RNA–Protein interactions for RNA: ENST00000367218.7

ATP2B4-204, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 8,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-204ENST00000367218 NAP1L5Q96NT1 182 aaPredicted RBP9.87□□□□□ -0.83
ATP2B4-204ENST00000367218 PABPN1Q86U42 306 aaKnown RBP eCLIP9.87□□□□□ -0.83
ATP2B4-204ENST00000367218 TNIKQ9UKE5 1360 aa9.86□□□□□ -0.83
ATP2B4-204ENST00000367218 CCER2I3L3R5 266 aa9.86□□□□□ -0.83
ATP2B4-204ENST00000367218 NCLP19338 710 aaKnown RBP9.85□□□□□ -0.83
ATP2B4-204ENST00000367218 ZNF777Q9ULD5 760 aaPredicted RBP9.85□□□□□ -0.83
ATP2B4-204ENST00000367218 RTN4Q9NQC3 1192 aaKnown RBP9.85□□□□□ -0.83
ATP2B4-204ENST00000367218 MYH16Q9H6N6 1097 aa9.84□□□□□ -0.83
ATP2B4-204ENST00000367218 SLC24A1O60721 1099 aa9.84□□□□□ -0.83
ATP2B4-204ENST00000367218 L1TD1Q5T7N2 865 aaKnown RBP9.84□□□□□ -0.83
ATP2B4-204ENST00000367218 LAS1LQ9Y4W2 734 aaKnown RBP9.84□□□□□ -0.83
ATP2B4-204ENST00000367218 HIRIP3Q9BW71 556 aaPredicted RBP9.83□□□□□ -0.84
ATP2B4-204ENST00000367218 MTUS2Q5JR59 1369 aa9.83□□□□□ -0.84
ATP2B4-204ENST00000367218 TIMELESSQ9UNS1 1208 aa9.82□□□□□ -0.84
ATP2B4-204ENST00000367218 TSHZ2Q9NRE2 1034 aa9.8□□□□□ -0.84
ATP2B4-204ENST00000367218 PTMAP06454 111 aaKnown RBP9.8□□□□□ -0.84
ATP2B4-204ENST00000367218 RSF1Q96T23 1441 aaPredicted RBP9.8□□□□□ -0.84
ATP2B4-204ENST00000367218 CEP164Q9UPV0 1460 aa9.79□□□□□ -0.84
ATP2B4-204ENST00000367218 CHIC2Q9UKJ5 165 aa9.78□□□□□ -0.84
ATP2B4-204ENST00000367218 ARID3CA6NKF2 412 aa9.78□□□□□ -0.84
ATP2B4-204ENST00000367218 DNTTIP2Q5QJE6 756 aaKnown RBP9.77□□□□□ -0.84
ATP2B4-204ENST00000367218 B4GALNT3Q6L9W6 998 aa9.77□□□□□ -0.85
ATP2B4-204ENST00000367218 CASC1Q6TDU7 716 aa9.74□□□□□ -0.85
ATP2B4-204ENST00000367218 CDK11BP21127 795 aaKnown RBP9.74□□□□□ -0.85
ATP2B4-204ENST00000367218 FBLN2P98095 1184 aa9.73□□□□□ -0.85
ATP2B4-204ENST00000367218 CDCA8Q53HL2 280 aa9.73□□□□□ -0.85
ATP2B4-204ENST00000367218 KDM2AQ9Y2K7 1162 aa9.73□□□□□ -0.85
ATP2B4-204ENST00000367218 TSPY4P0CV99 314 aa9.73□□□□□ -0.85
ATP2B4-204ENST00000367218 TSPY10P0CW01 314 aa9.73□□□□□ -0.85
ATP2B4-204ENST00000367218 RB1CC1Q8TDY2 1594 aa9.72□□□□□ -0.85
ATP2B4-204ENST00000367218 MSNP26038 577 aaKnown RBP9.71□□□□□ -0.85
ATP2B4-204ENST00000367218 PTMSP20962 102 aa9.71□□□□□ -0.85
ATP2B4-204ENST00000367218 TCERG1O14776 1098 aaKnown RBP9.71□□□□□ -0.86
ATP2B4-204ENST00000367218 MS4A1P11836 297 aa9.7□□□□□ -0.86
ATP2B4-204ENST00000367218 CHMP4BQ9H444 224 aaKnown RBP9.7□□□□□ -0.86
ATP2B4-204ENST00000367218 CCNB3Q8WWL7 1395 aa9.7□□□□□ -0.86
ATP2B4-204ENST00000367218 IPO9Q96P70 1041 aaKnown RBP9.7□□□□□ -0.86
ATP2B4-204ENST00000367218 USP35Q9P2H5 1018 aa9.7□□□□□ -0.86
ATP2B4-204ENST00000367218 RGS3P49796 1198 aa9.7□□□□□ -0.86
ATP2B4-204ENST00000367218 FTSJ3Q8IY81 847 aaKnown RBP9.69□□□□□ -0.86
ATP2B4-204ENST00000367218 RRP7BPQ9NSQ0 103 aa9.69□□□□□ -0.86
ATP2B4-204ENST00000367218 WRNQ14191 1432 aaPredicted RBP eCLIP9.69□□□□□ -0.86
ATP2B4-204ENST00000367218 CHAF1AQ13111 956 aaPredicted RBP9.69□□□□□ -0.86
ATP2B4-204ENST00000367218 KNSTRNQ9Y448 316 aa9.69□□□□□ -0.86
ATP2B4-204ENST00000367218 CFAP53Q96M91 514 aa9.69□□□□□ -0.86
ATP2B4-204ENST00000367218 HSP90AB1P08238 724 aaKnown RBP9.68□□□□□ -0.86
ATP2B4-204ENST00000367218 HSCBQ8IWL3 235 aa9.68□□□□□ -0.86
ATP2B4-204ENST00000367218 PNNQ9H307 717 aaKnown RBP9.68□□□□□ -0.86
ATP2B4-204ENST00000367218 ZRSR1Q15695 479 aaKnown RBP9.67□□□□□ -0.86
ATP2B4-204ENST00000367218 CHGAP10645 457 aaKnown RBP9.67□□□□□ -0.86
ATP2B4-204ENST00000367218 GOLGA6L6A8MZA4 724 aa9.66□□□□□ -0.86
ATP2B4-204ENST00000367218 SIN3AQ96ST3 1273 aa9.66□□□□□ -0.86
ATP2B4-204ENST00000367218 RSPH6AQ9H0K4 717 aa9.66□□□□□ -0.86
ATP2B4-204ENST00000367218 CARD11Q9BXL7 1154 aa9.66□□□□□ -0.86
ATP2B4-204ENST00000367218 CFAP44Q96MT7 982 aa9.65□□□□□ -0.86
ATP2B4-204ENST00000367218 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.65□□□□□ -0.865e-6■■■■□ 19.5
ATP2B4-204ENST00000367218 FANCIQ9NVI1 1328 aa9.64□□□□□ -0.87
ATP2B4-204ENST00000367218 KIF27Q86VH2 1401 aa9.64□□□□□ -0.87
ATP2B4-204ENST00000367218 SETD5Q9C0A6 1442 aa9.64□□□□□ -0.87
ATP2B4-204ENST00000367218 NRDCO43847 1150 aa9.64□□□□□ -0.87
ATP2B4-204ENST00000367218 AMER1Q5JTC6 1135 aaPredicted RBP9.63□□□□□ -0.87
ATP2B4-204ENST00000367218 VPS8Q8N3P4 1428 aa9.63□□□□□ -0.87
ATP2B4-204ENST00000367218 FHAD1B1AJZ9 1412 aa9.63□□□□□ -0.87
ATP2B4-204ENST00000367218 GBP4Q96PP9 640 aa9.63□□□□□ -0.87
ATP2B4-204ENST00000367218 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.62□□□□□ -0.87
ATP2B4-204ENST00000367218 STAG3Q9UJ98 1225 aa9.62□□□□□ -0.87
ATP2B4-204ENST00000367218 GOLGA6L3A6NEY3 463 aa9.6□□□□□ -0.87
ATP2B4-204ENST00000367218 ARID4BQ4LE39 1312 aaPredicted RBP9.59□□□□□ -0.87
ATP2B4-204ENST00000367218 RCAN3Q9UKA8 241 aa9.59□□□□□ -0.87
ATP2B4-204ENST00000367218 FRAT1Q92837 279 aaPredicted RBP9.59□□□□□ -0.87
ATP2B4-204ENST00000367218 NUDCQ9Y266 331 aa9.58□□□□□ -0.88
ATP2B4-204ENST00000367218 MAPK8IP3Q9UPT6 1336 aa9.58□□□□□ -0.88
ATP2B4-204ENST00000367218 PLCB2Q00722 1185 aa9.58□□□□□ -0.88
ATP2B4-204ENST00000367218 KIAA2012Q0VF49 1180 aa9.57□□□□□ -0.88
ATP2B4-204ENST00000367218 HSP90AA2PQ14568 343 aaPredicted RBP9.57□□□□□ -0.88
ATP2B4-204ENST00000367218 HSPA5P11021 654 aaKnown RBP9.57□□□□□ -0.88
ATP2B4-204ENST00000367218 ESF1Q9H501 851 aaKnown RBP9.56□□□□□ -0.88
ATP2B4-204ENST00000367218 SENP3-EIF4A1A0A087X0R7 540 aa9.56□□□□□ -0.88
ATP2B4-204ENST00000367218 RALBP1Q15311 655 aa9.56□□□□□ -0.88
ATP2B4-204ENST00000367218 KTN1Q86UP2 1357 aaKnown RBP9.55□□□□□ -0.88
ATP2B4-204ENST00000367218 MCCP23508 829 aa9.55□□□□□ -0.88
ATP2B4-204ENST00000367218 GSE1Q14687 1217 aa9.55□□□□□ -0.88
ATP2B4-204ENST00000367218 TMF1P82094 1093 aa9.55□□□□□ -0.88
ATP2B4-204ENST00000367218 PDE3BQ13370 1112 aa9.54□□□□□ -0.88
ATP2B4-204ENST00000367218 SYAP1Q96A49 352 aaPredicted RBP9.54□□□□□ -0.88
ATP2B4-204ENST00000367218 ARHGAP35Q9NRY4 1499 aa9.54□□□□□ -0.88
ATP2B4-204ENST00000367218 CC2D1BQ5T0F9 858 aaKnown RBP9.53□□□□□ -0.88
ATP2B4-204ENST00000367218 BAZ1AQ9NRL2 1556 aaPredicted RBP9.53□□□□□ -0.88
ATP2B4-204ENST00000367218 RGL3Q3MIN7 710 aa9.53□□□□□ -0.88
ATP2B4-204ENST00000367218 RAB3GAP2Q9H2M9 1393 aa9.53□□□□□ -0.88
ATP2B4-204ENST00000367218 GOLGA6L4A6NEF3 574 aa9.53□□□□□ -0.88
ATP2B4-204ENST00000367218 CFDP1Q9UEE9 299 aaPredicted RBP9.53□□□□□ -0.88
ATP2B4-204ENST00000367218 RWDD1Q9H446 243 aaPredicted RBP9.52□□□□□ -0.88
ATP2B4-204ENST00000367218 NEUROD2Q15784 382 aa9.52□□□□□ -0.89
ATP2B4-204ENST00000367218 SLKQ9H2G2 1235 aaPredicted RBP9.52□□□□□ -0.89
ATP2B4-204ENST00000367218 PMFBP1Q8TBY8 1022 aa9.51□□□□□ -0.89
ATP2B4-204ENST00000367218 PPP1R15AO75807 674 aaPredicted RBP9.51□□□□□ -0.89
ATP2B4-204ENST00000367218 PLEKHD1A6NEE1 506 aa9.51□□□□□ -0.89
ATP2B4-204ENST00000367218 GZF1Q9H116 711 aaPredicted RBP9.51□□□□□ -0.89
ATP2B4-204ENST00000367218 DDX11L8A8MPP1 907 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms