RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 P3H3Q8IVL6 736 aa37.79■■■■□ 3.64
CLK2-203ENST00000368361 EFCAB5A4FU69 1503 aa37.79■■■■□ 3.64
CLK2-203ENST00000368361 AQRO60306 1485 aaKnown RBP eCLIP37.78■■■■□ 3.645e-7■■■■■ 28
CLK2-203ENST00000368361 HNRNPUL2Q1KMD3 747 aaKnown RBP37.77■■■■□ 3.64
CLK2-203ENST00000368361 FHAD1B1AJZ9 1412 aa37.75■■■■□ 3.63
CLK2-203ENST00000368361 FHOD3Q2V2M9 1422 aa37.74■■■■□ 3.63
CLK2-203ENST00000368361 ERCC6Q03468 1493 aa37.73■■■■□ 3.63
CLK2-203ENST00000368361 TIAM1Q13009 1591 aa37.71■■■■□ 3.63
CLK2-203ENST00000368361 IFT140Q96RY7 1462 aa37.71■■■■□ 3.63
CLK2-203ENST00000368361 MAP3K1Q13233 1512 aa37.7■■■■□ 3.63
CLK2-203ENST00000368361 PCF11O94913 1555 aaKnown RBP37.69■■■■□ 3.62
CLK2-203ENST00000368361 ZNF608Q9ULD9 1512 aaPredicted RBP37.65■■■■□ 3.62
CLK2-203ENST00000368361 ADAMTS12P58397 1594 aa37.63■■■■□ 3.61
CLK2-203ENST00000368361 GRIN2BQ13224 1484 aa37.62■■■■□ 3.61
CLK2-203ENST00000368361 THOC2Q8NI27 1593 aaKnown RBP37.6■■■■□ 3.61
CLK2-203ENST00000368361 RRBP1Q9P2E9 1410 aaKnown RBP37.59■■■■□ 3.61
CLK2-203ENST00000368361 SAMD9Q5K651 1589 aa37.58■■■■□ 3.61
CLK2-203ENST00000368361 CFAP43Q8NDM7 1665 aa37.55■■■■□ 3.6
CLK2-203ENST00000368361 LRRC9Q6ZRR7 1453 aa37.54■■■■□ 3.6
CLK2-203ENST00000368361 FYCO1Q9BQS8 1478 aa37.54■■■■□ 3.6
CLK2-203ENST00000368361 CASKIN1Q8WXD9 1431 aa37.52■■■■□ 3.6
CLK2-203ENST00000368361 FMN1Q68DA7 1419 aa37.5■■■■□ 3.59
CLK2-203ENST00000368361 ATP1B4Q9UN42 357 aaPredicted RBP37.5■■■■□ 3.59
CLK2-203ENST00000368361 EIF4G3O43432 1585 aaKnown RBP37.46■■■■□ 3.59
CLK2-203ENST00000368361 CCNB3Q8WWL7 1395 aa37.44■■■■□ 3.58
CLK2-203ENST00000368361 SNAPC4Q5SXM2 1469 aa37.43■■■■□ 3.58
CLK2-203ENST00000368361 IQGAP2Q13576 1575 aa37.39■■■■□ 3.58
CLK2-203ENST00000368361 PHLDB1Q86UU1 1377 aa37.32■■■■□ 3.56
CLK2-203ENST00000368361 LRRIQ1Q96JM4 1722 aa37.26■■■■□ 3.55
CLK2-203ENST00000368361 GRIN2AQ12879 1464 aa37.22■■■■□ 3.55
CLK2-203ENST00000368361 MAGI1Q96QZ7 1491 aaPredicted RBP37.19■■■■□ 3.54
CLK2-203ENST00000368361 UGGT2Q9NYU1 1516 aa37.17■■■■□ 3.54
CLK2-203ENST00000368361 ITGAEP38570 1179 aa37.17■■■■□ 3.54
CLK2-203ENST00000368361 KIAA0586Q9BVV6 1533 aa37.16■■■■□ 3.54
CLK2-203ENST00000368361 MTUS2Q5JR59 1369 aa37.09■■■■□ 3.53
CLK2-203ENST00000368361 SYNJ2O15056 1496 aa37.09■■■■□ 3.53
CLK2-203ENST00000368361 DHX57Q6P158 1386 aaKnown RBP37.05■■■■□ 3.52
CLK2-203ENST00000368361 CHMP7Q8WUX9 453 aaPredicted RBP37.05■■■■□ 3.52
CLK2-203ENST00000368361 FAM50AQ14320 339 aaKnown RBP37.04■■■■□ 3.52
CLK2-203ENST00000368361 HECW1Q76N89 1606 aa37.03■■■■□ 3.52
CLK2-203ENST00000368361 DISP1Q96F81 1524 aa37.01■■■■□ 3.52
CLK2-203ENST00000368361 KIAA0556O60303 1618 aa37.01■■■■□ 3.52
CLK2-203ENST00000368361 CCDC18Q5T9S5 1454 aa37■■■■□ 3.51
CLK2-203ENST00000368361 CEP170Q5SW79 1584 aa37■■■■□ 3.51
CLK2-203ENST00000368361 EHBP1L1Q8N3D4 1523 aa36.97■■■■□ 3.51
CLK2-203ENST00000368361 FBLN2P98095 1184 aa36.96■■■■□ 3.51
CLK2-203ENST00000368361 MAGI3Q5TCQ9 1506 aa36.93■■■■□ 3.5
CLK2-203ENST00000368361 FGD6Q6ZV73 1430 aa36.93■■■■□ 3.5
CLK2-203ENST00000368361 NCOA2Q15596 1464 aa36.93■■■■□ 3.5
CLK2-203ENST00000368361 EPRSP07814 1512 aaKnown RBP36.92■■■■□ 3.5
CLK2-203ENST00000368361 SUPT6HQ7KZ85 1726 aaKnown RBP36.92■■■■□ 3.5
CLK2-203ENST00000368361 CLSPNQ9HAW4 1339 aa36.92■■■■□ 3.5
CLK2-203ENST00000368361 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.91■■■■□ 3.52e-7■□□□□ 8.8
CLK2-203ENST00000368361 RAB3GAP2Q9H2M9 1393 aa36.9■■■■□ 3.5
CLK2-203ENST00000368361 NUP160Q12769 1436 aa36.87■■■■□ 3.49
CLK2-203ENST00000368361 CDK13Q14004 1512 aaKnown RBP36.86■■■■□ 3.49
CLK2-203ENST00000368361 SETD5Q9C0A6 1442 aa36.84■■■■□ 3.49
CLK2-203ENST00000368361 MYOM3Q5VTT5 1437 aa36.82■■■■□ 3.48
CLK2-203ENST00000368361 ARHGEF11O15085 1522 aa36.81■■■■□ 3.48
CLK2-203ENST00000368361 ARID3CA6NKF2 412 aa36.77■■■■□ 3.48
CLK2-203ENST00000368361 RAPGEF6Q8TEU7 1601 aa36.75■■■■□ 3.47
CLK2-203ENST00000368361 NUP153P49790 1475 aaKnown RBP36.72■■■■□ 3.47
CLK2-203ENST00000368361 JPH4Q96JJ6 628 aa36.71■■■■□ 3.47
CLK2-203ENST00000368361 PTPN23Q9H3S7 1636 aa36.67■■■■□ 3.46
CLK2-203ENST00000368361 CARMIL2Q6F5E8 1435 aa36.66■■■■□ 3.46
CLK2-203ENST00000368361 PTPRKQ15262 1439 aa36.63■■■■□ 3.45
CLK2-203ENST00000368361 ZNF316A6NFI3 1004 aaPredicted RBP36.63■■■■□ 3.45
CLK2-203ENST00000368361 MAPKBP1O60336 1514 aa36.61■■■■□ 3.45
CLK2-203ENST00000368361 PLB1Q6P1J6 1458 aa36.59■■■■□ 3.45
CLK2-203ENST00000368361 TCOF1Q13428 1488 aaKnown RBP36.55■■■■□ 3.44
CLK2-203ENST00000368361 DIEXFQ68CQ4 756 aaKnown RBP36.54■■■■□ 3.44
CLK2-203ENST00000368361 CHD1O14646 1710 aa36.52■■■■□ 3.44
CLK2-203ENST00000368361 HFM1A2PYH4 1435 aa36.5■■■■□ 3.43
CLK2-203ENST00000368361 MIA2Q96PC5 1412 aa36.49■■■■□ 3.43
CLK2-203ENST00000368361 CDK11AQ9UQ88 783 aaPredicted RBP36.47■■■■□ 3.43
CLK2-203ENST00000368361 NAIPQ13075 1403 aa36.41■■■■□ 3.42
CLK2-203ENST00000368361 PRG4Q92954 1404 aaPredicted RBP36.4■■■■□ 3.42
CLK2-203ENST00000368361 ABCA8O94911 1581 aa36.39■■■■□ 3.42
CLK2-203ENST00000368361 TROQ12816 1431 aaPredicted RBP36.38■■■■□ 3.42
CLK2-203ENST00000368361 CHIC2Q9UKJ5 165 aa36.3■■■■□ 3.4
CLK2-203ENST00000368361 ADCY10Q96PN6 1610 aa36.28■■■■□ 3.4
CLK2-203ENST00000368361 UACAQ9BZF9 1416 aa36.27■■■■□ 3.4
CLK2-203ENST00000368361 KIF14Q15058 1648 aa36.27■■■■□ 3.4
CLK2-203ENST00000368361 SIN3AQ96ST3 1273 aa36.26■■■■□ 3.4
CLK2-203ENST00000368361 RRP7BPQ9NSQ0 103 aa36.26■■■■□ 3.4
CLK2-203ENST00000368361 GCC2Q8IWJ2 1684 aa36.26■■■■□ 3.39
CLK2-203ENST00000368361 SHROOM2Q13796 1616 aa36.24■■■■□ 3.39
CLK2-203ENST00000368361 PTPRGP23470 1445 aa36.24■■■■□ 3.39
CLK2-203ENST00000368361 ATP10BO94823 1461 aa36.24■■■■□ 3.39
CLK2-203ENST00000368361 AKNAQ7Z591 1439 aa36.23■■■■□ 3.39
CLK2-203ENST00000368361 ZNF644Q9H582 1327 aaPredicted RBP36.21■■■■□ 3.39
CLK2-203ENST00000368361 NEUROD1Q13562 356 aa36.2■■■■□ 3.39
CLK2-203ENST00000368361 ITSN2Q9NZM3 1697 aa36.19■■■■□ 3.38
CLK2-203ENST00000368361 DAPK1P53355 1430 aa36.19■■■■□ 3.38
CLK2-203ENST00000368361 DNMT1P26358 1616 aaKnown RBP36.19■■■■□ 3.38
CLK2-203ENST00000368361 GPATCH8Q9UKJ3 1502 aaKnown RBP36.17■■■■□ 3.38
CLK2-203ENST00000368361 PLEKHD1A6NEE1 506 aa36.15■■■■□ 3.38
CLK2-203ENST00000368361 ABCC5O15440 1437 aa36.14■■■■□ 3.38
CLK2-203ENST00000368361 KDM6BO15054 1643 aa36.12■■■■□ 3.37
CLK2-203ENST00000368361 CFDP1Q9UEE9 299 aaPredicted RBP36.12■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms