RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 WDR62O43379 1518 aa26.46■■□□□ 1.83
LMNA-205ENST00000368299 KANK4Q5T7N3 995 aaPredicted RBP26.44■■□□□ 1.82
LMNA-205ENST00000368299 IFT140Q96RY7 1462 aa26.4■■□□□ 1.82
LMNA-205ENST00000368299 PBRM1Q86U86 1689 aa26.38■■□□□ 1.81
LMNA-205ENST00000368299 TIAM1Q13009 1591 aa26.38■■□□□ 1.81
LMNA-205ENST00000368299 HNRNPUL2Q1KMD3 747 aaKnown RBP26.34■■□□□ 1.81
LMNA-205ENST00000368299 AQRO60306 1485 aaKnown RBP eCLIP26.34■■□□□ 1.811e-7■■■■■ 36.5
LMNA-205ENST00000368299 RRBP1Q9P2E9 1410 aaKnown RBP26.34■■□□□ 1.81
LMNA-205ENST00000368299 ERCC6Q03468 1493 aa26.33■■□□□ 1.81
LMNA-205ENST00000368299 GRIN2BQ13224 1484 aa26.33■■□□□ 1.81
LMNA-205ENST00000368299 FHOD3Q2V2M9 1422 aa26.33■■□□□ 1.8
LMNA-205ENST00000368299 FYCO1Q9BQS8 1478 aa26.31■■□□□ 1.8
LMNA-205ENST00000368299 PCF11O94913 1555 aaKnown RBP26.3■■□□□ 1.8
LMNA-205ENST00000368299 FMN1Q68DA7 1419 aa26.3■■□□□ 1.8
LMNA-205ENST00000368299 P3H3Q8IVL6 736 aa26.3■■□□□ 1.8
LMNA-205ENST00000368299 ADAMTS12P58397 1594 aa26.29■■□□□ 1.8
LMNA-205ENST00000368299 SAMD9Q5K651 1589 aa26.29■■□□□ 1.8
LMNA-205ENST00000368299 CASKIN1Q8WXD9 1431 aa26.29■■□□□ 1.8
LMNA-205ENST00000368299 LRRC9Q6ZRR7 1453 aa26.27■■□□□ 1.8
LMNA-205ENST00000368299 CFAP43Q8NDM7 1665 aa26.27■■□□□ 1.8
LMNA-205ENST00000368299 THOC2Q8NI27 1593 aaKnown RBP26.22■■□□□ 1.79
LMNA-205ENST00000368299 CCNB3Q8WWL7 1395 aa26.22■■□□□ 1.79
LMNA-205ENST00000368299 ZNF608Q9ULD9 1512 aaPredicted RBP26.21■■□□□ 1.79
LMNA-205ENST00000368299 SNAPC4Q5SXM2 1469 aa26.16■■□□□ 1.78
LMNA-205ENST00000368299 IQGAP2Q13576 1575 aa26.15■■□□□ 1.78
LMNA-205ENST00000368299 EIF4G3O43432 1585 aaKnown RBP26.13■■□□□ 1.77
LMNA-205ENST00000368299 ATP1B4Q9UN42 357 aaPredicted RBP26.13■■□□□ 1.77
LMNA-205ENST00000368299 PHLDB1Q86UU1 1377 aa26.05■■□□□ 1.76
LMNA-205ENST00000368299 MAGI1Q96QZ7 1491 aaPredicted RBP26.04■■□□□ 1.76
LMNA-205ENST00000368299 UGGT2Q9NYU1 1516 aa26.03■■□□□ 1.76
LMNA-205ENST00000368299 KIAA0586Q9BVV6 1533 aa26.02■■□□□ 1.76
LMNA-205ENST00000368299 GRIN2AQ12879 1464 aa26.01■■□□□ 1.76
LMNA-205ENST00000368299 CLSPNQ9HAW4 1339 aa26■■□□□ 1.75
LMNA-205ENST00000368299 MTUS2Q5JR59 1369 aa25.96■■□□□ 1.75
LMNA-205ENST00000368299 CCDC18Q5T9S5 1454 aa25.96■■□□□ 1.75
LMNA-205ENST00000368299 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.95■■□□□ 1.75
LMNA-205ENST00000368299 SYNJ2O15056 1496 aa25.94■■□□□ 1.74
LMNA-205ENST00000368299 LRRIQ1Q96JM4 1722 aa25.93■■□□□ 1.74
LMNA-205ENST00000368299 HECW1Q76N89 1606 aa25.93■■□□□ 1.74
LMNA-205ENST00000368299 DHX57Q6P158 1386 aaKnown RBP25.91■■□□□ 1.74
LMNA-205ENST00000368299 EHBP1L1Q8N3D4 1523 aa25.9■■□□□ 1.74
LMNA-205ENST00000368299 ITGAEP38570 1179 aa25.88■■□□□ 1.73
LMNA-205ENST00000368299 CHMP7Q8WUX9 453 aaPredicted RBP25.88■■□□□ 1.73
LMNA-205ENST00000368299 FAM50AQ14320 339 aaKnown RBP25.86■■□□□ 1.73
LMNA-205ENST00000368299 KIAA0556O60303 1618 aa25.86■■□□□ 1.73
LMNA-205ENST00000368299 DISP1Q96F81 1524 aa25.85■■□□□ 1.73
LMNA-205ENST00000368299 FGD6Q6ZV73 1430 aa25.84■■□□□ 1.73
LMNA-205ENST00000368299 SUPT6HQ7KZ85 1726 aaKnown RBP25.84■■□□□ 1.73
LMNA-205ENST00000368299 NCOA2Q15596 1464 aa25.82■■□□□ 1.72
LMNA-205ENST00000368299 EPRSP07814 1512 aaKnown RBP25.82■■□□□ 1.72
LMNA-205ENST00000368299 SETD5Q9C0A6 1442 aa25.81■■□□□ 1.72
LMNA-205ENST00000368299 CEP170Q5SW79 1584 aa25.8■■□□□ 1.72
LMNA-205ENST00000368299 RAB3GAP2Q9H2M9 1393 aa25.8■■□□□ 1.72
LMNA-205ENST00000368299 NUP160Q12769 1436 aa25.79■■□□□ 1.72
LMNA-205ENST00000368299 MYOM3Q5VTT5 1437 aa25.78■■□□□ 1.72
LMNA-205ENST00000368299 ARHGEF11O15085 1522 aa25.77■■□□□ 1.72
LMNA-205ENST00000368299 MAGI3Q5TCQ9 1506 aa25.74■■□□□ 1.71
LMNA-205ENST00000368299 FBLN2P98095 1184 aa25.73■■□□□ 1.71
LMNA-205ENST00000368299 CARMIL2Q6F5E8 1435 aa25.69■■□□□ 1.7
LMNA-205ENST00000368299 CDK13Q14004 1512 aaKnown RBP25.69■■□□□ 1.7
LMNA-205ENST00000368299 RAPGEF6Q8TEU7 1601 aa25.68■■□□□ 1.7
LMNA-205ENST00000368299 ZNF316A6NFI3 1004 aaPredicted RBP25.68■■□□□ 1.7
LMNA-205ENST00000368299 NUP153P49790 1475 aaKnown RBP25.65■■□□□ 1.7
LMNA-205ENST00000368299 JPH4Q96JJ6 628 aa25.65■■□□□ 1.7
LMNA-205ENST00000368299 PTPN23Q9H3S7 1636 aa25.63■■□□□ 1.69
LMNA-205ENST00000368299 TCOF1Q13428 1488 aaKnown RBP25.61■■□□□ 1.69
LMNA-205ENST00000368299 MIA2Q96PC5 1412 aa25.61■■□□□ 1.69
LMNA-205ENST00000368299 CDK11AQ9UQ88 783 aaPredicted RBP25.6■■□□□ 1.69
LMNA-205ENST00000368299 DIEXFQ68CQ4 756 aaKnown RBP25.6■■□□□ 1.69
LMNA-205ENST00000368299 HFM1A2PYH4 1435 aa25.58■■□□□ 1.69
LMNA-205ENST00000368299 MAPKBP1O60336 1514 aa25.57■■□□□ 1.68
LMNA-205ENST00000368299 PTPRKQ15262 1439 aa25.54■■□□□ 1.68
LMNA-205ENST00000368299 ARID3CA6NKF2 412 aa25.52■■□□□ 1.68
LMNA-205ENST00000368299 PLB1Q6P1J6 1458 aa25.51■■□□□ 1.67
LMNA-205ENST00000368299 TROQ12816 1431 aaPredicted RBP25.47■■□□□ 1.67
LMNA-205ENST00000368299 NAIPQ13075 1403 aa25.47■■□□□ 1.67
LMNA-205ENST00000368299 AKNAQ7Z591 1439 aa25.45■■□□□ 1.67
LMNA-205ENST00000368299 ABCA8O94911 1581 aa25.44■■□□□ 1.66
LMNA-205ENST00000368299 CHD1O14646 1710 aa25.43■■□□□ 1.66
LMNA-205ENST00000368299 UACAQ9BZF9 1416 aa25.42■■□□□ 1.66
LMNA-205ENST00000368299 PRG4Q92954 1404 aaPredicted RBP25.41■■□□□ 1.66
LMNA-205ENST00000368299 SCAF1Q9H7N4 1312 aaKnown RBP25.41■■□□□ 1.66
LMNA-205ENST00000368299 TIMELESSQ9UNS1 1208 aa25.4■■□□□ 1.66
LMNA-205ENST00000368299 ADCY10Q96PN6 1610 aa25.39■■□□□ 1.66
LMNA-205ENST00000368299 GCC2Q8IWJ2 1684 aa25.37■■□□□ 1.65
LMNA-205ENST00000368299 ITSN2Q9NZM3 1697 aa25.34■■□□□ 1.65
LMNA-205ENST00000368299 PTPRGP23470 1445 aa25.34■■□□□ 1.65
LMNA-205ENST00000368299 SHROOM2Q13796 1616 aa25.34■■□□□ 1.65
LMNA-205ENST00000368299 ACIN1Q9UKV3 1341 aaKnown RBP25.33■■□□□ 1.65
LMNA-205ENST00000368299 DNMT1P26358 1616 aaKnown RBP25.32■■□□□ 1.64
LMNA-205ENST00000368299 ROCK1Q13464 1354 aa25.31■■□□□ 1.64
LMNA-205ENST00000368299 DAPK1P53355 1430 aa25.31■■□□□ 1.64
LMNA-205ENST00000368299 ATP10BO94823 1461 aa25.31■■□□□ 1.64
LMNA-205ENST00000368299 PLEKHD1A6NEE1 506 aa25.31■■□□□ 1.64
LMNA-205ENST00000368299 CHIC2Q9UKJ5 165 aa25.29■■□□□ 1.64
LMNA-205ENST00000368299 RRP7BPQ9NSQ0 103 aa25.29■■□□□ 1.64
LMNA-205ENST00000368299 GPATCH8Q9UKJ3 1502 aaKnown RBP25.28■■□□□ 1.64
LMNA-205ENST00000368299 SIN3AQ96ST3 1273 aa25.28■■□□□ 1.64
LMNA-205ENST00000368299 KIF14Q15058 1648 aa25.28■■□□□ 1.64
LMNA-205ENST00000368299 ABCC5O15440 1437 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms