RNA–Protein interactions for RNA: ENST00000366259.2

LINC00449-201, long intergenic non-protein coding RNA 449, humanhuman

TSL 2 BASIC

Gene LINC00449, Length 872 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00449-201ENST00000366259 RUSC2Q8N2Y8 1516 aa21.93■■□□□ 1.1
LINC00449-201ENST00000366259 IGF1RP08069 1367 aa21.84■■□□□ 1.09
LINC00449-201ENST00000366259 ADCY10Q96PN6 1610 aa21.79■■□□□ 1.08
LINC00449-201ENST00000366259 KIF27Q86VH2 1401 aa21.79■■□□□ 1.08
LINC00449-201ENST00000366259 KIAA0586Q9BVV6 1533 aa21.78■■□□□ 1.08
LINC00449-201ENST00000366259 CUL7Q14999 1698 aa21.78■■□□□ 1.08
LINC00449-201ENST00000366259 FAM69CQ0P6D2 419 aa21.77■■□□□ 1.08
LINC00449-201ENST00000366259 NPM1P06748 294 aaKnown RBP eCLIP21.76■■□□□ 1.07
LINC00449-201ENST00000366259 ABCC10Q5T3U5 1492 aa21.75■■□□□ 1.07
LINC00449-201ENST00000366259 MAPKBP1O60336 1514 aa21.72■■□□□ 1.07
LINC00449-201ENST00000366259 DIP2BQ9P265 1576 aa21.71■■□□□ 1.07
LINC00449-201ENST00000366259 TTBK1Q5TCY1 1321 aaPredicted RBP21.68■■□□□ 1.06
LINC00449-201ENST00000366259 CARMIL1Q5VZK9 1371 aa21.68■■□□□ 1.06
LINC00449-201ENST00000366259 TSPOAP1O95153 1857 aa21.68■■□□□ 1.06
LINC00449-201ENST00000366259 PTPRGP23470 1445 aa21.63■■□□□ 1.05
LINC00449-201ENST00000366259 IQGAP2Q13576 1575 aa21.57■■□□□ 1.04
LINC00449-201ENST00000366259 TNIKQ9UKE5 1360 aa21.57■■□□□ 1.04
LINC00449-201ENST00000366259 CARMIL2Q6F5E8 1435 aa21.56■■□□□ 1.04
LINC00449-201ENST00000366259 KDM6BO15054 1643 aa21.55■■□□□ 1.04
LINC00449-201ENST00000366259 ABCC2Q92887 1545 aa21.52■■□□□ 1.04
LINC00449-201ENST00000366259 DISP1Q96F81 1524 aa21.5■■□□□ 1.03
LINC00449-201ENST00000366259 ASXL2Q76L83 1435 aa21.48■■□□□ 1.03
LINC00449-201ENST00000366259 RAPGEF2Q9Y4G8 1499 aa21.45■■□□□ 1.03
LINC00449-201ENST00000366259 PPRC1Q5VV67 1664 aaKnown RBP21.45■■□□□ 1.02
LINC00449-201ENST00000366259 KDM4FA0A1W2PPD8 638 aa21.45■■□□□ 1.02
LINC00449-201ENST00000366259 UACAQ9BZF9 1416 aa21.45■■□□□ 1.02
LINC00449-201ENST00000366259 UHRF1BP1LA0JNW5 1464 aa21.45■■□□□ 1.02
LINC00449-201ENST00000366259 PLB1Q6P1J6 1458 aa21.44■■□□□ 1.02
LINC00449-201ENST00000366259 UGGT2Q9NYU1 1516 aa21.41■■□□□ 1.02
LINC00449-201ENST00000366259 GLI2P10070 1586 aa21.4■■□□□ 1.02
LINC00449-201ENST00000366259 KIAA0556O60303 1618 aa21.38■■□□□ 1.01
LINC00449-201ENST00000366259 ZCCHC11Q5TAX3 1644 aaKnown RBP21.37■■□□□ 1.01
LINC00449-201ENST00000366259 KDM5BQ9UGL1 1544 aa21.37■■□□□ 1.01
LINC00449-201ENST00000366259 EPRSP07814 1512 aaKnown RBP21.34■■□□□ 1.01
LINC00449-201ENST00000366259 CTTNBP2Q8WZ74 1663 aa21.34■■□□□ 1.01
LINC00449-201ENST00000366259 MAP3K4Q9Y6R4 1608 aa21.32■■□□□ 1
LINC00449-201ENST00000366259 COL17A1Q9UMD9 1497 aaPredicted RBP21.31■■□□□ 1
LINC00449-201ENST00000366259 WDR7Q9Y4E6 1490 aa21.23■□□□□ 0.99
LINC00449-201ENST00000366259 TEX14Q8IWB6 1497 aa21.21■□□□□ 0.99
LINC00449-201ENST00000366259 ADGRL1O94910 1474 aa21.2■□□□□ 0.98
LINC00449-201ENST00000366259 GOLGA3Q08378 1498 aa21.2■□□□□ 0.98
LINC00449-201ENST00000366259 PRXQ9BXM0 1461 aa21.2■□□□□ 0.98
LINC00449-201ENST00000366259 ABCA8O94911 1581 aa21.19■□□□□ 0.98
LINC00449-201ENST00000366259 KCNH8Q96L42 1107 aa21.18■□□□□ 0.98
LINC00449-201ENST00000366259 CD109Q6YHK3 1445 aa21.13■□□□□ 0.97
LINC00449-201ENST00000366259 CFAP43Q8NDM7 1665 aa21.13■□□□□ 0.97
LINC00449-201ENST00000366259 P3H3Q8IVL6 736 aa21.13■□□□□ 0.97
LINC00449-201ENST00000366259 ARID3CA6NKF2 412 aa21.11■□□□□ 0.97
LINC00449-201ENST00000366259 MAGI3Q5TCQ9 1506 aa21.09■□□□□ 0.97
LINC00449-201ENST00000366259 ATP10BO94823 1461 aa21.03■□□□□ 0.96
LINC00449-201ENST00000366259 CSRNP3Q8WYN3 585 aa21.02■□□□□ 0.96
LINC00449-201ENST00000366259 SAMD9Q5K651 1589 aa20.99■□□□□ 0.95
LINC00449-201ENST00000366259 FAM9AQ8IZU1 332 aaPredicted RBP20.98■□□□□ 0.95
LINC00449-201ENST00000366259 HECW2Q9P2P5 1572 aa20.97■□□□□ 0.95
LINC00449-201ENST00000366259 KIF21BO75037 1637 aa20.97■□□□□ 0.95
LINC00449-201ENST00000366259 RANGAP1P46060 587 aaPredicted RBP20.96■□□□□ 0.95
LINC00449-201ENST00000366259 RAPGEF6Q8TEU7 1601 aa20.96■□□□□ 0.95
LINC00449-201ENST00000366259 ABCA9Q8IUA7 1624 aa20.94■□□□□ 0.94
LINC00449-201ENST00000366259 ILDR1Q86SU0 546 aaPredicted RBP20.94■□□□□ 0.94
LINC00449-201ENST00000366259 ARAP3Q8WWN8 1544 aa20.94■□□□□ 0.94
LINC00449-201ENST00000366259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.91■□□□□ 0.94
LINC00449-201ENST00000366259 HNRNPUL2Q1KMD3 747 aaKnown RBP20.91■□□□□ 0.94
LINC00449-201ENST00000366259 FHOD3Q2V2M9 1422 aa20.87■□□□□ 0.93
LINC00449-201ENST00000366259 RAPGEF3O95398 923 aa20.87■□□□□ 0.93
LINC00449-201ENST00000366259 NUP153P49790 1475 aaKnown RBP20.87■□□□□ 0.93
LINC00449-201ENST00000366259 EEA1Q15075 1411 aa20.83■□□□□ 0.93
LINC00449-201ENST00000366259 PHLDB1Q86UU1 1377 aa20.83■□□□□ 0.92
LINC00449-201ENST00000366259 NEO1Q92859 1461 aa20.81■□□□□ 0.92
LINC00449-201ENST00000366259 FRMPD1Q5SYB0 1578 aa20.8■□□□□ 0.92
LINC00449-201ENST00000366259 ADAMTSL3P82987 1691 aa20.78■□□□□ 0.92
LINC00449-201ENST00000366259 PLEKHD1A6NEE1 506 aa20.76■□□□□ 0.91
LINC00449-201ENST00000366259 EHMT2Q96KQ7 1210 aa20.74■□□□□ 0.91
LINC00449-201ENST00000366259 PTPRMP28827 1452 aa20.74■□□□□ 0.91
LINC00449-201ENST00000366259 BCORL1Q5H9F3 1711 aa20.73■□□□□ 0.91
LINC00449-201ENST00000366259 ARID4BQ4LE39 1312 aaPredicted RBP20.73■□□□□ 0.91
LINC00449-201ENST00000366259 RICTORQ6R327 1708 aa20.73■□□□□ 0.91
LINC00449-201ENST00000366259 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.72■□□□□ 0.91
LINC00449-201ENST00000366259 EFCAB5A4FU69 1503 aa20.71■□□□□ 0.91
LINC00449-201ENST00000366259 TTC37Q6PGP7 1564 aa20.7■□□□□ 0.9
LINC00449-201ENST00000366259 MADDQ8WXG6 1647 aa20.7■□□□□ 0.9
LINC00449-201ENST00000366259 AKNAQ7Z591 1439 aa20.7■□□□□ 0.9
LINC00449-201ENST00000366259 CDK13Q14004 1512 aaKnown RBP20.69■□□□□ 0.9
LINC00449-201ENST00000366259 FANCAO15360 1455 aa20.69■□□□□ 0.9
LINC00449-201ENST00000366259 DENND4BO75064 1496 aaPredicted RBP20.69■□□□□ 0.9
LINC00449-201ENST00000366259 ARHGEF40Q8TER5 1519 aa20.66■□□□□ 0.9
LINC00449-201ENST00000366259 CFAP74Q9C0B2 1584 aa20.65■□□□□ 0.9
LINC00449-201ENST00000366259 RIMS1Q86UR5 1692 aaKnown RBP20.64■□□□□ 0.89
LINC00449-201ENST00000366259 UBTFP17480 764 aaKnown RBP20.63■□□□□ 0.89
LINC00449-201ENST00000366259 SIGLEC1Q9BZZ2 1709 aa20.63■□□□□ 0.89
LINC00449-201ENST00000366259 ATP1B4Q9UN42 357 aaPredicted RBP20.62■□□□□ 0.89
LINC00449-201ENST00000366259 YEATS2Q9ULM3 1422 aa20.6■□□□□ 0.89
LINC00449-201ENST00000366259 ZMYM4Q5VZL5 1548 aa20.58■□□□□ 0.89
LINC00449-201ENST00000366259 PLPPR3Q6T4P5 718 aa20.58■□□□□ 0.89
LINC00449-201ENST00000366259 PCF11O94913 1555 aaKnown RBP20.57■□□□□ 0.88
LINC00449-201ENST00000366259 ZFYVE16Q7Z3T8 1539 aa20.57■□□□□ 0.88
LINC00449-201ENST00000366259 HECW1Q76N89 1606 aa20.56■□□□□ 0.88
LINC00449-201ENST00000366259 ARHGAP35Q9NRY4 1499 aa20.56■□□□□ 0.88
LINC00449-201ENST00000366259 PLCH2O75038 1416 aa20.56■□□□□ 0.88
LINC00449-201ENST00000366259 LMTK3Q96Q04 1460 aa20.56■□□□□ 0.88
LINC00449-201ENST00000366259 SCAPERQ9BY12 1400 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms