RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 BICRAQ9NZM4 1560 aa26.25■■□□□ 1.79
PRDM1-202ENST00000369091 SIN3AQ96ST3 1273 aa26.23■■□□□ 1.79
PRDM1-202ENST00000369091 RAB3GAP2Q9H2M9 1393 aa26.23■■□□□ 1.79
PRDM1-202ENST00000369091 ARAP1Q96P48 1450 aa26.22■■□□□ 1.79
PRDM1-202ENST00000369091 NBR1Q14596 966 aa26.22■■□□□ 1.79
PRDM1-202ENST00000369091 CCNB3Q8WWL7 1395 aa26.2■■□□□ 1.79
PRDM1-202ENST00000369091 SALL2Q9Y467 1007 aaPredicted RBP26.14■■□□□ 1.78
PRDM1-202ENST00000369091 HNRNPUQ00839 825 aaKnown RBP eCLIP26.12■■□□□ 1.77
PRDM1-202ENST00000369091 PAK3O75914 559 aaPredicted RBP26.09■■□□□ 1.77
PRDM1-202ENST00000369091 NOP58Q9Y2X3 529 aaKnown RBP26.07■■□□□ 1.76
PRDM1-202ENST00000369091 CCDC136Q96JN2 1154 aa26.02■■□□□ 1.76
PRDM1-202ENST00000369091 PPP4R2Q9NY27 417 aa26.01■■□□□ 1.76
PRDM1-202ENST00000369091 B4GALNT3Q6L9W6 998 aa26.01■■□□□ 1.75
PRDM1-202ENST00000369091 SETD5Q9C0A6 1442 aa25.97■■□□□ 1.75
PRDM1-202ENST00000369091 IL27Q8NEV9 243 aa25.94■■□□□ 1.74
PRDM1-202ENST00000369091 RTN4Q9NQC3 1192 aaKnown RBP25.92■■□□□ 1.74
PRDM1-202ENST00000369091 ERICH6BQ5W0A0 696 aa25.91■■□□□ 1.74
PRDM1-202ENST00000369091 PRXQ9BXM0 1461 aa25.84■■□□□ 1.73
PRDM1-202ENST00000369091 ERICH3Q5RHP9 1530 aa25.84■■□□□ 1.73
PRDM1-202ENST00000369091 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.83■■□□□ 1.73
PRDM1-202ENST00000369091 DNAJC5BQ9UF47 199 aa25.82■■□□□ 1.72
PRDM1-202ENST00000369091 RTL5Q5HYW3 569 aaPredicted RBP25.81■■□□□ 1.72
PRDM1-202ENST00000369091 FAM50AQ14320 339 aaKnown RBP25.8■■□□□ 1.72
PRDM1-202ENST00000369091 TIMELESSQ9UNS1 1208 aa25.8■■□□□ 1.72
PRDM1-202ENST00000369091 ARHGAP35Q9NRY4 1499 aa25.76■■□□□ 1.71
PRDM1-202ENST00000369091 CCDC184Q52MB2 194 aa25.75■■□□□ 1.71
PRDM1-202ENST00000369091 PHLDB1Q86UU1 1377 aa25.72■■□□□ 1.71
PRDM1-202ENST00000369091 IPO9Q96P70 1041 aaKnown RBP25.71■■□□□ 1.71
PRDM1-202ENST00000369091 TONSLQ96HA7 1378 aa25.7■■□□□ 1.7
PRDM1-202ENST00000369091 TOP2BQ02880 1626 aa25.7■■□□□ 1.7
PRDM1-202ENST00000369091 ANP32AP39687 249 aaKnown RBP25.68■■□□□ 1.7
PRDM1-202ENST00000369091 ZBTB47Q9UFB7 747 aaPredicted RBP25.67■■□□□ 1.7
PRDM1-202ENST00000369091 FAM9BQ8IZU0 186 aa25.65■■□□□ 1.7
PRDM1-202ENST00000369091 TIAM1Q13009 1591 aa25.64■■□□□ 1.69
PRDM1-202ENST00000369091 WASHC2AQ641Q2 1341 aa25.59■■□□□ 1.69
PRDM1-202ENST00000369091 LRRC9Q6ZRR7 1453 aa25.57■■□□□ 1.68
PRDM1-202ENST00000369091 UBE2Q2Q8WVN8 375 aa25.55■■□□□ 1.68
PRDM1-202ENST00000369091 ZBED9Q6R2W3 1325 aa25.53■■□□□ 1.68
PRDM1-202ENST00000369091 BIVM-ERCC5R4GMW8 1640 aa25.52■■□□□ 1.68
PRDM1-202ENST00000369091 LAS1LQ9Y4W2 734 aaKnown RBP25.51■■□□□ 1.68
PRDM1-202ENST00000369091 AKNAQ7Z591 1439 aa25.5■■□□□ 1.67
PRDM1-202ENST00000369091 HSPA5P11021 654 aaKnown RBP25.5■■□□□ 1.67
PRDM1-202ENST00000369091 MRS2Q9HD23 443 aa25.5■■□□□ 1.67
PRDM1-202ENST00000369091 FHAD1B1AJZ9 1412 aa25.5■■□□□ 1.67
PRDM1-202ENST00000369091 PEG3Q9GZU2 1588 aa25.49■■□□□ 1.67
PRDM1-202ENST00000369091 NPM2Q86SE8 214 aaKnown RBP25.48■■□□□ 1.67
PRDM1-202ENST00000369091 NEFMP07197 916 aa25.46■■□□□ 1.67
PRDM1-202ENST00000369091 MAP3K1Q13233 1512 aa25.45■■□□□ 1.67
PRDM1-202ENST00000369091 KDM5BQ9UGL1 1544 aa25.43■■□□□ 1.66
PRDM1-202ENST00000369091 KIF27Q86VH2 1401 aa25.43■■□□□ 1.66
PRDM1-202ENST00000369091 CNTLNQ9NXG0 1405 aa25.43■■□□□ 1.66
PRDM1-202ENST00000369091 PRKRIP1Q9H875 184 aaPredicted RBP25.43■■□□□ 1.66
PRDM1-202ENST00000369091 ATP1B4Q9UN42 357 aaPredicted RBP25.4■■□□□ 1.66
PRDM1-202ENST00000369091 BRPF3Q9ULD4 1205 aa25.4■■□□□ 1.66
PRDM1-202ENST00000369091 CCDC18Q5T9S5 1454 aa25.38■■□□□ 1.65
PRDM1-202ENST00000369091 CC2D2AQ9P2K1 1620 aa25.38■■□□□ 1.65
PRDM1-202ENST00000369091 NCAPD3P42695 1498 aa25.38■■□□□ 1.65
PRDM1-202ENST00000369091 NCOA2Q15596 1464 aa25.38■■□□□ 1.65
PRDM1-202ENST00000369091 SENP3-EIF4A1A0A087X0R7 540 aa25.37■■□□□ 1.65
PRDM1-202ENST00000369091 C11orf95C9JLR9 678 aaPredicted RBP25.36■■□□□ 1.65
PRDM1-202ENST00000369091 WASHC2CQ9Y4E1 1318 aa25.35■■□□□ 1.65
PRDM1-202ENST00000369091 ATAD2BQ9ULI0 1458 aa25.34■■□□□ 1.65
PRDM1-202ENST00000369091 EIF5BO60841 1220 aaKnown RBP25.33■■□□□ 1.65
PRDM1-202ENST00000369091 CUX1P39880 1505 aa25.32■■□□□ 1.64
PRDM1-202ENST00000369091 P3H3Q8IVL6 736 aa25.32■■□□□ 1.64
PRDM1-202ENST00000369091 SMG6Q86US8 1419 aaKnown RBP25.31■■□□□ 1.64
PRDM1-202ENST00000369091 UACAQ9BZF9 1416 aa25.31■■□□□ 1.64
PRDM1-202ENST00000369091 AQRO60306 1485 aaKnown RBP eCLIP25.3■■□□□ 1.64
PRDM1-202ENST00000369091 EIF4G2P78344 907 aaKnown RBP eCLIP25.29■■□□□ 1.64
PRDM1-202ENST00000369091 CFAP43Q8NDM7 1665 aa25.28■■□□□ 1.64
PRDM1-202ENST00000369091 NUDCQ9Y266 331 aa25.28■■□□□ 1.64
PRDM1-202ENST00000369091 PCF11O94913 1555 aaKnown RBP25.27■■□□□ 1.64
PRDM1-202ENST00000369091 CNGB1Q14028 1251 aaPredicted RBP25.27■■□□□ 1.64
PRDM1-202ENST00000369091 USP35Q9P2H5 1018 aa25.27■■□□□ 1.64
PRDM1-202ENST00000369091 RNF123Q5XPI4 1314 aa25.26■■□□□ 1.63
PRDM1-202ENST00000369091 PTPRKQ15262 1439 aa25.25■■□□□ 1.63
PRDM1-202ENST00000369091 CCDC7Q96M83 1385 aa25.24■■□□□ 1.63
PRDM1-202ENST00000369091 PTPN23Q9H3S7 1636 aa25.21■■□□□ 1.63
PRDM1-202ENST00000369091 HFM1A2PYH4 1435 aa25.19■■□□□ 1.62
PRDM1-202ENST00000369091 NCOA1Q15788 1441 aa25.19■■□□□ 1.62
PRDM1-202ENST00000369091 PDE4AP27815 886 aa25.17■■□□□ 1.62
PRDM1-202ENST00000369091 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.17■■□□□ 1.62
PRDM1-202ENST00000369091 PPM1GO15355 546 aaPredicted RBP25.16■■□□□ 1.62
PRDM1-202ENST00000369091 FGD6Q6ZV73 1430 aa25.16■■□□□ 1.62
PRDM1-202ENST00000369091 GSE1Q14687 1217 aa25.14■■□□□ 1.61
PRDM1-202ENST00000369091 NAIPQ13075 1403 aa25.13■■□□□ 1.61
PRDM1-202ENST00000369091 IGF1RP08069 1367 aa25.12■■□□□ 1.61
PRDM1-202ENST00000369091 BACH2Q9BYV9 841 aa25.1■■□□□ 1.61
PRDM1-202ENST00000369091 KIF7Q2M1P5 1343 aa25.09■■□□□ 1.61
PRDM1-202ENST00000369091 FHOD3Q2V2M9 1422 aa25.09■■□□□ 1.61
PRDM1-202ENST00000369091 TCERG1O14776 1098 aaKnown RBP25.09■■□□□ 1.61
PRDM1-202ENST00000369091 EXOC6Q8TAG9 804 aa25.09■■□□□ 1.61
PRDM1-202ENST00000369091 FRAT1Q92837 279 aaPredicted RBP25.08■■□□□ 1.61
PRDM1-202ENST00000369091 L3MBTL2Q969R5 705 aa25.06■■□□□ 1.6
PRDM1-202ENST00000369091 CARMIL1Q5VZK9 1371 aa25.04■■□□□ 1.6
PRDM1-202ENST00000369091 NFKBIBQ15653 356 aa25.04■■□□□ 1.6
PRDM1-202ENST00000369091 FMN1Q68DA7 1419 aa25.04■■□□□ 1.6
PRDM1-202ENST00000369091 DENND4BO75064 1496 aaPredicted RBP25.03■■□□□ 1.6
PRDM1-202ENST00000369091 SKAP1Q86WV1 359 aa25.02■■□□□ 1.6
PRDM1-202ENST00000369091 SLC4A3P48751 1232 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms