RNA–Protein interactions for RNA: ENST00000359345.5

SLFNL1-202, Transcript of schlafen like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLFNL1, Length 4,310 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLFNL1-202ENST00000359345 SALL2Q9Y467 1007 aaPredicted RBP17.25■□□□□ 0.35
SLFNL1-202ENST00000359345 RAPGEF2Q9Y4G8 1499 aa17.24■□□□□ 0.35
SLFNL1-202ENST00000359345 KDM2AQ9Y2K7 1162 aa17.22■□□□□ 0.35
SLFNL1-202ENST00000359345 SUPT16HQ9Y5B9 1047 aaKnown RBP17.21■□□□□ 0.35
SLFNL1-202ENST00000359345 SMARCA4P51532 1647 aa17.21■□□□□ 0.35
SLFNL1-202ENST00000359345 TMC1Q8TDI8 760 aa17.19■□□□□ 0.34
SLFNL1-202ENST00000359345 SENP3-EIF4A1A0A087X0R7 540 aa17.17■□□□□ 0.34
SLFNL1-202ENST00000359345 NPM2Q86SE8 214 aaKnown RBP17.17■□□□□ 0.34
SLFNL1-202ENST00000359345 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.17■□□□□ 0.34
SLFNL1-202ENST00000359345 SMARCA2P51531 1590 aa17.16■□□□□ 0.34
SLFNL1-202ENST00000359345 FHAD1B1AJZ9 1412 aa17.16■□□□□ 0.34
SLFNL1-202ENST00000359345 TSPY4P0CV99 314 aa17.15■□□□□ 0.34
SLFNL1-202ENST00000359345 TSPY10P0CW01 314 aa17.15■□□□□ 0.34
SLFNL1-202ENST00000359345 ANP32AP39687 249 aaKnown RBP17.15■□□□□ 0.34
SLFNL1-202ENST00000359345 CHMP7Q8WUX9 453 aaPredicted RBP17.15■□□□□ 0.34
SLFNL1-202ENST00000359345 RAB3GAP2Q9H2M9 1393 aa17.14■□□□□ 0.33
SLFNL1-202ENST00000359345 ATAD2BQ9ULI0 1458 aa17.13■□□□□ 0.33
SLFNL1-202ENST00000359345 SETD5Q9C0A6 1442 aa17.13■□□□□ 0.33
SLFNL1-202ENST00000359345 CCDC136Q96JN2 1154 aa17.12■□□□□ 0.33
SLFNL1-202ENST00000359345 CANXP27824 592 aaKnown RBP17.07■□□□□ 0.32
SLFNL1-202ENST00000359345 DHX57Q6P158 1386 aaKnown RBP17.06■□□□□ 0.32
SLFNL1-202ENST00000359345 CFDP1Q9UEE9 299 aaPredicted RBP17.06■□□□□ 0.32
SLFNL1-202ENST00000359345 TIMELESSQ9UNS1 1208 aa17.04■□□□□ 0.32
SLFNL1-202ENST00000359345 RGL3Q3MIN7 710 aa17.01■□□□□ 0.31
SLFNL1-202ENST00000359345 ANP32EQ9BTT0 268 aa17.01■□□□□ 0.31
SLFNL1-202ENST00000359345 PLEKHD1A6NEE1 506 aa17.01■□□□□ 0.31
SLFNL1-202ENST00000359345 CHGAP10645 457 aaKnown RBP17.01■□□□□ 0.31
SLFNL1-202ENST00000359345 ARHGAP35Q9NRY4 1499 aa17■□□□□ 0.31
SLFNL1-202ENST00000359345 TDRD9Q8NDG6 1382 aaKnown RBP16.99■□□□□ 0.31
SLFNL1-202ENST00000359345 KCNH8Q96L42 1107 aa16.99■□□□□ 0.31
SLFNL1-202ENST00000359345 FOXD1Q16676 465 aa16.99■□□□□ 0.31
SLFNL1-202ENST00000359345 NBR1Q14596 966 aa16.98■□□□□ 0.31
SLFNL1-202ENST00000359345 PPP1R15AO75807 674 aaPredicted RBP16.98■□□□□ 0.31
SLFNL1-202ENST00000359345 FHOD3Q2V2M9 1422 aa16.96■□□□□ 0.31
SLFNL1-202ENST00000359345 CCER2I3L3R5 266 aa16.95■□□□□ 0.3
SLFNL1-202ENST00000359345 BCL11AQ9H165 835 aa16.95■□□□□ 0.3
SLFNL1-202ENST00000359345 EIF4G1Q04637 1599 aaKnown RBP16.95■□□□□ 0.3
SLFNL1-202ENST00000359345 HSPA5P11021 654 aaKnown RBP16.95■□□□□ 0.3
SLFNL1-202ENST00000359345 CARD11Q9BXL7 1154 aa16.94■□□□□ 0.3
SLFNL1-202ENST00000359345 CADPSQ9ULU8 1353 aa16.93■□□□□ 0.3
SLFNL1-202ENST00000359345 ZBTB47Q9UFB7 747 aaPredicted RBP16.91■□□□□ 0.3
SLFNL1-202ENST00000359345 WDR43Q15061 677 aaKnown RBP eCLIP16.89■□□□□ 0.3
SLFNL1-202ENST00000359345 B4GALNT3Q6L9W6 998 aa16.89■□□□□ 0.29
SLFNL1-202ENST00000359345 FMN1Q68DA7 1419 aa16.87■□□□□ 0.29
SLFNL1-202ENST00000359345 PPP4R2Q9NY27 417 aa16.87■□□□□ 0.29
SLFNL1-202ENST00000359345 KIF21BO75037 1637 aa16.86■□□□□ 0.29
SLFNL1-202ENST00000359345 MPHOSPH9Q99550 1183 aa16.85■□□□□ 0.29
SLFNL1-202ENST00000359345 TSHZ2Q9NRE2 1034 aa16.84■□□□□ 0.29
SLFNL1-202ENST00000359345 IGF1RP08069 1367 aa16.83■□□□□ 0.28
SLFNL1-202ENST00000359345 RBM19Q9Y4C8 960 aaKnown RBP16.82■□□□□ 0.28
SLFNL1-202ENST00000359345 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
SLFNL1-202ENST00000359345 L3MBTL2Q969R5 705 aa16.81■□□□□ 0.28
SLFNL1-202ENST00000359345 NEFMP07197 916 aa16.8■□□□□ 0.28
SLFNL1-202ENST00000359345 DCAF11Q8TEB1 546 aa16.8■□□□□ 0.28
SLFNL1-202ENST00000359345 PKD2Q13563 968 aa16.79■□□□□ 0.28
SLFNL1-202ENST00000359345 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.78■□□□□ 0.28
SLFNL1-202ENST00000359345 SENP3Q9H4L4 574 aaPredicted RBP16.78■□□□□ 0.28
SLFNL1-202ENST00000359345 NPM1P06748 294 aaKnown RBP eCLIP16.75■□□□□ 0.27
SLFNL1-202ENST00000359345 ARAP1Q96P48 1450 aa16.75■□□□□ 0.27
SLFNL1-202ENST00000359345 CC2D1BQ5T0F9 858 aaKnown RBP16.74■□□□□ 0.27
SLFNL1-202ENST00000359345 PHLDB1Q86UU1 1377 aa16.73■□□□□ 0.27
SLFNL1-202ENST00000359345 PDS5BQ9NTI5 1447 aa16.73■□□□□ 0.27
SLFNL1-202ENST00000359345 KNSTRNQ9Y448 316 aa16.72■□□□□ 0.27
SLFNL1-202ENST00000359345 FANCD2Q9BXW9 1451 aa16.71■□□□□ 0.27
SLFNL1-202ENST00000359345 FGD5Q6ZNL6 1462 aa16.71■□□□□ 0.26
SLFNL1-202ENST00000359345 STAG3Q9UJ98 1225 aa16.71■□□□□ 0.26
SLFNL1-202ENST00000359345 SLC24A1O60721 1099 aa16.7■□□□□ 0.26
SLFNL1-202ENST00000359345 ERCC6Q03468 1493 aa16.69■□□□□ 0.26
SLFNL1-202ENST00000359345 UPF2Q9HAU5 1272 aaKnown RBP16.67■□□□□ 0.26
SLFNL1-202ENST00000359345 RAD54L2Q9Y4B4 1467 aa16.67■□□□□ 0.26
SLFNL1-202ENST00000359345 EIF5BO60841 1220 aaKnown RBP16.66■□□□□ 0.26
SLFNL1-202ENST00000359345 NCAPD3P42695 1498 aa16.66■□□□□ 0.26
SLFNL1-202ENST00000359345 NUP155O75694 1391 aa16.65■□□□□ 0.26
SLFNL1-202ENST00000359345 CCDC18Q5T9S5 1454 aa16.65■□□□□ 0.26
SLFNL1-202ENST00000359345 PRXQ9BXM0 1461 aa16.64■□□□□ 0.25
SLFNL1-202ENST00000359345 LRRC9Q6ZRR7 1453 aa16.63■□□□□ 0.25
SLFNL1-202ENST00000359345 NEUROD2Q15784 382 aa16.63■□□□□ 0.25
SLFNL1-202ENST00000359345 CDCA8Q53HL2 280 aa16.62■□□□□ 0.25
SLFNL1-202ENST00000359345 RRBP1Q9P2E9 1410 aaKnown RBP16.62■□□□□ 0.25
SLFNL1-202ENST00000359345 NOP58Q9Y2X3 529 aaKnown RBP16.61■□□□□ 0.25
SLFNL1-202ENST00000359345 ERICH3Q5RHP9 1530 aa16.6■□□□□ 0.25
SLFNL1-202ENST00000359345 TMF1P82094 1093 aa16.59■□□□□ 0.25
SLFNL1-202ENST00000359345 FGD6Q6ZV73 1430 aa16.59■□□□□ 0.25
SLFNL1-202ENST00000359345 LAS1LQ9Y4W2 734 aaKnown RBP16.59■□□□□ 0.25
SLFNL1-202ENST00000359345 TNNT2P45379 298 aaPredicted RBP16.58■□□□□ 0.25
SLFNL1-202ENST00000359345 ARXQ96QS3 562 aa16.58■□□□□ 0.24
SLFNL1-202ENST00000359345 HSP90AA1P07900 732 aaKnown RBP16.58■□□□□ 0.24
SLFNL1-202ENST00000359345 PRKRIP1Q9H875 184 aaPredicted RBP16.58■□□□□ 0.24
SLFNL1-202ENST00000359345 ANKRD30AQ9BXX3 1397 aa16.58■□□□□ 0.24
SLFNL1-202ENST00000359345 RGS3P49796 1198 aa16.57■□□□□ 0.24
SLFNL1-202ENST00000359345 ESF1Q9H501 851 aaKnown RBP16.57■□□□□ 0.24
SLFNL1-202ENST00000359345 HNRNPMP52272 730 aaKnown RBP eCLIP16.57■□□□□ 0.24
SLFNL1-202ENST00000359345 ERICH6BQ5W0A0 696 aa16.56■□□□□ 0.24
SLFNL1-202ENST00000359345 CFTRP13569 1480 aa16.55■□□□□ 0.24
SLFNL1-202ENST00000359345 CARMIL2Q6F5E8 1435 aa16.55■□□□□ 0.24
SLFNL1-202ENST00000359345 TOP2BQ02880 1626 aa16.54■□□□□ 0.24
SLFNL1-202ENST00000359345 ROCK2O75116 1388 aaKnown RBP16.54■□□□□ 0.24
SLFNL1-202ENST00000359345 PLPPR3Q6T4P5 718 aa16.54■□□□□ 0.24
SLFNL1-202ENST00000359345 DDRGK1Q96HY6 314 aa16.53■□□□□ 0.24
SLFNL1-202ENST00000359345 CUX1P39880 1505 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms