RNA–Protein interactions for RNA: ENST00000366873.6

CAPN8-202, Transcript of calpain 8, humanhuman

TSL 5 BASIC

Gene CAPN8, Length 2,596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-202ENST00000366873 NUP160Q12769 1436 aa15.82■□□□□ 0.12
CAPN8-202ENST00000366873 CEP170Q5SW79 1584 aa15.81■□□□□ 0.12
CAPN8-202ENST00000366873 TNIKQ9UKE5 1360 aa15.79■□□□□ 0.12
CAPN8-202ENST00000366873 KIAA0586Q9BVV6 1533 aa15.76■□□□□ 0.11
CAPN8-202ENST00000366873 OSCARQ8IYS5 282 aa15.76■□□□□ 0.11
CAPN8-202ENST00000366873 RANGAP1P46060 587 aaPredicted RBP15.71■□□□□ 0.11
CAPN8-202ENST00000366873 CTTNBP2Q8WZ74 1663 aa15.71■□□□□ 0.1
CAPN8-202ENST00000366873 CLASP1Q7Z460 1538 aa15.7■□□□□ 0.1
CAPN8-202ENST00000366873 JPH4Q96JJ6 628 aa15.7■□□□□ 0.1
CAPN8-202ENST00000366873 IQGAP2Q13576 1575 aa15.7■□□□□ 0.1
CAPN8-202ENST00000366873 CEP162Q5TB80 1403 aa15.67■□□□□ 0.1
CAPN8-202ENST00000366873 UGGT2Q9NYU1 1516 aa15.64■□□□□ 0.09
CAPN8-202ENST00000366873 CLIP1P30622 1438 aa15.63■□□□□ 0.09
CAPN8-202ENST00000366873 ARHGAP35Q9NRY4 1499 aa15.63■□□□□ 0.09
CAPN8-202ENST00000366873 DISP1Q96F81 1524 aa15.62■□□□□ 0.09
CAPN8-202ENST00000366873 SHROOM2Q13796 1616 aa15.62■□□□□ 0.09
CAPN8-202ENST00000366873 P3H3Q8IVL6 736 aa15.61■□□□□ 0.09
CAPN8-202ENST00000366873 PRG4Q92954 1404 aaPredicted RBP15.6■□□□□ 0.09
CAPN8-202ENST00000366873 SAMD9Q5K651 1589 aa15.59■□□□□ 0.09
CAPN8-202ENST00000366873 ERCC6L2Q5T890 1561 aa15.58■□□□□ 0.08
CAPN8-202ENST00000366873 ARAP1Q96P48 1450 aa15.58■□□□□ 0.08
CAPN8-202ENST00000366873 EFCAB5A4FU69 1503 aa15.56■□□□□ 0.08
CAPN8-202ENST00000366873 FHOD3Q2V2M9 1422 aa15.55■□□□□ 0.08
CAPN8-202ENST00000366873 KIAA0556O60303 1618 aa15.55■□□□□ 0.08
CAPN8-202ENST00000366873 CARMIL2Q6F5E8 1435 aa15.54■□□□□ 0.08
CAPN8-202ENST00000366873 TTBK1Q5TCY1 1321 aaPredicted RBP15.49■□□□□ 0.07
CAPN8-202ENST00000366873 ARHGEF11O15085 1522 aa15.48■□□□□ 0.07
CAPN8-202ENST00000366873 PTPRGP23470 1445 aa15.46■□□□□ 0.07
CAPN8-202ENST00000366873 VPS8Q8N3P4 1428 aa15.44■□□□□ 0.06
CAPN8-202ENST00000366873 FMN1Q68DA7 1419 aa15.44■□□□□ 0.06
CAPN8-202ENST00000366873 PLB1Q6P1J6 1458 aa15.42■□□□□ 0.06
CAPN8-202ENST00000366873 RIMBP3CA6NJZ7 1639 aa15.41■□□□□ 0.06
CAPN8-202ENST00000366873 RIMBP3BA6NNM3 1639 aa15.41■□□□□ 0.06
CAPN8-202ENST00000366873 RIMBP3Q9UFD9 1639 aa15.41■□□□□ 0.06
CAPN8-202ENST00000366873 DNAJC5Q9H3Z4 198 aa15.41■□□□□ 0.06
CAPN8-202ENST00000366873 CASKIN1Q8WXD9 1431 aa15.38■□□□□ 0.05
CAPN8-202ENST00000366873 CYB5RLQ6IPT4 315 aa15.37■□□□□ 0.05
CAPN8-202ENST00000366873 UACAQ9BZF9 1416 aa15.37■□□□□ 0.05
CAPN8-202ENST00000366873 ABCA8O94911 1581 aa15.37■□□□□ 0.05
CAPN8-202ENST00000366873 PCF11O94913 1555 aaKnown RBP15.36■□□□□ 0.05
CAPN8-202ENST00000366873 ATP1B4Q9UN42 357 aaPredicted RBP15.34■□□□□ 0.05
CAPN8-202ENST00000366873 NUP153P49790 1475 aaKnown RBP15.34■□□□□ 0.05
CAPN8-202ENST00000366873 FYCO1Q9BQS8 1478 aa15.34■□□□□ 0.05
CAPN8-202ENST00000366873 RAPGEF6Q8TEU7 1601 aa15.33■□□□□ 0.05
CAPN8-202ENST00000366873 ARID3CA6NKF2 412 aa15.32■□□□□ 0.04
CAPN8-202ENST00000366873 UHRF1BP1LA0JNW5 1464 aa15.31■□□□□ 0.04
CAPN8-202ENST00000366873 ABCC2Q92887 1545 aa15.31■□□□□ 0.04
CAPN8-202ENST00000366873 ADCY10Q96PN6 1610 aa15.3■□□□□ 0.04
CAPN8-202ENST00000366873 EPRSP07814 1512 aaKnown RBP15.29■□□□□ 0.04
CAPN8-202ENST00000366873 LRRIQ1Q96JM4 1722 aa15.29■□□□□ 0.04
CAPN8-202ENST00000366873 ATP10BO94823 1461 aa15.29■□□□□ 0.04
CAPN8-202ENST00000366873 HECW1Q76N89 1606 aa15.28■□□□□ 0.04
CAPN8-202ENST00000366873 CDK13Q14004 1512 aaKnown RBP15.27■□□□□ 0.04
CAPN8-202ENST00000366873 KANK4Q5T7N3 995 aaPredicted RBP15.27■□□□□ 0.03
CAPN8-202ENST00000366873 KDM5BQ9UGL1 1544 aa15.26■□□□□ 0.03
CAPN8-202ENST00000366873 PPARGC1BQ86YN6 1023 aaKnown RBP15.24■□□□□ 0.03
CAPN8-202ENST00000366873 MAP3K1Q13233 1512 aa15.23■□□□□ 0.03
CAPN8-202ENST00000366873 SENP3Q9H4L4 574 aaPredicted RBP15.23■□□□□ 0.03
CAPN8-202ENST00000366873 CCDC18Q5T9S5 1454 aa15.23■□□□□ 0.03
CAPN8-202ENST00000366873 TIAM1Q13009 1591 aa15.23■□□□□ 0.03
CAPN8-202ENST00000366873 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.23■□□□□ 0.03
CAPN8-202ENST00000366873 HNRNPUL2Q1KMD3 747 aaKnown RBP15.23■□□□□ 0.03
CAPN8-202ENST00000366873 APLP2Q06481 763 aa15.22■□□□□ 0.03
CAPN8-202ENST00000366873 PCGF6Q9BYE7 350 aa15.22■□□□□ 0.03
CAPN8-202ENST00000366873 MAGI3Q5TCQ9 1506 aa15.21■□□□□ 0.03
CAPN8-202ENST00000366873 ZCCHC11Q5TAX3 1644 aaKnown RBP15.19■□□□□ 0.02
CAPN8-202ENST00000366873 LRRC9Q6ZRR7 1453 aa15.19■□□□□ 0.02
CAPN8-202ENST00000366873 CFAP43Q8NDM7 1665 aa15.18■□□□□ 0.02
CAPN8-202ENST00000366873 NPM1P06748 294 aaKnown RBP eCLIP15.17■□□□□ 0.02
CAPN8-202ENST00000366873 PLEKHD1A6NEE1 506 aa15.17■□□□□ 0.02
CAPN8-202ENST00000366873 CDK11AQ9UQ88 783 aaPredicted RBP15.16■□□□□ 0.02
CAPN8-202ENST00000366873 MTUS2Q5JR59 1369 aa15.15■□□□□ 0.02
CAPN8-202ENST00000366873 ASXL2Q76L83 1435 aa15.14■□□□□ 0.01
CAPN8-202ENST00000366873 TROQ12816 1431 aaPredicted RBP15.13■□□□□ 0.01
CAPN8-202ENST00000366873 HRCP23327 699 aa15.11■□□□□ 0.01
CAPN8-202ENST00000366873 WDR7Q9Y4E6 1490 aa15.1■□□□□ 0.01
CAPN8-202ENST00000366873 KCNH8Q96L42 1107 aa15.1■□□□□ 0.01
CAPN8-202ENST00000366873 MAPKBP1O60336 1514 aa15.1■□□□□ 0.01
CAPN8-202ENST00000366873 EHBP1L1Q8N3D4 1523 aa15.1■□□□□ 0.01
CAPN8-202ENST00000366873 KIF14Q15058 1648 aa15.07■□□□□ 0
CAPN8-202ENST00000366873 NCOA2Q15596 1464 aa15.07■□□□□ 0
CAPN8-202ENST00000366873 PHLDB1Q86UU1 1377 aa15.06■□□□□ 0
CAPN8-202ENST00000366873 ABCC10Q5T3U5 1492 aa15.05■□□□□ -0
CAPN8-202ENST00000366873 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.04■□□□□ -0
CAPN8-202ENST00000366873 SUPT6HQ7KZ85 1726 aaKnown RBP15.02■□□□□ -0
CAPN8-202ENST00000366873 TTC37Q6PGP7 1564 aa15□□□□□ -0.01
CAPN8-202ENST00000366873 GPATCH8Q9UKJ3 1502 aaKnown RBP15□□□□□ -0.01
CAPN8-202ENST00000366873 FAM69CQ0P6D2 419 aa14.99□□□□□ -0.01
CAPN8-202ENST00000366873 CCNB3Q8WWL7 1395 aa14.99□□□□□ -0.01
CAPN8-202ENST00000366873 MYOM3Q5VTT5 1437 aa14.98□□□□□ -0.01
CAPN8-202ENST00000366873 DIP2BQ9P265 1576 aa14.98□□□□□ -0.01
CAPN8-202ENST00000366873 ABCA9Q8IUA7 1624 aa14.97□□□□□ -0.01
CAPN8-202ENST00000366873 GLI2P10070 1586 aa14.96□□□□□ -0.02
CAPN8-202ENST00000366873 PLCH2O75038 1416 aa14.95□□□□□ -0.02
CAPN8-202ENST00000366873 CFDP1Q9UEE9 299 aaPredicted RBP14.94□□□□□ -0.02
CAPN8-202ENST00000366873 ZNF644Q9H582 1327 aaPredicted RBP14.94□□□□□ -0.02
CAPN8-202ENST00000366873 CD109Q6YHK3 1445 aa14.94□□□□□ -0.02
CAPN8-202ENST00000366873 FGD6Q6ZV73 1430 aa14.94□□□□□ -0.02
CAPN8-202ENST00000366873 CDC42BPAQ5VT25 1732 aa14.94□□□□□ -0.02
CAPN8-202ENST00000366873 RRBP1Q9P2E9 1410 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms