RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 JPH4Q96JJ6 628 aa4.44□□□□□ -1.7
LTN1-201ENST00000361371 GRIN2BQ13224 1484 aa4.44□□□□□ -1.7
LTN1-201ENST00000361371 FHAD1B1AJZ9 1412 aa4.44□□□□□ -1.7
LTN1-201ENST00000361371 APLP2Q06481 763 aa4.44□□□□□ -1.7
LTN1-201ENST00000361371 WDR62O43379 1518 aa4.44□□□□□ -1.7
LTN1-201ENST00000361371 TARBP1Q13395 1621 aaKnown RBP4.44□□□□□ -1.7
LTN1-201ENST00000361371 ERICH3Q5RHP9 1530 aa4.43□□□□□ -1.7
LTN1-201ENST00000361371 HRCP23327 699 aa4.41□□□□□ -1.7
LTN1-201ENST00000361371 THOC2Q8NI27 1593 aaKnown RBP4.41□□□□□ -1.7
LTN1-201ENST00000361371 PHLDB1Q86UU1 1377 aa4.4□□□□□ -1.7
LTN1-201ENST00000361371 ABCA5Q8WWZ7 1642 aa4.4□□□□□ -1.71
LTN1-201ENST00000361371 GRIN2AQ12879 1464 aa4.4□□□□□ -1.71
LTN1-201ENST00000361371 KIAA0586Q9BVV6 1533 aa4.38□□□□□ -1.71
LTN1-201ENST00000361371 ZNF644Q9H582 1327 aaPredicted RBP4.38□□□□□ -1.71
LTN1-201ENST00000361371 FAM50AQ14320 339 aaKnown RBP4.38□□□□□ -1.71
LTN1-201ENST00000361371 DISP1Q96F81 1524 aa4.38□□□□□ -1.71
LTN1-201ENST00000361371 PLB1Q6P1J6 1458 aa4.38□□□□□ -1.71
LTN1-201ENST00000361371 EIF4G3O43432 1585 aaKnown RBP4.37□□□□□ -1.71
LTN1-201ENST00000361371 SYNJ2O15056 1496 aa4.37□□□□□ -1.71
LTN1-201ENST00000361371 NUP160Q12769 1436 aa4.37□□□□□ -1.71
LTN1-201ENST00000361371 PRG4Q92954 1404 aaPredicted RBP4.37□□□□□ -1.71
LTN1-201ENST00000361371 CHIC2Q9UKJ5 165 aa4.37□□□□□ -1.71
LTN1-201ENST00000361371 ADAMTS12P58397 1594 aa4.37□□□□□ -1.71
LTN1-201ENST00000361371 CCER1Q8TC90 406 aaPredicted RBP4.36□□□□□ -1.71
LTN1-201ENST00000361371 MTUS2Q5JR59 1369 aa4.35□□□□□ -1.71
LTN1-201ENST00000361371 MAGI1Q96QZ7 1491 aaPredicted RBP4.35□□□□□ -1.71
LTN1-201ENST00000361371 KCNH8Q96L42 1107 aa4.35□□□□□ -1.71
LTN1-201ENST00000361371 CASKIN1Q8WXD9 1431 aa4.35□□□□□ -1.71
LTN1-201ENST00000361371 ERCC6L2Q5T890 1561 aa4.35□□□□□ -1.71
LTN1-201ENST00000361371 PTPRGP23470 1445 aa4.35□□□□□ -1.71
LTN1-201ENST00000361371 CDK13Q14004 1512 aaKnown RBP4.35□□□□□ -1.71
LTN1-201ENST00000361371 ZNF777Q9ULD5 760 aaPredicted RBP4.35□□□□□ -1.71
LTN1-201ENST00000361371 WDR97A6NE52 1622 aa4.34□□□□□ -1.71
LTN1-201ENST00000361371 CEP170Q5SW79 1584 aa4.34□□□□□ -1.71
LTN1-201ENST00000361371 PTPRKQ15262 1439 aa4.34□□□□□ -1.71
LTN1-201ENST00000361371 LRRC9Q6ZRR7 1453 aa4.34□□□□□ -1.71
LTN1-201ENST00000361371 FMN1Q68DA7 1419 aa4.34□□□□□ -1.71
LTN1-201ENST00000361371 MAGI3Q5TCQ9 1506 aa4.34□□□□□ -1.71
LTN1-201ENST00000361371 OSCARQ8IYS5 282 aa4.34□□□□□ -1.72
LTN1-201ENST00000361371 CCNB3Q8WWL7 1395 aa4.33□□□□□ -1.72
LTN1-201ENST00000361371 RRP7BPQ9NSQ0 103 aa4.33□□□□□ -1.72
LTN1-201ENST00000361371 NUP153P49790 1475 aaKnown RBP4.33□□□□□ -1.72
LTN1-201ENST00000361371 PCF11O94913 1555 aaKnown RBP4.33□□□□□ -1.72
LTN1-201ENST00000361371 IQGAP2Q13576 1575 aa4.32□□□□□ -1.72
LTN1-201ENST00000361371 CYB5RLQ6IPT4 315 aa4.32□□□□□ -1.72
LTN1-201ENST00000361371 PLEKHD1A6NEE1 506 aa4.31□□□□□ -1.72
LTN1-201ENST00000361371 SIN3AQ96ST3 1273 aa4.31□□□□□ -1.72
LTN1-201ENST00000361371 UGGT2Q9NYU1 1516 aa4.31□□□□□ -1.72
LTN1-201ENST00000361371 CARMIL2Q6F5E8 1435 aa4.31□□□□□ -1.72
LTN1-201ENST00000361371 RRBP1Q9P2E9 1410 aaKnown RBP4.31□□□□□ -1.72
LTN1-201ENST00000361371 EPRSP07814 1512 aaKnown RBP4.31□□□□□ -1.72
LTN1-201ENST00000361371 PRDM2Q13029 1718 aa4.31□□□□□ -1.72
LTN1-201ENST00000361371 CUL7Q14999 1698 aa4.31□□□□□ -1.72
LTN1-201ENST00000361371 NCOA2Q15596 1464 aa4.31□□□□□ -1.72
LTN1-201ENST00000361371 ATP10BO94823 1461 aa4.3□□□□□ -1.72
LTN1-201ENST00000361371 TIAM1Q13009 1591 aa4.3□□□□□ -1.72
LTN1-201ENST00000361371 EFCAB5A4FU69 1503 aa4.3□□□□□ -1.72
LTN1-201ENST00000361371 FYCO1Q9BQS8 1478 aa4.3□□□□□ -1.72
LTN1-201ENST00000361371 CFDP1Q9UEE9 299 aaPredicted RBP4.3□□□□□ -1.72
LTN1-201ENST00000361371 HNRNPMP52272 730 aaKnown RBP eCLIP4.3□□□□□ -1.72
LTN1-201ENST00000361371 FGD6Q6ZV73 1430 aa4.29□□□□□ -1.72
LTN1-201ENST00000361371 SAMD9Q5K651 1589 aa4.29□□□□□ -1.72
LTN1-201ENST00000361371 FOXD1Q16676 465 aa4.29□□□□□ -1.72
LTN1-201ENST00000361371 RAB3GAP2Q9H2M9 1393 aa4.29□□□□□ -1.72
LTN1-201ENST00000361371 DHX57Q6P158 1386 aaKnown RBP4.29□□□□□ -1.72
LTN1-201ENST00000361371 UACAQ9BZF9 1416 aa4.29□□□□□ -1.72
LTN1-201ENST00000361371 KIAA0556O60303 1618 aa4.28□□□□□ -1.72
LTN1-201ENST00000361371 CDK11AQ9UQ88 783 aaPredicted RBP4.28□□□□□ -1.72
LTN1-201ENST00000361371 MYOM3Q5VTT5 1437 aa4.28□□□□□ -1.72
LTN1-201ENST00000361371 NEUROD1Q13562 356 aa4.27□□□□□ -1.73
LTN1-201ENST00000361371 TROQ12816 1431 aaPredicted RBP4.27□□□□□ -1.73
LTN1-201ENST00000361371 AFAP1Q8N556 730 aa4.27□□□□□ -1.73
LTN1-201ENST00000361371 PBRM1Q86U86 1689 aa4.27□□□□□ -1.73
LTN1-201ENST00000361371 MAP3K1Q13233 1512 aa4.26□□□□□ -1.73
LTN1-201ENST00000361371 TRIM52Q96A61 297 aa4.26□□□□□ -1.73
LTN1-201ENST00000361371 ARHGEF11O15085 1522 aa4.26□□□□□ -1.73
LTN1-201ENST00000361371 GPATCH8Q9UKJ3 1502 aaKnown RBP4.25□□□□□ -1.73
LTN1-201ENST00000361371 HIRIP3Q9BW71 556 aaPredicted RBP4.25□□□□□ -1.73
LTN1-201ENST00000361371 ABCC5O15440 1437 aa4.25□□□□□ -1.73
LTN1-201ENST00000361371 SETD5Q9C0A6 1442 aa4.25□□□□□ -1.73
LTN1-201ENST00000361371 NAIPQ13075 1403 aa4.24□□□□□ -1.73
LTN1-201ENST00000361371 CLASP1Q7Z460 1538 aa4.24□□□□□ -1.73
LTN1-201ENST00000361371 ABCA8O94911 1581 aa4.23□□□□□ -1.73
LTN1-201ENST00000361371 ABCC10Q5T3U5 1492 aa4.23□□□□□ -1.73
LTN1-201ENST00000361371 CCDC18Q5T9S5 1454 aa4.22□□□□□ -1.73
LTN1-201ENST00000361371 RAPGEF3O95398 923 aa4.22□□□□□ -1.73
LTN1-201ENST00000361371 NPM1P06748 294 aaKnown RBP eCLIP4.22□□□□□ -1.73
LTN1-201ENST00000361371 ARHGEF12Q9NZN5 1544 aa4.22□□□□□ -1.73
LTN1-201ENST00000361371 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.22□□□□□ -1.731e-7■■■■□ 24.4
LTN1-201ENST00000361371 TSPY4P0CV99 314 aa4.22□□□□□ -1.73
LTN1-201ENST00000361371 TSPY10P0CW01 314 aa4.22□□□□□ -1.73
LTN1-201ENST00000361371 DENND4BO75064 1496 aaPredicted RBP4.22□□□□□ -1.73
LTN1-201ENST00000361371 MPHOSPH9Q99550 1183 aa4.22□□□□□ -1.73
LTN1-201ENST00000361371 EFCAB2Q5VUJ9 269 aa4.21□□□□□ -1.73
LTN1-201ENST00000361371 ZEB1P37275 1124 aaPredicted RBP4.21□□□□□ -1.74
LTN1-201ENST00000361371 EHBP1L1Q8N3D4 1523 aa4.21□□□□□ -1.74
LTN1-201ENST00000361371 DAPK1P53355 1430 aa4.21□□□□□ -1.74
LTN1-201ENST00000361371 MIA2Q96PC5 1412 aa4.21□□□□□ -1.74
LTN1-201ENST00000361371 TRAPPC8Q9Y2L5 1435 aa4.21□□□□□ -1.74
LTN1-201ENST00000361371 MBD5Q9P267 1494 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms