RNA–Protein interactions for RNA: ENST00000365052.1

RNU1-43P-201, Transcript of RNA, U1 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU1-43P, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-43P-201ENST00000365052 CARMIL1Q5VZK9 1371 aa9.03□□□□□ -0.96
RNU1-43P-201ENST00000365052 RUSC2Q8N2Y8 1516 aa9.02□□□□□ -0.97
RNU1-43P-201ENST00000365052 SHROOM2Q13796 1616 aa8.99□□□□□ -0.97
RNU1-43P-201ENST00000365052 NPM1P06748 294 aaKnown RBP eCLIP8.99□□□□□ -0.97
RNU1-43P-201ENST00000365052 CUL7Q14999 1698 aa8.97□□□□□ -0.97
RNU1-43P-201ENST00000365052 KIAA0586Q9BVV6 1533 aa8.97□□□□□ -0.97
RNU1-43P-201ENST00000365052 FAM69CQ0P6D2 419 aa8.93□□□□□ -0.98
RNU1-43P-201ENST00000365052 FAM9AQ8IZU1 332 aaPredicted RBP8.93□□□□□ -0.98
RNU1-43P-201ENST00000365052 RAPGEF2Q9Y4G8 1499 aa8.93□□□□□ -0.98
RNU1-43P-201ENST00000365052 PTPRGP23470 1445 aa8.92□□□□□ -0.98
RNU1-43P-201ENST00000365052 CARMIL2Q6F5E8 1435 aa8.9□□□□□ -0.98
RNU1-43P-201ENST00000365052 EHMT2Q96KQ7 1210 aa8.9□□□□□ -0.98
RNU1-43P-201ENST00000365052 TNIKQ9UKE5 1360 aa8.89□□□□□ -0.99
RNU1-43P-201ENST00000365052 RANGAP1P46060 587 aaPredicted RBP8.89□□□□□ -0.99
RNU1-43P-201ENST00000365052 P3H3Q8IVL6 736 aa8.89□□□□□ -0.99
RNU1-43P-201ENST00000365052 CSRNP3Q8WYN3 585 aa8.89□□□□□ -0.99
RNU1-43P-201ENST00000365052 IQGAP2Q13576 1575 aa8.89□□□□□ -0.99
RNU1-43P-201ENST00000365052 ADCY10Q96PN6 1610 aa8.87□□□□□ -0.99
RNU1-43P-201ENST00000365052 KIF13AQ9H1H9 1805 aa8.86□□□□□ -0.99
RNU1-43P-201ENST00000365052 DISP1Q96F81 1524 aa8.85□□□□□ -0.99
RNU1-43P-201ENST00000365052 AEBP2Q6ZN18 517 aaPredicted RBP8.84□□□□□ -0.99
RNU1-43P-201ENST00000365052 ABCC10Q5T3U5 1492 aa8.83□□□□□ -1
RNU1-43P-201ENST00000365052 PRXQ9BXM0 1461 aa8.83□□□□□ -1
RNU1-43P-201ENST00000365052 UACAQ9BZF9 1416 aa8.83□□□□□ -1
RNU1-43P-201ENST00000365052 ARID3CA6NKF2 412 aa8.83□□□□□ -1
RNU1-43P-201ENST00000365052 CHIC1Q5VXU3 224 aa8.83□□□□□ -1
RNU1-43P-201ENST00000365052 TSPOAP1O95153 1857 aa8.83□□□□□ -1
RNU1-43P-201ENST00000365052 UGGT2Q9NYU1 1516 aa8.82□□□□□ -1
RNU1-43P-201ENST00000365052 CTTNBP2Q8WZ74 1663 aa8.81□□□□□ -1
RNU1-43P-201ENST00000365052 KCNH8Q96L42 1107 aa8.81□□□□□ -1
RNU1-43P-201ENST00000365052 ASXL2Q76L83 1435 aa8.8□□□□□ -1
RNU1-43P-201ENST00000365052 MAPKBP1O60336 1514 aa8.8□□□□□ -1
RNU1-43P-201ENST00000365052 ABCC2Q92887 1545 aa8.8□□□□□ -1
RNU1-43P-201ENST00000365052 KIAA0556O60303 1618 aa8.8□□□□□ -1
RNU1-43P-201ENST00000365052 DIP2BQ9P265 1576 aa8.8□□□□□ -1
RNU1-43P-201ENST00000365052 PLB1Q6P1J6 1458 aa8.78□□□□□ -1
RNU1-43P-201ENST00000365052 UHRF1BP1LA0JNW5 1464 aa8.77□□□□□ -1
RNU1-43P-201ENST00000365052 GOLGA3Q08378 1498 aa8.77□□□□□ -1
RNU1-43P-201ENST00000365052 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.77□□□□□ -1.01
RNU1-43P-201ENST00000365052 UBTFP17480 764 aaKnown RBP8.77□□□□□ -1.01
RNU1-43P-201ENST00000365052 HNRNPUL2Q1KMD3 747 aaKnown RBP8.77□□□□□ -1.01
RNU1-43P-201ENST00000365052 ZCCHC11Q5TAX3 1644 aaKnown RBP8.76□□□□□ -1.01
RNU1-43P-201ENST00000365052 KDM5BQ9UGL1 1544 aa8.75□□□□□ -1.01
RNU1-43P-201ENST00000365052 EEA1Q15075 1411 aa8.75□□□□□ -1.01
RNU1-43P-201ENST00000365052 ATP1B4Q9UN42 357 aaPredicted RBP8.73□□□□□ -1.01
RNU1-43P-201ENST00000365052 EPRSP07814 1512 aaKnown RBP8.73□□□□□ -1.01
RNU1-43P-201ENST00000365052 KDM6BO15054 1643 aa8.72□□□□□ -1.01
RNU1-43P-201ENST00000365052 ABCA8O94911 1581 aa8.72□□□□□ -1.01
RNU1-43P-201ENST00000365052 FHOD3Q2V2M9 1422 aa8.71□□□□□ -1.02
RNU1-43P-201ENST00000365052 ATP10BO94823 1461 aa8.7□□□□□ -1.02
RNU1-43P-201ENST00000365052 GLI2P10070 1586 aa8.7□□□□□ -1.02
RNU1-43P-201ENST00000365052 WDR7Q9Y4E6 1490 aa8.7□□□□□ -1.02
RNU1-43P-201ENST00000365052 PPRC1Q5VV67 1664 aaKnown RBP8.69□□□□□ -1.02
RNU1-43P-201ENST00000365052 CD109Q6YHK3 1445 aa8.69□□□□□ -1.02
RNU1-43P-201ENST00000365052 COL17A1Q9UMD9 1497 aaPredicted RBP8.68□□□□□ -1.02
RNU1-43P-201ENST00000365052 KDM4FA0A1W2PPD8 638 aa8.67□□□□□ -1.02
RNU1-43P-201ENST00000365052 PLEKHD1A6NEE1 506 aa8.67□□□□□ -1.02
RNU1-43P-201ENST00000365052 SAMD9Q5K651 1589 aa8.67□□□□□ -1.02
RNU1-43P-201ENST00000365052 KIF21BO75037 1637 aa8.66□□□□□ -1.02
RNU1-43P-201ENST00000365052 RAPGEF6Q8TEU7 1601 aa8.66□□□□□ -1.02
RNU1-43P-201ENST00000365052 MAP3K4Q9Y6R4 1608 aa8.66□□□□□ -1.02
RNU1-43P-201ENST00000365052 TEX14Q8IWB6 1497 aa8.64□□□□□ -1.03
RNU1-43P-201ENST00000365052 NUP153P49790 1475 aaKnown RBP8.63□□□□□ -1.03
RNU1-43P-201ENST00000365052 CFAP43Q8NDM7 1665 aa8.62□□□□□ -1.03
RNU1-43P-201ENST00000365052 RAPGEF3O95398 923 aa8.62□□□□□ -1.03
RNU1-43P-201ENST00000365052 MAGI3Q5TCQ9 1506 aa8.61□□□□□ -1.03
RNU1-43P-201ENST00000365052 ARHGAP35Q9NRY4 1499 aa8.6□□□□□ -1.03
RNU1-43P-201ENST00000365052 EFCAB5A4FU69 1503 aa8.59□□□□□ -1.03
RNU1-43P-201ENST00000365052 CDK13Q14004 1512 aaKnown RBP8.59□□□□□ -1.03
RNU1-43P-201ENST00000365052 CDK11AQ9UQ88 783 aaPredicted RBP8.57□□□□□ -1.04
RNU1-43P-201ENST00000365052 ABCA9Q8IUA7 1624 aa8.57□□□□□ -1.04
RNU1-43P-201ENST00000365052 FMN1Q68DA7 1419 aa8.56□□□□□ -1.04
RNU1-43P-201ENST00000365052 ADGRL1O94910 1474 aa8.56□□□□□ -1.04
RNU1-43P-201ENST00000365052 ARID4BQ4LE39 1312 aaPredicted RBP8.55□□□□□ -1.04
RNU1-43P-201ENST00000365052 LOC105371045A0A1W2PR82 267 aa8.55□□□□□ -1.04
RNU1-43P-201ENST00000365052 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.54□□□□□ -1.04
RNU1-43P-201ENST00000365052 ARAP3Q8WWN8 1544 aa8.54□□□□□ -1.04
RNU1-43P-201ENST00000365052 AKNAQ7Z591 1439 aa8.54□□□□□ -1.04
RNU1-43P-201ENST00000365052 PHLDB1Q86UU1 1377 aa8.53□□□□□ -1.04
RNU1-43P-201ENST00000365052 PLPPR3Q6T4P5 718 aa8.53□□□□□ -1.04
RNU1-43P-201ENST00000365052 MYT1LQ9UL68 1186 aa8.53□□□□□ -1.04
RNU1-43P-201ENST00000365052 NEO1Q92859 1461 aa8.52□□□□□ -1.05
RNU1-43P-201ENST00000365052 HECW1Q76N89 1606 aa8.52□□□□□ -1.05
RNU1-43P-201ENST00000365052 EFCAB2Q5VUJ9 269 aa8.52□□□□□ -1.05
RNU1-43P-201ENST00000365052 TTC37Q6PGP7 1564 aa8.52□□□□□ -1.05
RNU1-43P-201ENST00000365052 FANCAO15360 1455 aa8.51□□□□□ -1.05
RNU1-43P-201ENST00000365052 MLECQ14165 292 aa8.51□□□□□ -1.05
RNU1-43P-201ENST00000365052 CLIP1P30622 1438 aa8.51□□□□□ -1.05
RNU1-43P-201ENST00000365052 LRRIQ1Q96JM4 1722 aa8.51□□□□□ -1.05
RNU1-43P-201ENST00000365052 DENND4BO75064 1496 aaPredicted RBP8.51□□□□□ -1.05
RNU1-43P-201ENST00000365052 PLCH2O75038 1416 aa8.5□□□□□ -1.05
RNU1-43P-201ENST00000365052 SCAPERQ9BY12 1400 aa8.5□□□□□ -1.05
RNU1-43P-201ENST00000365052 ZNF777Q9ULD5 760 aaPredicted RBP8.5□□□□□ -1.05
RNU1-43P-201ENST00000365052 TROQ12816 1431 aaPredicted RBP8.49□□□□□ -1.05
RNU1-43P-201ENST00000365052 AFAP1Q8N556 730 aa8.49□□□□□ -1.05
RNU1-43P-201ENST00000365052 CASKIN1Q8WXD9 1431 aa8.48□□□□□ -1.05
RNU1-43P-201ENST00000365052 KIF14Q15058 1648 aa8.48□□□□□ -1.05
RNU1-43P-201ENST00000365052 PCF11O94913 1555 aaKnown RBP8.48□□□□□ -1.05
RNU1-43P-201ENST00000365052 FRMPD1Q5SYB0 1578 aa8.48□□□□□ -1.05
RNU1-43P-201ENST00000365052 YEATS2Q9ULM3 1422 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms