RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 CYB5RLQ6IPT4 315 aa37.85■■■■□ 3.65
ECHDC1-203ENST00000368291 RAPGEF2Q9Y4G8 1499 aa37.84■■■■□ 3.65
ECHDC1-203ENST00000368291 KIAA0586Q9BVV6 1533 aa37.83■■■■□ 3.65
ECHDC1-203ENST00000368291 JPH4Q96JJ6 628 aa37.79■■■■□ 3.64
ECHDC1-203ENST00000368291 PRXQ9BXM0 1461 aa37.74■■■■□ 3.63
ECHDC1-203ENST00000368291 PRG4Q92954 1404 aaPredicted RBP37.72■■■■□ 3.63
ECHDC1-203ENST00000368291 EEA1Q15075 1411 aa37.68■■■■□ 3.62
ECHDC1-203ENST00000368291 CSRNP3Q8WYN3 585 aa37.65■■■■□ 3.62
ECHDC1-203ENST00000368291 IQGAP2Q13576 1575 aa37.64■■■■□ 3.62
ECHDC1-203ENST00000368291 CTTNBP2Q8WZ74 1663 aa37.58■■■■□ 3.61
ECHDC1-203ENST00000368291 FAM9AQ8IZU1 332 aaPredicted RBP37.52■■■■□ 3.6
ECHDC1-203ENST00000368291 UGGT2Q9NYU1 1516 aa37.45■■■■□ 3.58
ECHDC1-203ENST00000368291 DISP1Q96F81 1524 aa37.4■■■■□ 3.58
ECHDC1-203ENST00000368291 KIF21BO75037 1637 aa37.37■■■■□ 3.57
ECHDC1-203ENST00000368291 CARMIL2Q6F5E8 1435 aa37.37■■■■□ 3.57
ECHDC1-203ENST00000368291 KIAA0556O60303 1618 aa37.29■■■■□ 3.56
ECHDC1-203ENST00000368291 TNIKQ9UKE5 1360 aa37.27■■■■□ 3.56
ECHDC1-203ENST00000368291 PTPRGP23470 1445 aa37.25■■■■□ 3.55
ECHDC1-203ENST00000368291 ADCY10Q96PN6 1610 aa37.23■■■■□ 3.55
ECHDC1-203ENST00000368291 GOLGA3Q08378 1498 aa37.16■■■■□ 3.54
ECHDC1-203ENST00000368291 TTBK1Q5TCY1 1321 aaPredicted RBP37.15■■■■□ 3.54
ECHDC1-203ENST00000368291 SAMD9Q5K651 1589 aa37.07■■■■□ 3.52
ECHDC1-203ENST00000368291 TRHP20396 242 aaPredicted RBP37.04■■■■□ 3.52
ECHDC1-203ENST00000368291 EHMT2Q96KQ7 1210 aa37.04■■■■□ 3.52
ECHDC1-203ENST00000368291 UACAQ9BZF9 1416 aa37.01■■■■□ 3.52
ECHDC1-203ENST00000368291 UHRF1BP1LA0JNW5 1464 aa37.01■■■■□ 3.51
ECHDC1-203ENST00000368291 ABCC2Q92887 1545 aa36.97■■■■□ 3.51
ECHDC1-203ENST00000368291 MAPKBP1O60336 1514 aa36.95■■■■□ 3.51
ECHDC1-203ENST00000368291 NPM1P06748 294 aaKnown RBP eCLIP36.94■■■■□ 3.5
ECHDC1-203ENST00000368291 UBTFP17480 764 aaKnown RBP36.94■■■■□ 3.5
ECHDC1-203ENST00000368291 P3H3Q8IVL6 736 aa36.94■■■■□ 3.5
ECHDC1-203ENST00000368291 PLB1Q6P1J6 1458 aa36.92■■■■□ 3.5
ECHDC1-203ENST00000368291 ABCA8O94911 1581 aa36.9■■■■□ 3.5
ECHDC1-203ENST00000368291 RANGAP1P46060 587 aaPredicted RBP36.9■■■■□ 3.5
ECHDC1-203ENST00000368291 KIF13AQ9H1H9 1805 aa36.88■■■■□ 3.49
ECHDC1-203ENST00000368291 KDM5BQ9UGL1 1544 aa36.85■■■■□ 3.49
ECHDC1-203ENST00000368291 EFCAB5A4FU69 1503 aa36.83■■■■□ 3.49
ECHDC1-203ENST00000368291 ZCCHC11Q5TAX3 1644 aaKnown RBP36.81■■■■□ 3.48
ECHDC1-203ENST00000368291 FHOD3Q2V2M9 1422 aa36.8■■■■□ 3.48
ECHDC1-203ENST00000368291 ABCC10Q5T3U5 1492 aa36.77■■■■□ 3.48
ECHDC1-203ENST00000368291 DIP2BQ9P265 1576 aa36.74■■■■□ 3.47
ECHDC1-203ENST00000368291 ASXL2Q76L83 1435 aa36.71■■■■□ 3.47
ECHDC1-203ENST00000368291 RAPGEF6Q8TEU7 1601 aa36.7■■■■□ 3.47
ECHDC1-203ENST00000368291 ARHGAP35Q9NRY4 1499 aa36.69■■■■□ 3.46
ECHDC1-203ENST00000368291 FAM69CQ0P6D2 419 aa36.64■■■■□ 3.46
ECHDC1-203ENST00000368291 ATP10BO94823 1461 aa36.57■■■■□ 3.45
ECHDC1-203ENST00000368291 NUP153P49790 1475 aaKnown RBP36.55■■■■□ 3.44
ECHDC1-203ENST00000368291 GLI2P10070 1586 aa36.53■■■■□ 3.44
ECHDC1-203ENST00000368291 WDR7Q9Y4E6 1490 aa36.52■■■■□ 3.44
ECHDC1-203ENST00000368291 ARID3CA6NKF2 412 aa36.52■■■■□ 3.44
ECHDC1-203ENST00000368291 EPRSP07814 1512 aaKnown RBP36.51■■■■□ 3.43
ECHDC1-203ENST00000368291 TSPOAP1O95153 1857 aa36.49■■■■□ 3.43
ECHDC1-203ENST00000368291 FMN1Q68DA7 1419 aa36.46■■■■□ 3.43
ECHDC1-203ENST00000368291 CLIP1P30622 1438 aa36.41■■■■□ 3.42
ECHDC1-203ENST00000368291 MAP3K4Q9Y6R4 1608 aa36.4■■■■□ 3.42
ECHDC1-203ENST00000368291 PPRC1Q5VV67 1664 aaKnown RBP36.39■■■■□ 3.42
ECHDC1-203ENST00000368291 LOC105371045A0A1W2PR82 267 aa36.37■■■■□ 3.41
ECHDC1-203ENST00000368291 HECW1Q76N89 1606 aa36.34■■■■□ 3.41
ECHDC1-203ENST00000368291 KCNH8Q96L42 1107 aa36.31■■■■□ 3.4
ECHDC1-203ENST00000368291 CDK13Q14004 1512 aaKnown RBP36.31■■■■□ 3.4
ECHDC1-203ENST00000368291 LRRIQ1Q96JM4 1722 aa36.3■■■■□ 3.4
ECHDC1-203ENST00000368291 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.29■■■■□ 3.4
ECHDC1-203ENST00000368291 HNRNPUL2Q1KMD3 747 aaKnown RBP36.29■■■■□ 3.4
ECHDC1-203ENST00000368291 CFAP43Q8NDM7 1665 aa36.28■■■■□ 3.4
ECHDC1-203ENST00000368291 CEP162Q5TB80 1403 aa36.27■■■■□ 3.4
ECHDC1-203ENST00000368291 PCF11O94913 1555 aaKnown RBP36.26■■■■□ 3.39
ECHDC1-203ENST00000368291 CASKIN1Q8WXD9 1431 aa36.21■■■■□ 3.39
ECHDC1-203ENST00000368291 ATP1B4Q9UN42 357 aaPredicted RBP36.21■■■■□ 3.39
ECHDC1-203ENST00000368291 ABCA9Q8IUA7 1624 aa36.2■■■■□ 3.38
ECHDC1-203ENST00000368291 CD109Q6YHK3 1445 aa36.17■■■■□ 3.38
ECHDC1-203ENST00000368291 PLEKHD1A6NEE1 506 aa36.17■■■■□ 3.38
ECHDC1-203ENST00000368291 MAGI3Q5TCQ9 1506 aa36.13■■■■□ 3.38
ECHDC1-203ENST00000368291 KDM6BO15054 1643 aa36.13■■■■□ 3.37
ECHDC1-203ENST00000368291 FYCO1Q9BQS8 1478 aa36.13■■■■□ 3.37
ECHDC1-203ENST00000368291 TEX14Q8IWB6 1497 aa36.11■■■■□ 3.37
ECHDC1-203ENST00000368291 CCDC18Q5T9S5 1454 aa36.05■■■■□ 3.36
ECHDC1-203ENST00000368291 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.04■■■■□ 3.36
ECHDC1-203ENST00000368291 COL17A1Q9UMD9 1497 aaPredicted RBP36.01■■■■□ 3.35
ECHDC1-203ENST00000368291 TTC37Q6PGP7 1564 aa36■■■■□ 3.35
ECHDC1-203ENST00000368291 CDK11AQ9UQ88 783 aaPredicted RBP35.99■■■■□ 3.35
ECHDC1-203ENST00000368291 TROQ12816 1431 aaPredicted RBP35.97■■■■□ 3.35
ECHDC1-203ENST00000368291 KIF14Q15058 1648 aa35.96■■■■□ 3.35
ECHDC1-203ENST00000368291 NEO1Q92859 1461 aa35.84■■■■□ 3.33
ECHDC1-203ENST00000368291 VPS8Q8N3P4 1428 aa35.83■■■■□ 3.33
ECHDC1-203ENST00000368291 MYO5CQ9NQX4 1742 aa35.83■■■■□ 3.33
ECHDC1-203ENST00000368291 ARAP3Q8WWN8 1544 aa35.82■■■■□ 3.33
ECHDC1-203ENST00000368291 PHLDB1Q86UU1 1377 aa35.79■■■■□ 3.32
ECHDC1-203ENST00000368291 PLCH2O75038 1416 aa35.78■■■■□ 3.32
ECHDC1-203ENST00000368291 FANCAO15360 1455 aa35.76■■■■□ 3.32
ECHDC1-203ENST00000368291 CFAP74Q9C0B2 1584 aa35.76■■■■□ 3.32
ECHDC1-203ENST00000368291 CDC42BPBQ9Y5S2 1711 aa35.71■■■■□ 3.31
ECHDC1-203ENST00000368291 AKNAQ7Z591 1439 aa35.7■■■■□ 3.31
ECHDC1-203ENST00000368291 CDC42BPAQ5VT25 1732 aa35.68■■■■□ 3.3
ECHDC1-203ENST00000368291 TIAM1Q13009 1591 aa35.66■■■■□ 3.3
ECHDC1-203ENST00000368291 FRMPD1Q5SYB0 1578 aa35.66■■■■□ 3.3
ECHDC1-203ENST00000368291 MTUS2Q5JR59 1369 aa35.66■■■■□ 3.3
ECHDC1-203ENST00000368291 PREX2Q70Z35 1606 aa35.66■■■■□ 3.3
ECHDC1-203ENST00000368291 EHBP1L1Q8N3D4 1523 aa35.64■■■■□ 3.3
ECHDC1-203ENST00000368291 RICTORQ6R327 1708 aa35.63■■■■□ 3.29
ECHDC1-203ENST00000368291 RAPGEF3O95398 923 aa35.62■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms