RNA–Protein interactions for RNA: ENST00000366792.3

PARP1-202, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 3 BASIC

Gene PARP1, Length 553 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-202ENST00000366792 JPH4Q96JJ6 628 aa35.48■■■■□ 3.27
PARP1-202ENST00000366792 KIAA0586Q9BVV6 1533 aa35.47■■■■□ 3.27
PARP1-202ENST00000366792 PRG4Q92954 1404 aaPredicted RBP35.46■■■■□ 3.27
PARP1-202ENST00000366792 RAPGEF2Q9Y4G8 1499 aa35.45■■■■□ 3.27
PARP1-202ENST00000366792 CHIC1Q5VXU3 224 aa35.3■■■■□ 3.24
PARP1-202ENST00000366792 IQGAP2Q13576 1575 aa35.3■■■■□ 3.24
PARP1-202ENST00000366792 PRXQ9BXM0 1461 aa35.27■■■■□ 3.24
PARP1-202ENST00000366792 EEA1Q15075 1411 aa35.23■■■■□ 3.23
PARP1-202ENST00000366792 CSRNP3Q8WYN3 585 aa35.21■■■■□ 3.23
PARP1-202ENST00000366792 CTTNBP2Q8WZ74 1663 aa35.16■■■■□ 3.22
PARP1-202ENST00000366792 FAM9AQ8IZU1 332 aaPredicted RBP35.14■■■■□ 3.22
PARP1-202ENST00000366792 CARMIL2Q6F5E8 1435 aa35.13■■■■□ 3.21
PARP1-202ENST00000366792 TRHP20396 242 aaPredicted RBP35.08■■■■□ 3.21
PARP1-202ENST00000366792 UGGT2Q9NYU1 1516 aa35.06■■■■□ 3.2
PARP1-202ENST00000366792 TTBK1Q5TCY1 1321 aaPredicted RBP35.03■■■■□ 3.2
PARP1-202ENST00000366792 DISP1Q96F81 1524 aa35.02■■■■□ 3.2
PARP1-202ENST00000366792 TNIKQ9UKE5 1360 aa35.01■■■■□ 3.2
PARP1-202ENST00000366792 PTPRGP23470 1445 aa35.01■■■■□ 3.2
PARP1-202ENST00000366792 KIAA0556O60303 1618 aa34.95■■■■□ 3.19
PARP1-202ENST00000366792 ADCY10Q96PN6 1610 aa34.94■■■■□ 3.18
PARP1-202ENST00000366792 KIF21BO75037 1637 aa34.89■■■■□ 3.18
PARP1-202ENST00000366792 GOLGA3Q08378 1498 aa34.89■■■■□ 3.18
PARP1-202ENST00000366792 NPM1P06748 294 aaKnown RBP eCLIP34.87■■■■□ 3.17
PARP1-202ENST00000366792 UACAQ9BZF9 1416 aa34.77■■■■□ 3.16
PARP1-202ENST00000366792 EHMT2Q96KQ7 1210 aa34.74■■■■□ 3.15
PARP1-202ENST00000366792 UHRF1BP1LA0JNW5 1464 aa34.72■■■■□ 3.15
PARP1-202ENST00000366792 MAPKBP1O60336 1514 aa34.72■■■■□ 3.15
PARP1-202ENST00000366792 ABCC2Q92887 1545 aa34.71■■■■□ 3.15
PARP1-202ENST00000366792 RANGAP1P46060 587 aaPredicted RBP34.68■■■■□ 3.14
PARP1-202ENST00000366792 P3H3Q8IVL6 736 aa34.68■■■■□ 3.14
PARP1-202ENST00000366792 SAMD9Q5K651 1589 aa34.66■■■■□ 3.14
PARP1-202ENST00000366792 UBTFP17480 764 aaKnown RBP34.63■■■■□ 3.13
PARP1-202ENST00000366792 PLB1Q6P1J6 1458 aa34.63■■■■□ 3.13
PARP1-202ENST00000366792 KIF13AQ9H1H9 1805 aa34.62■■■■□ 3.13
PARP1-202ENST00000366792 ABCC10Q5T3U5 1492 aa34.58■■■■□ 3.13
PARP1-202ENST00000366792 ABCA8O94911 1581 aa34.57■■■■□ 3.12
PARP1-202ENST00000366792 KDM5BQ9UGL1 1544 aa34.56■■■■□ 3.12
PARP1-202ENST00000366792 DIP2BQ9P265 1576 aa34.54■■■■□ 3.12
PARP1-202ENST00000366792 FAM69CQ0P6D2 419 aa34.54■■■■□ 3.12
PARP1-202ENST00000366792 ZCCHC11Q5TAX3 1644 aaKnown RBP34.54■■■■□ 3.12
PARP1-202ENST00000366792 ASXL2Q76L83 1435 aa34.51■■■■□ 3.12
PARP1-202ENST00000366792 EFCAB5A4FU69 1503 aa34.5■■■■□ 3.11
PARP1-202ENST00000366792 FHOD3Q2V2M9 1422 aa34.48■■■■□ 3.11
PARP1-202ENST00000366792 RAPGEF6Q8TEU7 1601 aa34.39■■■■□ 3.1
PARP1-202ENST00000366792 ARID3CA6NKF2 412 aa34.36■■■■□ 3.09
PARP1-202ENST00000366792 WDR7Q9Y4E6 1490 aa34.32■■■■□ 3.08
PARP1-202ENST00000366792 TSPOAP1O95153 1857 aa34.31■■■■□ 3.08
PARP1-202ENST00000366792 EPRSP07814 1512 aaKnown RBP34.3■■■■□ 3.08
PARP1-202ENST00000366792 GLI2P10070 1586 aa34.3■■■■□ 3.08
PARP1-202ENST00000366792 ARHGAP35Q9NRY4 1499 aa34.29■■■■□ 3.08
PARP1-202ENST00000366792 ATP10BO94823 1461 aa34.27■■■■□ 3.08
PARP1-202ENST00000366792 NUP153P49790 1475 aaKnown RBP34.24■■■■□ 3.07
PARP1-202ENST00000366792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.2■■■■□ 3.07
PARP1-202ENST00000366792 HNRNPUL2Q1KMD3 747 aaKnown RBP34.2■■■■□ 3.07
PARP1-202ENST00000366792 KCNH8Q96L42 1107 aa34.18■■■■□ 3.06
PARP1-202ENST00000366792 FMN1Q68DA7 1419 aa34.17■■■■□ 3.06
PARP1-202ENST00000366792 MAP3K4Q9Y6R4 1608 aa34.17■■■■□ 3.06
PARP1-202ENST00000366792 PPRC1Q5VV67 1664 aaKnown RBP34.12■■■■□ 3.05
PARP1-202ENST00000366792 ATP1B4Q9UN42 357 aaPredicted RBP34.07■■■■□ 3.04
PARP1-202ENST00000366792 CLIP1P30622 1438 aa34.06■■■■□ 3.04
PARP1-202ENST00000366792 KDM6BO15054 1643 aa34.06■■■■□ 3.04
PARP1-202ENST00000366792 CFAP43Q8NDM7 1665 aa34.06■■■■□ 3.04
PARP1-202ENST00000366792 HECW1Q76N89 1606 aa34.05■■■■□ 3.04
PARP1-202ENST00000366792 TEX14Q8IWB6 1497 aa34.03■■■■□ 3.04
PARP1-202ENST00000366792 CDK13Q14004 1512 aaKnown RBP34.02■■■■□ 3.04
PARP1-202ENST00000366792 CD109Q6YHK3 1445 aa34.02■■■■□ 3.04
PARP1-202ENST00000366792 PLEKHD1A6NEE1 506 aa33.98■■■■□ 3.03
PARP1-202ENST00000366792 ABCA9Q8IUA7 1624 aa33.94■■■■□ 3.02
PARP1-202ENST00000366792 MAGI3Q5TCQ9 1506 aa33.94■■■■□ 3.02
PARP1-202ENST00000366792 PCF11O94913 1555 aaKnown RBP33.93■■■■□ 3.02
PARP1-202ENST00000366792 LOC105371045A0A1W2PR82 267 aa33.89■■■■□ 3.02
PARP1-202ENST00000366792 CEP162Q5TB80 1403 aa33.87■■■■□ 3.01
PARP1-202ENST00000366792 CASKIN1Q8WXD9 1431 aa33.87■■■■□ 3.01
PARP1-202ENST00000366792 LRRIQ1Q96JM4 1722 aa33.86■■■■□ 3.01
PARP1-202ENST00000366792 CDK11AQ9UQ88 783 aaPredicted RBP33.81■■■■□ 3
PARP1-202ENST00000366792 FYCO1Q9BQS8 1478 aa33.81■■■■□ 3
PARP1-202ENST00000366792 COL17A1Q9UMD9 1497 aaPredicted RBP33.8■■■■□ 3
PARP1-202ENST00000366792 CCDC18Q5T9S5 1454 aa33.78■■■■□ 3
PARP1-202ENST00000366792 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.78■■■■□ 36e-7■■□□□ 13
PARP1-202ENST00000366792 TTC37Q6PGP7 1564 aa33.75■■■□□ 2.99
PARP1-202ENST00000366792 TROQ12816 1431 aaPredicted RBP33.71■■■□□ 2.99
PARP1-202ENST00000366792 KIF14Q15058 1648 aa33.68■■■□□ 2.98
PARP1-202ENST00000366792 NEO1Q92859 1461 aa33.67■■■□□ 2.98
PARP1-202ENST00000366792 PHLDB1Q86UU1 1377 aa33.65■■■□□ 2.98
PARP1-202ENST00000366792 ARAP3Q8WWN8 1544 aa33.64■■■□□ 2.98
PARP1-202ENST00000366792 FANCAO15360 1455 aa33.61■■■□□ 2.97
PARP1-202ENST00000366792 CFAP74Q9C0B2 1584 aa33.6■■■□□ 2.97
PARP1-202ENST00000366792 MYO5CQ9NQX4 1742 aa33.58■■■□□ 2.97
PARP1-202ENST00000366792 PLCH2O75038 1416 aa33.55■■■□□ 2.96
PARP1-202ENST00000366792 AKNAQ7Z591 1439 aa33.53■■■□□ 2.96
PARP1-202ENST00000366792 RAPGEF3O95398 923 aa33.5■■■□□ 2.95
PARP1-202ENST00000366792 VPS8Q8N3P4 1428 aa33.46■■■□□ 2.95
PARP1-202ENST00000366792 DENND4BO75064 1496 aaPredicted RBP33.45■■■□□ 2.95
PARP1-202ENST00000366792 ARHGAP5Q13017 1502 aa33.45■■■□□ 2.95
PARP1-202ENST00000366792 FRMPD1Q5SYB0 1578 aa33.45■■■□□ 2.95
PARP1-202ENST00000366792 EFCAB2Q5VUJ9 269 aa33.44■■■□□ 2.94
PARP1-202ENST00000366792 MTUS2Q5JR59 1369 aa33.44■■■□□ 2.94
PARP1-202ENST00000366792 ADGRL1O94910 1474 aa33.43■■■□□ 2.94
PARP1-202ENST00000366792 AEBP2Q6ZN18 517 aaPredicted RBP33.41■■■□□ 2.94
PARP1-202ENST00000366792 RICTORQ6R327 1708 aa33.4■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms