479 FMN1Q68DA7 1419 aa20.61■□□□□ 0.89
CMC4-201ENST00000369479 DIEXFQ68CQ4 756 aaKnown RBP20.58■□□□□ 0.89
CMC4-201ENST00000369479 TARBP1Q13395 1621 aaKnown RBP20.56■□□□□ 0.88
CMC4-201ENST00000369479 PCF11O94913 1555 aaKnown RBP20.56■□□□□ 0.88
CMC4-201ENST00000369479 DHX57Q6P158 1386 aaKnown RBP20.54■□□□□ 0.88
CMC4-201ENST00000369479 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.54■□□□□ 0.88
CMC4-201ENST00000369479 TDRD9Q8NDG6 1382 aaKnown RBP20.53■□□□□ 0.88
CMC4-201ENST00000369479 MRC2Q9UBG0 1479 aa20.53■□□□□ 0.88
CMC4-201ENST00000369479 SAMD9Q5K651 1589 aa20.52■□□□□ 0.88
CMC4-201ENST00000369479 FHOD3Q2V2M9 1422 aa20.51■□□□□ 0.87
CMC4-201ENST00000369479 THOC2Q8NI27 1593 aaKnown RBP20.49■□□□□ 0.87
CMC4-201ENST00000369479 PBRM1Q86U86 1689 aa20.45■□□□□ 0.86
CMC4-201ENST00000369479 P3H3Q8IVL6 736 aa20.43■□□□□ 0.86
CMC4-201ENST00000369479 DNAJC5BQ9UF47 199 aa20.43■□□□□ 0.86
CMC4-201ENST00000369479 SNAPC4Q5SXM2 1469 aa20.43■□□□□ 0.86
CMC4-201ENST00000369479 PHLDB1Q86UU1 1377 aa20.42■□□□□ 0.86
CMC4-201ENST00000369479 SETD5Q9C0A6 1442 aa20.42■□□□□ 0.86
CMC4-201ENST00000369479 IFT140Q96RY7 1462 aa20.42■□□□□ 0.86
CMC4-201ENST00000369479 GRIN2BQ13224 1484 aa20.41■□□□□ 0.86
CMC4-201ENST00000369479 WDR62O43379 1518 aa20.38■□□□□ 0.85
CMC4-201ENST00000369479 ADAMTS12P58397 1594 aa20.38■□□□□ 0.85
CMC4-201ENST00000369479 ATP1B4Q9UN42 357 aaPredicted RBP20.36■□□□□ 0.85
CMC4-201ENST00000369479 RAB3GAP2Q9H2M9 1393 aa20.35■□□□□ 0.85
CMC4-201ENST00000369479 CCDC18Q5T9S5 1454 aa20.35■□□□□ 0.85
CMC4-201ENST00000369479 IQGAP2Q13576 1575 aa20.33■□□□□ 0.84
CMC4-201ENST00000369479 MTUS2Q5JR59 1369 aa20.33■□□□□ 0.84
CMC4-201ENST00000369479 CENPBP07199 599 aaPredicted RBP20.32■□□□□ 0.84
CMC4-201ENST00000369479 EHBP1L1Q8N3D4 1523 aa20.31■□□□□ 0.84
CMC4-201ENST00000369479 FAM50AQ14320 339 aaKnown RBP20.3■□□□□ 0.84
CMC4-201ENST00000369479 FGD6Q6ZV73 1430 aa20.29■□□□□ 0.84
CMC4-201ENST00000369479 ITGAEP38570 1179 aa20.29■□□□□ 0.84
CMC4-201ENST00000369479 SUPT6HQ7KZ85 1726 aaKnown RBP20.28■□□□□ 0.84
CMC4-201ENST00000369479 TIMELESSQ9UNS1 1208 aa20.28■□□□□ 0.84
CMC4-201ENST00000369479 UGGT2Q9NYU1 1516 aa20.27■□□□□ 0.84
CMC4-201ENST00000369479 HECW1Q76N89 1606 aa20.27■□□□□ 0.83
CMC4-201ENST00000369479 MYOM3Q5VTT5 1437 aa20.23■□□□□ 0.83
CMC4-201ENST00000369479 ACIN1Q9UKV3 1341 aaKnown RBP20.23■□□□□ 0.83
CMC4-201ENST00000369479 KIAA0586Q9BVV6 1533 aa20.22■□□□□ 0.83
CMC4-201ENST00000369479 NCOA2Q15596 1464 aa20.22■□□□□ 0.83
CMC4-201ENST00000369479 LRRIQ1Q96JM4 1722 aa20.22■□□□□ 0.83
CMC4-201ENST00000369479 ARHGEF11O15085 1522 aa20.21■□□□□ 0.83
CMC4-201ENST00000369479 MAPKBP1O60336 1514 aa20.21■□□□□ 0.83
CMC4-201ENST00000369479 MAGI1Q96QZ7 1491 aaPredicted RBP20.17■□□□□ 0.82
CMC4-201ENST00000369479 ERCC6Q03468 1493 aa20.16■□□□□ 0.82
CMC4-201ENST00000369479 HFM1A2PYH4 1435 aa20.15■□□□□ 0.82
CMC4-201ENST00000369479 ZNF608Q9ULD9 1512 aaPredicted RBP20.15■□□□□ 0.82
CMC4-201ENST00000369479 EPRSP07814 1512 aaKnown RBP20.14■□□□□ 0.81
CMC4-201ENST00000369479 TCOF1Q13428 1488 aaKnown RBP20.14■□□□□ 0.81
CMC4-201ENST00000369479 MIA2Q96PC5 1412 aa20.13■□□□□ 0.81
CMC4-201ENST00000369479 EIF4G3O43432 1585 aaKnown RBP20.12■□□□□ 0.81
CMC4-201ENST00000369479 GRIN2AQ12879 1464 aa20.12■□□□□ 0.81
CMC4-201ENST00000369479 PTPN23Q9H3S7 1636 aa20.12■□□□□ 0.81
CMC4-201ENST00000369479 AKNAQ7Z591 1439 aa20.1■□□□□ 0.81
CMC4-201ENST00000369479 KIAA0556O60303 1618 aa20.09■□□□□ 0.81
CMC4-201ENST00000369479 SCAF1Q9H7N4 1312 aaKnown RBP20.09■□□□□ 0.81
CMC4-201ENST00000369479 MIER1Q8N108 512 aa20.08■□□□□ 0.81
CMC4-201ENST00000369479 UACAQ9BZF9 1416 aa20.08■□□□□ 0.8
CMC4-201ENST00000369479 SYNJ2O15056 1496 aa20.06■□□□□ 0.8
CMC4-201ENST00000369479 MAGI3Q5TCQ9 1506 aa20.06■□□□□ 0.8
CMC4-201ENST00000369479 NEUROD1Q13562 356 aa20.05■□□□□ 0.8
CMC4-201ENST00000369479 DISP1Q96F81 1524 aa20.05■□□□□ 0.8
CMC4-201ENST00000369479 CDK11AQ9UQ88 783 aaPredicted RBP20.04■□□□□ 0.8
CMC4-201ENST00000369479 NAIPQ13075 1403 aa20.03■□□□□ 0.8
CMC4-201ENST00000369479 PTPRKQ15262 1439 aa20.02■□□□□ 0.79
CMC4-201ENST00000369479 RAPGEF6Q8TEU7 1601 aa20.01■□□□□ 0.79
CMC4-201ENST00000369479 GCC2Q8IWJ2 1684 aa19.98■□□□□ 0.79
CMC4-201ENST00000369479 CHMP7Q8WUX9 453 aaPredicted RBP19.98■□□□□ 0.79
CMC4-201ENST00000369479 CARMIL2Q6F5E8 1435 aa19.98■□□□□ 0.79
CMC4-201ENST00000369479 NUP160Q12769 1436 aa19.97■□□□□ 0.79
CMC4-201ENST00000369479 CDK13Q14004 1512 aaKnown RBP19.97■□□□□ 0.79
CMC4-201ENST00000369479 PPP1R15AO75807 674 aaPredicted RBP19.95■□□□□ 0.78
CMC4-201ENST00000369479 NUP153P49790 1475 aaKnown RBP19.94■□□□□ 0.78
CMC4-201ENST00000369479 SIN3AQ96ST3 1273 aa19.94■□□□□ 0.78
CMC4-201ENST00000369479 ROCK1Q13464 1354 aa19.94■□□□□ 0.78
CMC4-201ENST00000369479 CEP170Q5SW79 1584 aa19.92■□□□□ 0.78
CMC4-201ENST00000369479 TONSLQ96HA7 1378 aa19.91■□□□□ 0.78
CMC4-201ENST00000369479 TROQ12816 1431 aaPredicted RBP19.89■□□□□ 0.77
CMC4-201ENST00000369479 JPH4Q96JJ6 628 aa19.86■□□□□ 0.77
CMC4-201ENST00000369479 ADCY10Q96PN6 1610 aa19.86■□□□□ 0.77
CMC4-201ENST00000369479 ITSN2Q9NZM3 1697 aa19.85■□□□□ 0.77
CMC4-201ENST00000369479 DNMT1P26358 1616 aaKnown RBP19.85■□□□□ 0.77
CMC4-201ENST00000369479 GTF3C3Q9Y5Q9 886 aa19.84■□□□□ 0.77
CMC4-201ENST00000369479 DAPK1P53355 1430 aa19.84■□□□□ 0.77
CMC4-201ENST00000369479 PELP1Q8IZL8 1130 aaKnown RBP19.8■□□□□ 0.76
CMC4-201ENST00000369479 YTHDC1Q96MU7 727 aaKnown RBP19.8■□□□□ 0.76
CMC4-201ENST00000369479 RRP7BPQ9NSQ0 103 aa19.8■□□□□ 0.76
CMC4-201ENST00000369479 ABCC5O15440 1437 aa19.78■□□□□ 0.76
CMC4-201ENST00000369479 ABCA8O94911 1581 aa19.78■□□□□ 0.76
CMC4-201ENST00000369479 FBLN2P98095 1184 aa19.76■□□□□ 0.75
CMC4-201ENST00000369479 PLB1Q6P1J6 1458 aa19.75■□□□□ 0.75
CMC4-201ENST00000369479 TRIM52Q96A61 297 aa19.75■□□□□ 0.75
CMC4-201ENST00000369479 CHIC2Q9UKJ5 165 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms