RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 KIF27Q86VH2 1401 aa15.48■□□□□ 0.07
NECTIN4-201ENST00000368012 RAB3GAP2Q9H2M9 1393 aa15.48■□□□□ 0.07
NECTIN4-201ENST00000368012 PRXQ9BXM0 1461 aa15.47■□□□□ 0.07
NECTIN4-201ENST00000368012 PEG3Q9GZU2 1588 aa15.46■□□□□ 0.07
NECTIN4-201ENST00000368012 DNAJC5BQ9UF47 199 aa15.45■□□□□ 0.06
NECTIN4-201ENST00000368012 TOP2BQ02880 1626 aa15.44■□□□□ 0.06
NECTIN4-201ENST00000368012 FAM9BQ8IZU0 186 aa15.44■□□□□ 0.06
NECTIN4-201ENST00000368012 TONSLQ96HA7 1378 aa15.42■□□□□ 0.06
NECTIN4-201ENST00000368012 ZNF326Q5BKZ1 582 aaKnown RBP15.41■□□□□ 0.06
NECTIN4-201ENST00000368012 RBM19Q9Y4C8 960 aaKnown RBP15.41■□□□□ 0.06
NECTIN4-201ENST00000368012 RRBP1Q9P2E9 1410 aaKnown RBP15.41■□□□□ 0.06
NECTIN4-201ENST00000368012 ARHGAP35Q9NRY4 1499 aa15.4■□□□□ 0.06
NECTIN4-201ENST00000368012 RRP7BPQ9NSQ0 103 aa15.39■□□□□ 0.05
NECTIN4-201ENST00000368012 CDK11AQ9UQ88 783 aaPredicted RBP15.38■□□□□ 0.05
NECTIN4-201ENST00000368012 CUX1P39880 1505 aa15.38■□□□□ 0.05
NECTIN4-201ENST00000368012 CUX2O14529 1486 aa15.36■□□□□ 0.05
NECTIN4-201ENST00000368012 ERICH3Q5RHP9 1530 aa15.36■□□□□ 0.05
NECTIN4-201ENST00000368012 SETD5Q9C0A6 1442 aa15.33■□□□□ 0.04
NECTIN4-201ENST00000368012 PHLDB1Q86UU1 1377 aa15.33■□□□□ 0.04
NECTIN4-201ENST00000368012 CARMIL1Q5VZK9 1371 aa15.31■□□□□ 0.04
NECTIN4-201ENST00000368012 IGF1RP08069 1367 aa15.31■□□□□ 0.04
NECTIN4-201ENST00000368012 FOXD1Q16676 465 aa15.3■□□□□ 0.04
NECTIN4-201ENST00000368012 PPP1R15AO75807 674 aaPredicted RBP15.29■□□□□ 0.04
NECTIN4-201ENST00000368012 SALL2Q9Y467 1007 aaPredicted RBP15.27■□□□□ 0.03
NECTIN4-201ENST00000368012 NBR1Q14596 966 aa15.26■□□□□ 0.03
NECTIN4-201ENST00000368012 B4GALNT3Q6L9W6 998 aa15.26■□□□□ 0.03
NECTIN4-201ENST00000368012 BIVM-ERCC5R4GMW8 1640 aa15.26■□□□□ 0.03
NECTIN4-201ENST00000368012 WDR97A6NE52 1622 aa15.26■□□□□ 0.03
NECTIN4-201ENST00000368012 MAPKBP1O60336 1514 aa15.26■□□□□ 0.03
NECTIN4-201ENST00000368012 MRS2Q9HD23 443 aa15.25■□□□□ 0.03
NECTIN4-201ENST00000368012 MTUS2Q5JR59 1369 aa15.24■□□□□ 0.03
NECTIN4-201ENST00000368012 MSH5O43196 834 aa15.23■□□□□ 0.03
NECTIN4-201ENST00000368012 FHOD3Q2V2M9 1422 aa15.22■□□□□ 0.03
NECTIN4-201ENST00000368012 NCAPD3P42695 1498 aa15.21■□□□□ 0.03
NECTIN4-201ENST00000368012 LRRC9Q6ZRR7 1453 aa15.21■□□□□ 0.03
NECTIN4-201ENST00000368012 CFTRP13569 1480 aa15.2■□□□□ 0.02
NECTIN4-201ENST00000368012 HSPA5P11021 654 aaKnown RBP15.17■□□□□ 0.02
NECTIN4-201ENST00000368012 TIAM1Q13009 1591 aa15.17■□□□□ 0.02
NECTIN4-201ENST00000368012 NPM2Q86SE8 214 aaKnown RBP15.17■□□□□ 0.02
NECTIN4-201ENST00000368012 ZNF777Q9ULD5 760 aaPredicted RBP15.17■□□□□ 0.02
NECTIN4-201ENST00000368012 EIF4G2P78344 907 aaKnown RBP eCLIP15.15■□□□□ 0.02
NECTIN4-201ENST00000368012 FGD5Q6ZNL6 1462 aa15.15■□□□□ 0.02
NECTIN4-201ENST00000368012 FHAD1B1AJZ9 1412 aa15.14■□□□□ 0.01
NECTIN4-201ENST00000368012 CCER2I3L3R5 266 aa15.14■□□□□ 0.01
NECTIN4-201ENST00000368012 CCDC184Q52MB2 194 aa15.13■□□□□ 0.01
NECTIN4-201ENST00000368012 CADPSQ9ULU8 1353 aa15.11■□□□□ 0.01
NECTIN4-201ENST00000368012 RAD54L2Q9Y4B4 1467 aa15.1■□□□□ 0.01
NECTIN4-201ENST00000368012 HMGXB3Q12766 1538 aa15.08■□□□□ 0.01
NECTIN4-201ENST00000368012 TIMELESSQ9UNS1 1208 aa15.08■□□□□ 0.01
NECTIN4-201ENST00000368012 KDM2AQ9Y2K7 1162 aa15.08■□□□□ 0
NECTIN4-201ENST00000368012 CCDC136Q96JN2 1154 aa15.07■□□□□ 0
NECTIN4-201ENST00000368012 SLC4A1APQ9BWU0 796 aaKnown RBP15.05■□□□□ 0
NECTIN4-201ENST00000368012 FBLN2P98095 1184 aa15.05■□□□□ -0
NECTIN4-201ENST00000368012 PCF11O94913 1555 aaKnown RBP15.05■□□□□ -0
NECTIN4-201ENST00000368012 L3MBTL2Q969R5 705 aa15.05■□□□□ -0
NECTIN4-201ENST00000368012 DEKP35659 375 aaKnown RBP15.04■□□□□ -0
NECTIN4-201ENST00000368012 TDRD9Q8NDG6 1382 aaKnown RBP15.03■□□□□ -0
NECTIN4-201ENST00000368012 PPP4R2Q9NY27 417 aa15.03■□□□□ -0
NECTIN4-201ENST00000368012 CCDC18Q5T9S5 1454 aa15.02■□□□□ -0
NECTIN4-201ENST00000368012 RTL5Q5HYW3 569 aaPredicted RBP15.02□□□□□ -0.01
NECTIN4-201ENST00000368012 RTN4Q9NQC3 1192 aaKnown RBP15.01□□□□□ -0.01
NECTIN4-201ENST00000368012 FGD6Q6ZV73 1430 aa15.01□□□□□ -0.01
NECTIN4-201ENST00000368012 WASHC2AQ641Q2 1341 aa15□□□□□ -0.01
NECTIN4-201ENST00000368012 PTPRKQ15262 1439 aa15□□□□□ -0.01
NECTIN4-201ENST00000368012 TMC1Q8TDI8 760 aa15□□□□□ -0.01
NECTIN4-201ENST00000368012 MAP3K1Q13233 1512 aa14.98□□□□□ -0.01
NECTIN4-201ENST00000368012 MPHOSPH9Q99550 1183 aa14.98□□□□□ -0.01
NECTIN4-201ENST00000368012 FANCD2Q9BXW9 1451 aa14.98□□□□□ -0.01
NECTIN4-201ENST00000368012 CC2D2AQ9P2K1 1620 aa14.96□□□□□ -0.01
NECTIN4-201ENST00000368012 ANP32AP39687 249 aaKnown RBP14.96□□□□□ -0.01
NECTIN4-201ENST00000368012 C11orf95C9JLR9 678 aaPredicted RBP14.96□□□□□ -0.02
NECTIN4-201ENST00000368012 CASKIN1Q8WXD9 1431 aa14.95□□□□□ -0.02
NECTIN4-201ENST00000368012 AQRO60306 1485 aaKnown RBP eCLIP14.95□□□□□ -0.02
NECTIN4-201ENST00000368012 UACAQ9BZF9 1416 aa14.94□□□□□ -0.02
NECTIN4-201ENST00000368012 PRKRIP1Q9H875 184 aaPredicted RBP14.93□□□□□ -0.02
NECTIN4-201ENST00000368012 FMN1Q68DA7 1419 aa14.93□□□□□ -0.02
NECTIN4-201ENST00000368012 NESP48681 1621 aa14.92□□□□□ -0.02
NECTIN4-201ENST00000368012 FYCO1Q9BQS8 1478 aa14.92□□□□□ -0.02
NECTIN4-201ENST00000368012 ANO8Q9HCE9 1232 aaPredicted RBP14.92□□□□□ -0.02
NECTIN4-201ENST00000368012 ZBTB47Q9UFB7 747 aaPredicted RBP14.91□□□□□ -0.02
NECTIN4-201ENST00000368012 NAIPQ13075 1403 aa14.91□□□□□ -0.02
NECTIN4-201ENST00000368012 PRKCSHP14314 528 aaPredicted RBP14.91□□□□□ -0.02
NECTIN4-201ENST00000368012 HFM1A2PYH4 1435 aa14.9□□□□□ -0.02
NECTIN4-201ENST00000368012 LAS1LQ9Y4W2 734 aaKnown RBP14.9□□□□□ -0.02
NECTIN4-201ENST00000368012 POLA1P09884 1462 aaPredicted RBP14.9□□□□□ -0.02
NECTIN4-201ENST00000368012 PAK3O75914 559 aaPredicted RBP14.89□□□□□ -0.03
NECTIN4-201ENST00000368012 NOP58Q9Y2X3 529 aaKnown RBP14.89□□□□□ -0.03
NECTIN4-201ENST00000368012 ZNF644Q9H582 1327 aaPredicted RBP14.89□□□□□ -0.03
NECTIN4-201ENST00000368012 NCOA2Q15596 1464 aa14.89□□□□□ -0.03
NECTIN4-201ENST00000368012 RGL3Q3MIN7 710 aa14.89□□□□□ -0.03
NECTIN4-201ENST00000368012 MYOM3Q5VTT5 1437 aa14.87□□□□□ -0.03
NECTIN4-201ENST00000368012 NBPF8Q3BBV2 869 aa14.87□□□□□ -0.03
NECTIN4-201ENST00000368012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.85□□□□□ -0.03
NECTIN4-201ENST00000368012 CFAP43Q8NDM7 1665 aa14.85□□□□□ -0.03
NECTIN4-201ENST00000368012 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.84□□□□□ -0.03
NECTIN4-201ENST00000368012 DAXXQ9UER7 740 aaPredicted RBP14.84□□□□□ -0.03
NECTIN4-201ENST00000368012 TOPBP1Q92547 1522 aa14.84□□□□□ -0.03
NECTIN4-201ENST00000368012 FANCIQ9NVI1 1328 aa14.83□□□□□ -0.03
NECTIN4-201ENST00000368012 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.83□□□□□ -0.03
NECTIN4-201ENST00000368012 CARD11Q9BXL7 1154 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms