RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 RUSC2Q8N2Y8 1516 aa25.09■■□□□ 1.61
SF3B5-201ENST00000367569 CUL7Q14999 1698 aa25.07■■□□□ 1.6
SF3B5-201ENST00000367569 KIAA0586Q9BVV6 1533 aa24.96■■□□□ 1.59
SF3B5-201ENST00000367569 CARMIL1Q5VZK9 1371 aa24.91■■□□□ 1.58
SF3B5-201ENST00000367569 KIF13AQ9H1H9 1805 aa24.89■■□□□ 1.57
SF3B5-201ENST00000367569 ADCY10Q96PN6 1610 aa24.83■■□□□ 1.57
SF3B5-201ENST00000367569 NPM1P06748 294 aaKnown RBP eCLIP24.83■■□□□ 1.57
SF3B5-201ENST00000367569 MAPKBP1O60336 1514 aa24.78■■□□□ 1.56
SF3B5-201ENST00000367569 ABCC10Q5T3U5 1492 aa24.77■■□□□ 1.56
SF3B5-201ENST00000367569 FAM69CQ0P6D2 419 aa24.77■■□□□ 1.56
SF3B5-201ENST00000367569 PTPRGP23470 1445 aa24.74■■□□□ 1.55
SF3B5-201ENST00000367569 RAPGEF2Q9Y4G8 1499 aa24.74■■□□□ 1.55
SF3B5-201ENST00000367569 TTBK1Q5TCY1 1321 aaPredicted RBP24.73■■□□□ 1.55
SF3B5-201ENST00000367569 IQGAP2Q13576 1575 aa24.72■■□□□ 1.55
SF3B5-201ENST00000367569 CTTNBP2Q8WZ74 1663 aa24.72■■□□□ 1.55
SF3B5-201ENST00000367569 DIP2BQ9P265 1576 aa24.71■■□□□ 1.55
SF3B5-201ENST00000367569 CARMIL2Q6F5E8 1435 aa24.7■■□□□ 1.55
SF3B5-201ENST00000367569 CHIC1Q5VXU3 224 aa24.7■■□□□ 1.54
SF3B5-201ENST00000367569 TNIKQ9UKE5 1360 aa24.69■■□□□ 1.54
SF3B5-201ENST00000367569 AEBP2Q6ZN18 517 aaPredicted RBP24.68■■□□□ 1.54
SF3B5-201ENST00000367569 FAM9AQ8IZU1 332 aaPredicted RBP24.65■■□□□ 1.54
SF3B5-201ENST00000367569 PRXQ9BXM0 1461 aa24.64■■□□□ 1.53
SF3B5-201ENST00000367569 DISP1Q96F81 1524 aa24.63■■□□□ 1.53
SF3B5-201ENST00000367569 ABCC2Q92887 1545 aa24.6■■□□□ 1.53
SF3B5-201ENST00000367569 UGGT2Q9NYU1 1516 aa24.57■■□□□ 1.52
SF3B5-201ENST00000367569 TSPOAP1O95153 1857 aa24.56■■□□□ 1.52
SF3B5-201ENST00000367569 UACAQ9BZF9 1416 aa24.55■■□□□ 1.52
SF3B5-201ENST00000367569 UHRF1BP1LA0JNW5 1464 aa24.55■■□□□ 1.52
SF3B5-201ENST00000367569 EEA1Q15075 1411 aa24.54■■□□□ 1.52
SF3B5-201ENST00000367569 CSRNP3Q8WYN3 585 aa24.52■■□□□ 1.52
SF3B5-201ENST00000367569 ASXL2Q76L83 1435 aa24.52■■□□□ 1.52
SF3B5-201ENST00000367569 KIAA0556O60303 1618 aa24.51■■□□□ 1.51
SF3B5-201ENST00000367569 PLB1Q6P1J6 1458 aa24.49■■□□□ 1.51
SF3B5-201ENST00000367569 KDM6BO15054 1643 aa24.48■■□□□ 1.51
SF3B5-201ENST00000367569 KIF21BO75037 1637 aa24.46■■□□□ 1.51
SF3B5-201ENST00000367569 EHMT2Q96KQ7 1210 aa24.46■■□□□ 1.51
SF3B5-201ENST00000367569 KDM5BQ9UGL1 1544 aa24.45■■□□□ 1.5
SF3B5-201ENST00000367569 GLI2P10070 1586 aa24.43■■□□□ 1.5
SF3B5-201ENST00000367569 PPRC1Q5VV67 1664 aaKnown RBP24.4■■□□□ 1.5
SF3B5-201ENST00000367569 ZCCHC11Q5TAX3 1644 aaKnown RBP24.39■■□□□ 1.5
SF3B5-201ENST00000367569 EPRSP07814 1512 aaKnown RBP24.37■■□□□ 1.49
SF3B5-201ENST00000367569 GOLGA3Q08378 1498 aa24.36■■□□□ 1.49
SF3B5-201ENST00000367569 RANGAP1P46060 587 aaPredicted RBP24.31■■□□□ 1.48
SF3B5-201ENST00000367569 MAP3K4Q9Y6R4 1608 aa24.31■■□□□ 1.48
SF3B5-201ENST00000367569 ABCA8O94911 1581 aa24.29■■□□□ 1.48
SF3B5-201ENST00000367569 SAMD9Q5K651 1589 aa24.29■■□□□ 1.48
SF3B5-201ENST00000367569 WDR7Q9Y4E6 1490 aa24.27■■□□□ 1.48
SF3B5-201ENST00000367569 KDM4FA0A1W2PPD8 638 aa24.27■■□□□ 1.48
SF3B5-201ENST00000367569 COL17A1Q9UMD9 1497 aaPredicted RBP24.26■■□□□ 1.47
SF3B5-201ENST00000367569 P3H3Q8IVL6 736 aa24.25■■□□□ 1.47
SF3B5-201ENST00000367569 TEX14Q8IWB6 1497 aa24.2■■□□□ 1.47
SF3B5-201ENST00000367569 KCNH8Q96L42 1107 aa24.19■■□□□ 1.46
SF3B5-201ENST00000367569 UBTFP17480 764 aaKnown RBP24.16■■□□□ 1.46
SF3B5-201ENST00000367569 FHOD3Q2V2M9 1422 aa24.16■■□□□ 1.46
SF3B5-201ENST00000367569 ARID3CA6NKF2 412 aa24.14■■□□□ 1.45
SF3B5-201ENST00000367569 CD109Q6YHK3 1445 aa24.13■■□□□ 1.45
SF3B5-201ENST00000367569 CFAP43Q8NDM7 1665 aa24.12■■□□□ 1.45
SF3B5-201ENST00000367569 EFCAB5A4FU69 1503 aa24.11■■□□□ 1.45
SF3B5-201ENST00000367569 ATP10BO94823 1461 aa24.11■■□□□ 1.45
SF3B5-201ENST00000367569 MAGI3Q5TCQ9 1506 aa24.1■■□□□ 1.45
SF3B5-201ENST00000367569 RAPGEF6Q8TEU7 1601 aa24.09■■□□□ 1.45
SF3B5-201ENST00000367569 ADGRL1O94910 1474 aa24.05■■□□□ 1.44
SF3B5-201ENST00000367569 ARHGAP35Q9NRY4 1499 aa24.01■■□□□ 1.43
SF3B5-201ENST00000367569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.96■■□□□ 1.43
SF3B5-201ENST00000367569 HNRNPUL2Q1KMD3 747 aaKnown RBP23.96■■□□□ 1.43
SF3B5-201ENST00000367569 ABCA9Q8IUA7 1624 aa23.95■■□□□ 1.43
SF3B5-201ENST00000367569 NUP153P49790 1475 aaKnown RBP23.95■■□□□ 1.42
SF3B5-201ENST00000367569 ARAP3Q8WWN8 1544 aa23.92■■□□□ 1.42
SF3B5-201ENST00000367569 LRRIQ1Q96JM4 1722 aa23.88■■□□□ 1.41
SF3B5-201ENST00000367569 CDK13Q14004 1512 aaKnown RBP23.88■■□□□ 1.41
SF3B5-201ENST00000367569 PCF11O94913 1555 aaKnown RBP23.87■■□□□ 1.41
SF3B5-201ENST00000367569 HECW1Q76N89 1606 aa23.87■■□□□ 1.41
SF3B5-201ENST00000367569 PHLDB1Q86UU1 1377 aa23.84■■□□□ 1.41
SF3B5-201ENST00000367569 CLIP1P30622 1438 aa23.84■■□□□ 1.41
SF3B5-201ENST00000367569 PLEKHD1A6NEE1 506 aa23.82■■□□□ 1.4
SF3B5-201ENST00000367569 RAPGEF3O95398 923 aa23.82■■□□□ 1.4
SF3B5-201ENST00000367569 NEO1Q92859 1461 aa23.81■■□□□ 1.4
SF3B5-201ENST00000367569 FMN1Q68DA7 1419 aa23.81■■□□□ 1.4
SF3B5-201ENST00000367569 ATP1B4Q9UN42 357 aaPredicted RBP23.8■■□□□ 1.4
SF3B5-201ENST00000367569 LOC105371045A0A1W2PR82 267 aa23.76■■□□□ 1.39
SF3B5-201ENST00000367569 CEP162Q5TB80 1403 aa23.76■■□□□ 1.39
SF3B5-201ENST00000367569 FRMPD1Q5SYB0 1578 aa23.74■■□□□ 1.39
SF3B5-201ENST00000367569 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.73■■□□□ 1.391e-6■■■□□ 14.8
SF3B5-201ENST00000367569 HECW2Q9P2P5 1572 aa23.71■■□□□ 1.39
SF3B5-201ENST00000367569 TTC37Q6PGP7 1564 aa23.69■■□□□ 1.38
SF3B5-201ENST00000367569 AKNAQ7Z591 1439 aa23.68■■□□□ 1.38
SF3B5-201ENST00000367569 FANCAO15360 1455 aa23.68■■□□□ 1.38
SF3B5-201ENST00000367569 DENND4BO75064 1496 aaPredicted RBP23.66■■□□□ 1.38
SF3B5-201ENST00000367569 CASKIN1Q8WXD9 1431 aa23.66■■□□□ 1.38
SF3B5-201ENST00000367569 KIF14Q15058 1648 aa23.66■■□□□ 1.38
SF3B5-201ENST00000367569 RICTORQ6R327 1708 aa23.64■■□□□ 1.38
SF3B5-201ENST00000367569 FYCO1Q9BQS8 1478 aa23.64■■□□□ 1.38
SF3B5-201ENST00000367569 ADAMTSL3P82987 1691 aa23.64■■□□□ 1.37
SF3B5-201ENST00000367569 CFAP74Q9C0B2 1584 aa23.63■■□□□ 1.37
SF3B5-201ENST00000367569 ARID4BQ4LE39 1312 aaPredicted RBP23.59■■□□□ 1.37
SF3B5-201ENST00000367569 BCORL1Q5H9F3 1711 aa23.59■■□□□ 1.37
SF3B5-201ENST00000367569 PTPRMP28827 1452 aa23.58■■□□□ 1.37
SF3B5-201ENST00000367569 CCDC18Q5T9S5 1454 aa23.58■■□□□ 1.37
SF3B5-201ENST00000367569 ARHGEF40Q8TER5 1519 aa23.58■■□□□ 1.36
SF3B5-201ENST00000367569 PLCH2O75038 1416 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms