RNA–Protein interactions for RNA: ENST00000361420.7

IGSF1-201, Transcript of immunoglobulin superfamily member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IGSF1, Length 4,378 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGSF1-201ENST00000361420 SMARCA4P51532 1647 aa14□□□□□ -0.17
IGSF1-201ENST00000361420 KANK4Q5T7N3 995 aaPredicted RBP13.96□□□□□ -0.17
IGSF1-201ENST00000361420 ATAD2BQ9ULI0 1458 aa13.96□□□□□ -0.17
IGSF1-201ENST00000361420 SIN3AQ96ST3 1273 aa13.95□□□□□ -0.18
IGSF1-201ENST00000361420 MRS2Q9HD23 443 aa13.94□□□□□ -0.18
IGSF1-201ENST00000361420 PLEKHD1A6NEE1 506 aa13.94□□□□□ -0.18
IGSF1-201ENST00000361420 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.93□□□□□ -0.183e-7■■□□□ 11.8
IGSF1-201ENST00000361420 TMC1Q8TDI8 760 aa13.92□□□□□ -0.18
IGSF1-201ENST00000361420 KDM2AQ9Y2K7 1162 aa13.92□□□□□ -0.18
IGSF1-201ENST00000361420 TIMELESSQ9UNS1 1208 aa13.91□□□□□ -0.18
IGSF1-201ENST00000361420 CFDP1Q9UEE9 299 aaPredicted RBP13.9□□□□□ -0.18
IGSF1-201ENST00000361420 RUSC2Q8N2Y8 1516 aa13.9□□□□□ -0.18
IGSF1-201ENST00000361420 RAPGEF2Q9Y4G8 1499 aa13.88□□□□□ -0.19
IGSF1-201ENST00000361420 CANXP27824 592 aaKnown RBP13.87□□□□□ -0.19
IGSF1-201ENST00000361420 SETD5Q9C0A6 1442 aa13.87□□□□□ -0.19
IGSF1-201ENST00000361420 NPM1P06748 294 aaKnown RBP eCLIP13.87□□□□□ -0.19
IGSF1-201ENST00000361420 CADPSQ9ULU8 1353 aa13.85□□□□□ -0.19
IGSF1-201ENST00000361420 ANP32AP39687 249 aaKnown RBP13.85□□□□□ -0.19
IGSF1-201ENST00000361420 CHGAP10645 457 aaKnown RBP13.85□□□□□ -0.19
IGSF1-201ENST00000361420 SALL2Q9Y467 1007 aaPredicted RBP13.82□□□□□ -0.2
IGSF1-201ENST00000361420 NEFMP07197 916 aa13.82□□□□□ -0.2
IGSF1-201ENST00000361420 ARHGAP35Q9NRY4 1499 aa13.81□□□□□ -0.2
IGSF1-201ENST00000361420 CCDC136Q96JN2 1154 aa13.8□□□□□ -0.2
IGSF1-201ENST00000361420 RAB3GAP2Q9H2M9 1393 aa13.8□□□□□ -0.2
IGSF1-201ENST00000361420 FMN1Q68DA7 1419 aa13.79□□□□□ -0.2
IGSF1-201ENST00000361420 KCNH8Q96L42 1107 aa13.78□□□□□ -0.2
IGSF1-201ENST00000361420 PDS5BQ9NTI5 1447 aa13.78□□□□□ -0.2
IGSF1-201ENST00000361420 TDRD9Q8NDG6 1382 aaKnown RBP13.78□□□□□ -0.2
IGSF1-201ENST00000361420 EIF4G1Q04637 1599 aaKnown RBP13.78□□□□□ -0.2
IGSF1-201ENST00000361420 IRX6P78412 446 aaPredicted RBP13.77□□□□□ -0.21
IGSF1-201ENST00000361420 ZBTB47Q9UFB7 747 aaPredicted RBP13.76□□□□□ -0.21
IGSF1-201ENST00000361420 RGL3Q3MIN7 710 aa13.75□□□□□ -0.21
IGSF1-201ENST00000361420 WDR43Q15061 677 aaKnown RBP eCLIP13.74□□□□□ -0.21
IGSF1-201ENST00000361420 NPM2Q86SE8 214 aaKnown RBP13.74□□□□□ -0.21
IGSF1-201ENST00000361420 CARD11Q9BXL7 1154 aa13.74□□□□□ -0.21
IGSF1-201ENST00000361420 ERCC6Q03468 1493 aa13.73□□□□□ -0.21
IGSF1-201ENST00000361420 STAG3Q9UJ98 1225 aa13.72□□□□□ -0.21
IGSF1-201ENST00000361420 CCER2I3L3R5 266 aa13.71□□□□□ -0.21
IGSF1-201ENST00000361420 SUPT16HQ9Y5B9 1047 aaKnown RBP13.71□□□□□ -0.21
IGSF1-201ENST00000361420 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.7□□□□□ -0.22
IGSF1-201ENST00000361420 ESF1Q9H501 851 aaKnown RBP13.7□□□□□ -0.22
IGSF1-201ENST00000361420 FHOD3Q2V2M9 1422 aa13.7□□□□□ -0.22
IGSF1-201ENST00000361420 PPP1R15AO75807 674 aaPredicted RBP13.69□□□□□ -0.22
IGSF1-201ENST00000361420 DHX57Q6P158 1386 aaKnown RBP13.68□□□□□ -0.22
IGSF1-201ENST00000361420 HSPA5P11021 654 aaKnown RBP13.65□□□□□ -0.22
IGSF1-201ENST00000361420 CDCA8Q53HL2 280 aa13.64□□□□□ -0.23
IGSF1-201ENST00000361420 IGF1RP08069 1367 aa13.64□□□□□ -0.23
IGSF1-201ENST00000361420 NCAPD3P42695 1498 aa13.64□□□□□ -0.23
IGSF1-201ENST00000361420 MPHOSPH9Q99550 1183 aa13.64□□□□□ -0.23
IGSF1-201ENST00000361420 FANCD2Q9BXW9 1451 aa13.64□□□□□ -0.23
IGSF1-201ENST00000361420 CARMIL2Q6F5E8 1435 aa13.61□□□□□ -0.23
IGSF1-201ENST00000361420 BCL11AQ9H165 835 aa13.61□□□□□ -0.23
IGSF1-201ENST00000361420 KNSTRNQ9Y448 316 aa13.61□□□□□ -0.23
IGSF1-201ENST00000361420 FOXD1Q16676 465 aa13.6□□□□□ -0.23
IGSF1-201ENST00000361420 DCAF11Q8TEB1 546 aa13.6□□□□□ -0.23
IGSF1-201ENST00000361420 PKD2Q13563 968 aa13.6□□□□□ -0.23
IGSF1-201ENST00000361420 PPP4R2Q9NY27 417 aa13.59□□□□□ -0.23
IGSF1-201ENST00000361420 SLC24A1O60721 1099 aa13.59□□□□□ -0.23
IGSF1-201ENST00000361420 UPF2Q9HAU5 1272 aaKnown RBP13.58□□□□□ -0.23
IGSF1-201ENST00000361420 KIF21BO75037 1637 aa13.58□□□□□ -0.24
IGSF1-201ENST00000361420 SENP3-EIF4A1A0A087X0R7 540 aa13.58□□□□□ -0.24
IGSF1-201ENST00000361420 FGD5Q6ZNL6 1462 aa13.57□□□□□ -0.24
IGSF1-201ENST00000361420 L3MBTL2Q969R5 705 aa13.54□□□□□ -0.24
IGSF1-201ENST00000361420 SYNJ1O43426 1573 aa13.54□□□□□ -0.24
IGSF1-201ENST00000361420 ANKRD30AQ9BXX3 1397 aa13.54□□□□□ -0.24
IGSF1-201ENST00000361420 CCDC18Q5T9S5 1454 aa13.53□□□□□ -0.24
IGSF1-201ENST00000361420 TMF1P82094 1093 aa13.52□□□□□ -0.25
IGSF1-201ENST00000361420 NUP155O75694 1391 aa13.52□□□□□ -0.25
IGSF1-201ENST00000361420 ERICH3Q5RHP9 1530 aa13.51□□□□□ -0.25
IGSF1-201ENST00000361420 NBR1Q14596 966 aa13.5□□□□□ -0.25
IGSF1-201ENST00000361420 CFTRP13569 1480 aa13.5□□□□□ -0.25
IGSF1-201ENST00000361420 CFAP53Q96M91 514 aa13.49□□□□□ -0.25
IGSF1-201ENST00000361420 RAD54L2Q9Y4B4 1467 aa13.49□□□□□ -0.25
IGSF1-201ENST00000361420 CC2D1BQ5T0F9 858 aaKnown RBP13.49□□□□□ -0.25
IGSF1-201ENST00000361420 JPH4Q96JJ6 628 aa13.48□□□□□ -0.25
IGSF1-201ENST00000361420 B4GALNT3Q6L9W6 998 aa13.47□□□□□ -0.25
IGSF1-201ENST00000361420 ANP32EQ9BTT0 268 aa13.47□□□□□ -0.25
IGSF1-201ENST00000361420 GAPVD1Q14C86 1478 aa13.47□□□□□ -0.25
IGSF1-201ENST00000361420 PRXQ9BXM0 1461 aa13.47□□□□□ -0.25
IGSF1-201ENST00000361420 ARAP1Q96P48 1450 aa13.46□□□□□ -0.25
IGSF1-201ENST00000361420 RSPH4AQ5TD94 716 aa13.46□□□□□ -0.26
IGSF1-201ENST00000361420 ERICH6BQ5W0A0 696 aa13.46□□□□□ -0.26
IGSF1-201ENST00000361420 KANK1Q14678 1352 aa13.45□□□□□ -0.26
IGSF1-201ENST00000361420 LRRC9Q6ZRR7 1453 aa13.45□□□□□ -0.26
IGSF1-201ENST00000361420 PHLDB1Q86UU1 1377 aa13.45□□□□□ -0.26
IGSF1-201ENST00000361420 HSP90AA1P07900 732 aaKnown RBP13.45□□□□□ -0.26
IGSF1-201ENST00000361420 EFCAB2Q5VUJ9 269 aa13.45□□□□□ -0.26
IGSF1-201ENST00000361420 SENP3Q9H4L4 574 aaPredicted RBP13.44□□□□□ -0.26
IGSF1-201ENST00000361420 TOP2BQ02880 1626 aa13.44□□□□□ -0.26
IGSF1-201ENST00000361420 PLPPR3Q6T4P5 718 aa13.43□□□□□ -0.26
IGSF1-201ENST00000361420 HNRNPMP52272 730 aaKnown RBP eCLIP13.43□□□□□ -0.26
IGSF1-201ENST00000361420 FGD6Q6ZV73 1430 aa13.42□□□□□ -0.26
IGSF1-201ENST00000361420 DDRGK1Q96HY6 314 aa13.42□□□□□ -0.26
IGSF1-201ENST00000361420 RRBP1Q9P2E9 1410 aaKnown RBP13.42□□□□□ -0.26
IGSF1-201ENST00000361420 ROCK2O75116 1388 aaKnown RBP13.41□□□□□ -0.26
IGSF1-201ENST00000361420 RALBP1Q15311 655 aa13.41□□□□□ -0.26
IGSF1-201ENST00000361420 KTN1Q86UP2 1357 aaKnown RBP13.4□□□□□ -0.26
IGSF1-201ENST00000361420 HMGXB3Q12766 1538 aa13.4□□□□□ -0.26
IGSF1-201ENST00000361420 CASKIN1Q8WXD9 1431 aa13.4□□□□□ -0.26
IGSF1-201ENST00000361420 NEUROD2Q15784 382 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms