RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 CCER1Q8TC90 406 aaPredicted RBP27.77■■■□□ 2.04
PDLIM7-203ENST00000359895 PBRM1Q86U86 1689 aa27.77■■■□□ 2.04
PDLIM7-203ENST00000359895 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.76■■■□□ 2.03
PDLIM7-203ENST00000359895 FHAD1B1AJZ9 1412 aa27.75■■■□□ 2.03
PDLIM7-203ENST00000359895 TIAM1Q13009 1591 aa27.69■■■□□ 2.02
PDLIM7-203ENST00000359895 KANK4Q5T7N3 995 aaPredicted RBP27.65■■■□□ 2.02
PDLIM7-203ENST00000359895 CFAP43Q8NDM7 1665 aa27.65■■■□□ 2.02
PDLIM7-203ENST00000359895 IFT140Q96RY7 1462 aa27.64■■■□□ 2.02
PDLIM7-203ENST00000359895 PCF11O94913 1555 aaKnown RBP27.62■■■□□ 2.01
PDLIM7-203ENST00000359895 AQRO60306 1485 aaKnown RBP eCLIP27.61■■■□□ 2.016e-8■■■■■ 29.2
PDLIM7-203ENST00000359895 RRBP1Q9P2E9 1410 aaKnown RBP27.6■■■□□ 2.01
PDLIM7-203ENST00000359895 SAMD9Q5K651 1589 aa27.6■■■□□ 2.01
PDLIM7-203ENST00000359895 FYCO1Q9BQS8 1478 aa27.58■■■□□ 2.01
PDLIM7-203ENST00000359895 ADAMTS12P58397 1594 aa27.58■■■□□ 2.01
PDLIM7-203ENST00000359895 HNRNPUL2Q1KMD3 747 aaKnown RBP27.57■■■□□ 2
PDLIM7-203ENST00000359895 GRIN2BQ13224 1484 aa27.56■■■□□ 2
PDLIM7-203ENST00000359895 FHOD3Q2V2M9 1422 aa27.55■■■□□ 2
PDLIM7-203ENST00000359895 FMN1Q68DA7 1419 aa27.54■■■□□ 2
PDLIM7-203ENST00000359895 CASKIN1Q8WXD9 1431 aa27.54■■■□□ 2
PDLIM7-203ENST00000359895 DNAJC5Q9H3Z4 198 aa27.53■■■□□ 2
PDLIM7-203ENST00000359895 LRRC9Q6ZRR7 1453 aa27.53■■■□□ 2
PDLIM7-203ENST00000359895 ZNF608Q9ULD9 1512 aaPredicted RBP27.53■■■□□ 2
PDLIM7-203ENST00000359895 P3H3Q8IVL6 736 aa27.49■■□□□ 1.99
PDLIM7-203ENST00000359895 EIF4G3O43432 1585 aaKnown RBP27.47■■□□□ 1.99
PDLIM7-203ENST00000359895 CCNB3Q8WWL7 1395 aa27.44■■□□□ 1.98
PDLIM7-203ENST00000359895 IQGAP2Q13576 1575 aa27.43■■□□□ 1.98
PDLIM7-203ENST00000359895 SNAPC4Q5SXM2 1469 aa27.41■■□□□ 1.98
PDLIM7-203ENST00000359895 ATP1B4Q9UN42 357 aaPredicted RBP27.31■■□□□ 1.96
PDLIM7-203ENST00000359895 LRRIQ1Q96JM4 1722 aa27.3■■□□□ 1.96
PDLIM7-203ENST00000359895 UGGT2Q9NYU1 1516 aa27.29■■□□□ 1.96
PDLIM7-203ENST00000359895 MAGI1Q96QZ7 1491 aaPredicted RBP27.28■■□□□ 1.96
PDLIM7-203ENST00000359895 PHLDB1Q86UU1 1377 aa27.26■■□□□ 1.96
PDLIM7-203ENST00000359895 CLSPNQ9HAW4 1339 aa27.25■■□□□ 1.95
PDLIM7-203ENST00000359895 KIAA0586Q9BVV6 1533 aa27.24■■□□□ 1.95
PDLIM7-203ENST00000359895 GRIN2AQ12879 1464 aa27.23■■□□□ 1.95
PDLIM7-203ENST00000359895 HECW1Q76N89 1606 aa27.23■■□□□ 1.95
PDLIM7-203ENST00000359895 CCDC18Q5T9S5 1454 aa27.21■■□□□ 1.95
PDLIM7-203ENST00000359895 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.19■■□□□ 1.944e-6■■■□□ 19.1
PDLIM7-203ENST00000359895 EHBP1L1Q8N3D4 1523 aa27.17■■□□□ 1.94
PDLIM7-203ENST00000359895 MTUS2Q5JR59 1369 aa27.17■■□□□ 1.94
PDLIM7-203ENST00000359895 SUPT6HQ7KZ85 1726 aaKnown RBP27.16■■□□□ 1.94
PDLIM7-203ENST00000359895 SYNJ2O15056 1496 aa27.16■■□□□ 1.94
PDLIM7-203ENST00000359895 DHX57Q6P158 1386 aaKnown RBP27.15■■□□□ 1.94
PDLIM7-203ENST00000359895 KIAA0556O60303 1618 aa27.13■■□□□ 1.93
PDLIM7-203ENST00000359895 CHD1O14646 1710 aa27.11■■□□□ 1.93
PDLIM7-203ENST00000359895 FGD6Q6ZV73 1430 aa27.07■■□□□ 1.92
PDLIM7-203ENST00000359895 ITGAEP38570 1179 aa27.07■■□□□ 1.92
PDLIM7-203ENST00000359895 FAM50AQ14320 339 aaKnown RBP27.06■■□□□ 1.92
PDLIM7-203ENST00000359895 DISP1Q96F81 1524 aa27.06■■□□□ 1.92
PDLIM7-203ENST00000359895 NCOA2Q15596 1464 aa27.05■■□□□ 1.92
PDLIM7-203ENST00000359895 CEP170Q5SW79 1584 aa27.05■■□□□ 1.92
PDLIM7-203ENST00000359895 SETD5Q9C0A6 1442 aa27.05■■□□□ 1.92
PDLIM7-203ENST00000359895 EPRSP07814 1512 aaKnown RBP27.05■■□□□ 1.92
PDLIM7-203ENST00000359895 CHMP7Q8WUX9 453 aaPredicted RBP27.03■■□□□ 1.92
PDLIM7-203ENST00000359895 ARHGEF11O15085 1522 aa27.02■■□□□ 1.92
PDLIM7-203ENST00000359895 MYOM3Q5VTT5 1437 aa27.01■■□□□ 1.91
PDLIM7-203ENST00000359895 RAB3GAP2Q9H2M9 1393 aa27.01■■□□□ 1.91
PDLIM7-203ENST00000359895 NUP160Q12769 1436 aa27■■□□□ 1.91
PDLIM7-203ENST00000359895 MAGI3Q5TCQ9 1506 aa26.98■■□□□ 1.91
PDLIM7-203ENST00000359895 RAPGEF6Q8TEU7 1601 aa26.97■■□□□ 1.91
PDLIM7-203ENST00000359895 FBLN2P98095 1184 aa26.97■■□□□ 1.91
PDLIM7-203ENST00000359895 ZNF316A6NFI3 1004 aaPredicted RBP26.92■■□□□ 1.9
PDLIM7-203ENST00000359895 PTPN23Q9H3S7 1636 aa26.92■■□□□ 1.9
PDLIM7-203ENST00000359895 CDK13Q14004 1512 aaKnown RBP26.92■■□□□ 1.9
PDLIM7-203ENST00000359895 CARMIL2Q6F5E8 1435 aa26.89■■□□□ 1.9
PDLIM7-203ENST00000359895 OSCARQ8IYS5 282 aa26.88■■□□□ 1.89
PDLIM7-203ENST00000359895 TCOF1Q13428 1488 aaKnown RBP26.86■■□□□ 1.89
PDLIM7-203ENST00000359895 NUP153P49790 1475 aaKnown RBP26.85■■□□□ 1.89
PDLIM7-203ENST00000359895 DIEXFQ68CQ4 756 aaKnown RBP26.83■■□□□ 1.89
PDLIM7-203ENST00000359895 MAPKBP1O60336 1514 aa26.82■■□□□ 1.88
PDLIM7-203ENST00000359895 MIA2Q96PC5 1412 aa26.82■■□□□ 1.88
PDLIM7-203ENST00000359895 JPH4Q96JJ6 628 aa26.8■■□□□ 1.88
PDLIM7-203ENST00000359895 HFM1A2PYH4 1435 aa26.79■■□□□ 1.88
PDLIM7-203ENST00000359895 CDK11AQ9UQ88 783 aaPredicted RBP26.77■■□□□ 1.88
PDLIM7-203ENST00000359895 PTPRKQ15262 1439 aa26.73■■□□□ 1.87
PDLIM7-203ENST00000359895 CLASP1Q7Z460 1538 aa26.73■■□□□ 1.87
PDLIM7-203ENST00000359895 GCC2Q8IWJ2 1684 aa26.71■■□□□ 1.87
PDLIM7-203ENST00000359895 ADCY10Q96PN6 1610 aa26.7■■□□□ 1.87
PDLIM7-203ENST00000359895 PLB1Q6P1J6 1458 aa26.69■■□□□ 1.86
PDLIM7-203ENST00000359895 ABCA8O94911 1581 aa26.69■■□□□ 1.86
PDLIM7-203ENST00000359895 AKNAQ7Z591 1439 aa26.68■■□□□ 1.86
PDLIM7-203ENST00000359895 ITSN2Q9NZM3 1697 aa26.67■■□□□ 1.86
PDLIM7-203ENST00000359895 TROQ12816 1431 aaPredicted RBP26.67■■□□□ 1.86
PDLIM7-203ENST00000359895 NAIPQ13075 1403 aa26.67■■□□□ 1.86
PDLIM7-203ENST00000359895 ARID3CA6NKF2 412 aa26.66■■□□□ 1.86
PDLIM7-203ENST00000359895 UACAQ9BZF9 1416 aa26.64■■□□□ 1.86
PDLIM7-203ENST00000359895 TIMELESSQ9UNS1 1208 aa26.61■■□□□ 1.85
PDLIM7-203ENST00000359895 SHROOM2Q13796 1616 aa26.6■■□□□ 1.85
PDLIM7-203ENST00000359895 DNMT1P26358 1616 aaKnown RBP26.59■■□□□ 1.85
PDLIM7-203ENST00000359895 PRG4Q92954 1404 aaPredicted RBP26.58■■□□□ 1.84
PDLIM7-203ENST00000359895 ACIN1Q9UKV3 1341 aaKnown RBP26.54■■□□□ 1.84
PDLIM7-203ENST00000359895 RIMBP3CA6NJZ7 1639 aa26.54■■□□□ 1.84
PDLIM7-203ENST00000359895 RIMBP3BA6NNM3 1639 aa26.54■■□□□ 1.84
PDLIM7-203ENST00000359895 RIMBP3Q9UFD9 1639 aa26.54■■□□□ 1.84
PDLIM7-203ENST00000359895 KIF14Q15058 1648 aa26.52■■□□□ 1.84
PDLIM7-203ENST00000359895 DAPK1P53355 1430 aa26.52■■□□□ 1.84
PDLIM7-203ENST00000359895 ROCK1Q13464 1354 aa26.51■■□□□ 1.83
PDLIM7-203ENST00000359895 PTPRGP23470 1445 aa26.5■■□□□ 1.83
PDLIM7-203ENST00000359895 ATP10BO94823 1461 aa26.49■■□□□ 1.83
PDLIM7-203ENST00000359895 GPATCH8Q9UKJ3 1502 aaKnown RBP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms