RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 GRIN2AQ12879 1464 aa21.4■■□□□ 1.02
CCDC197-201ENST00000359253 CUL7Q14999 1698 aa21.39■■□□□ 1.01
CCDC197-201ENST00000359253 NUP160Q12769 1436 aa21.34■■□□□ 1.01
CCDC197-201ENST00000359253 CLASP1Q7Z460 1538 aa21.28■■□□□ 1
CCDC197-201ENST00000359253 CLIP1P30622 1438 aa21.28■■□□□ 1
CCDC197-201ENST00000359253 JPH4Q96JJ6 628 aa21.23■□□□□ 0.99
CCDC197-201ENST00000359253 CEP170Q5SW79 1584 aa21.22■□□□□ 0.99
CCDC197-201ENST00000359253 KIAA0586Q9BVV6 1533 aa21.21■□□□□ 0.99
CCDC197-201ENST00000359253 ARHGEF11O15085 1522 aa21.18■□□□□ 0.98
CCDC197-201ENST00000359253 RIMBP3CA6NJZ7 1639 aa21.12■□□□□ 0.97
CCDC197-201ENST00000359253 RIMBP3BA6NNM3 1639 aa21.12■□□□□ 0.97
CCDC197-201ENST00000359253 RIMBP3Q9UFD9 1639 aa21.12■□□□□ 0.97
CCDC197-201ENST00000359253 VPS8Q8N3P4 1428 aa21.12■□□□□ 0.97
CCDC197-201ENST00000359253 SHROOM2Q13796 1616 aa21.09■□□□□ 0.97
CCDC197-201ENST00000359253 CYB5RLQ6IPT4 315 aa21.08■□□□□ 0.97
CCDC197-201ENST00000359253 CTTNBP2Q8WZ74 1663 aa21.08■□□□□ 0.96
CCDC197-201ENST00000359253 PRG4Q92954 1404 aaPredicted RBP21.07■□□□□ 0.96
CCDC197-201ENST00000359253 TRIM26Q12899 539 aaPredicted RBP21.05■□□□□ 0.96
CCDC197-201ENST00000359253 EFCAB5A4FU69 1503 aa21.04■□□□□ 0.96
CCDC197-201ENST00000359253 ARHGAP35Q9NRY4 1499 aa21.04■□□□□ 0.96
CCDC197-201ENST00000359253 ARAP1Q96P48 1450 aa21.02■□□□□ 0.96
CCDC197-201ENST00000359253 IQGAP2Q13576 1575 aa21.01■□□□□ 0.95
CCDC197-201ENST00000359253 CARMIL2Q6F5E8 1435 aa21■□□□□ 0.95
CCDC197-201ENST00000359253 RANGAP1P46060 587 aaPredicted RBP20.97■□□□□ 0.95
CCDC197-201ENST00000359253 APLP2Q06481 763 aa20.97■□□□□ 0.95
CCDC197-201ENST00000359253 UGGT2Q9NYU1 1516 aa20.95■□□□□ 0.94
CCDC197-201ENST00000359253 ERCC6L2Q5T890 1561 aa20.93■□□□□ 0.94
CCDC197-201ENST00000359253 PCGF6Q9BYE7 350 aa20.89■□□□□ 0.93
CCDC197-201ENST00000359253 SAMD9Q5K651 1589 aa20.89■□□□□ 0.93
CCDC197-201ENST00000359253 PTPRGP23470 1445 aa20.88■□□□□ 0.93
CCDC197-201ENST00000359253 DISP1Q96F81 1524 aa20.88■□□□□ 0.93
CCDC197-201ENST00000359253 FMN1Q68DA7 1419 aa20.86■□□□□ 0.93
CCDC197-201ENST00000359253 MAP3K1Q13233 1512 aa20.85■□□□□ 0.93
CCDC197-201ENST00000359253 NPM1P06748 294 aaKnown RBP eCLIP20.79■□□□□ 0.92
CCDC197-201ENST00000359253 KIAA0556O60303 1618 aa20.78■□□□□ 0.92
CCDC197-201ENST00000359253 FHOD3Q2V2M9 1422 aa20.78■□□□□ 0.92
CCDC197-201ENST00000359253 CASKIN1Q8WXD9 1431 aa20.78■□□□□ 0.92
CCDC197-201ENST00000359253 FYCO1Q9BQS8 1478 aa20.77■□□□□ 0.92
CCDC197-201ENST00000359253 P3H3Q8IVL6 736 aa20.74■□□□□ 0.91
CCDC197-201ENST00000359253 UACAQ9BZF9 1416 aa20.73■□□□□ 0.91
CCDC197-201ENST00000359253 PPARGC1BQ86YN6 1023 aaKnown RBP20.73■□□□□ 0.91
CCDC197-201ENST00000359253 UHRF1BP1LA0JNW5 1464 aa20.72■□□□□ 0.91
CCDC197-201ENST00000359253 TTBK1Q5TCY1 1321 aaPredicted RBP20.71■□□□□ 0.91
CCDC197-201ENST00000359253 PCF11O94913 1555 aaKnown RBP20.68■□□□□ 0.9
CCDC197-201ENST00000359253 TIAM1Q13009 1591 aa20.68■□□□□ 0.9
CCDC197-201ENST00000359253 CFAP43Q8NDM7 1665 aa20.64■□□□□ 0.89
CCDC197-201ENST00000359253 ADCY10Q96PN6 1610 aa20.63■□□□□ 0.89
CCDC197-201ENST00000359253 ABCC2Q92887 1545 aa20.63■□□□□ 0.89
CCDC197-201ENST00000359253 LRRC9Q6ZRR7 1453 aa20.61■□□□□ 0.89
CCDC197-201ENST00000359253 KANK4Q5T7N3 995 aaPredicted RBP20.6■□□□□ 0.89
CCDC197-201ENST00000359253 CCDC18Q5T9S5 1454 aa20.6■□□□□ 0.89
CCDC197-201ENST00000359253 KDM5BQ9UGL1 1544 aa20.59■□□□□ 0.89
CCDC197-201ENST00000359253 PLB1Q6P1J6 1458 aa20.59■□□□□ 0.89
CCDC197-201ENST00000359253 TRHP20396 242 aaPredicted RBP20.59■□□□□ 0.89
CCDC197-201ENST00000359253 ABCA8O94911 1581 aa20.59■□□□□ 0.89
CCDC197-201ENST00000359253 HECW1Q76N89 1606 aa20.58■□□□□ 0.89
CCDC197-201ENST00000359253 ATP1B4Q9UN42 357 aaPredicted RBP20.57■□□□□ 0.88
CCDC197-201ENST00000359253 MAPKBP1O60336 1514 aa20.57■□□□□ 0.88
CCDC197-201ENST00000359253 RRBP1Q9P2E9 1410 aaKnown RBP20.5■□□□□ 0.87
CCDC197-201ENST00000359253 RAPGEF6Q8TEU7 1601 aa20.48■□□□□ 0.87
CCDC197-201ENST00000359253 ATP10BO94823 1461 aa20.48■□□□□ 0.87
CCDC197-201ENST00000359253 ABCC10Q5T3U5 1492 aa20.48■□□□□ 0.87
CCDC197-201ENST00000359253 EPRSP07814 1512 aaKnown RBP20.48■□□□□ 0.87
CCDC197-201ENST00000359253 MTUS2Q5JR59 1369 aa20.47■□□□□ 0.87
CCDC197-201ENST00000359253 ASXL2Q76L83 1435 aa20.47■□□□□ 0.87
CCDC197-201ENST00000359253 FAM69CQ0P6D2 419 aa20.47■□□□□ 0.87
CCDC197-201ENST00000359253 EHBP1L1Q8N3D4 1523 aa20.46■□□□□ 0.87
CCDC197-201ENST00000359253 CDK11AQ9UQ88 783 aaPredicted RBP20.44■□□□□ 0.86
CCDC197-201ENST00000359253 ZCCHC11Q5TAX3 1644 aaKnown RBP20.43■□□□□ 0.86
CCDC197-201ENST00000359253 PLEKHD1A6NEE1 506 aa20.43■□□□□ 0.86
CCDC197-201ENST00000359253 LRRIQ1Q96JM4 1722 aa20.43■□□□□ 0.86
CCDC197-201ENST00000359253 NUP153P49790 1475 aaKnown RBP20.43■□□□□ 0.86
CCDC197-201ENST00000359253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.42■□□□□ 0.86
CCDC197-201ENST00000359253 HNRNPUL2Q1KMD3 747 aaKnown RBP20.42■□□□□ 0.86
CCDC197-201ENST00000359253 CCNB3Q8WWL7 1395 aa20.42■□□□□ 0.86
CCDC197-201ENST00000359253 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.4■□□□□ 0.86
CCDC197-201ENST00000359253 WDR7Q9Y4E6 1490 aa20.38■□□□□ 0.85
CCDC197-201ENST00000359253 SUPT6HQ7KZ85 1726 aaKnown RBP20.38■□□□□ 0.85
CCDC197-201ENST00000359253 HRCP23327 699 aa20.37■□□□□ 0.85
CCDC197-201ENST00000359253 ARID3CA6NKF2 412 aa20.36■□□□□ 0.85
CCDC197-201ENST00000359253 GLI2P10070 1586 aa20.36■□□□□ 0.85
CCDC197-201ENST00000359253 PHLDB1Q86UU1 1377 aa20.35■□□□□ 0.85
CCDC197-201ENST00000359253 KCNH8Q96L42 1107 aa20.35■□□□□ 0.85
CCDC197-201ENST00000359253 DIP2BQ9P265 1576 aa20.34■□□□□ 0.85
CCDC197-201ENST00000359253 ZEB1P37275 1124 aaPredicted RBP20.34■□□□□ 0.85
CCDC197-201ENST00000359253 NCOA2Q15596 1464 aa20.32■□□□□ 0.84
CCDC197-201ENST00000359253 CDK13Q14004 1512 aaKnown RBP20.32■□□□□ 0.84
CCDC197-201ENST00000359253 KIF13AQ9H1H9 1805 aa20.3■□□□□ 0.84
CCDC197-201ENST00000359253 MYOM3Q5VTT5 1437 aa20.29■□□□□ 0.84
CCDC197-201ENST00000359253 MAGI3Q5TCQ9 1506 aa20.29■□□□□ 0.84
CCDC197-201ENST00000359253 TROQ12816 1431 aaPredicted RBP20.27■□□□□ 0.84
CCDC197-201ENST00000359253 FGD6Q6ZV73 1430 aa20.27■□□□□ 0.84
CCDC197-201ENST00000359253 MIA2Q96PC5 1412 aa20.26■□□□□ 0.83
CCDC197-201ENST00000359253 CD109Q6YHK3 1445 aa20.24■□□□□ 0.83
CCDC197-201ENST00000359253 FAM50AQ14320 339 aaKnown RBP20.19■□□□□ 0.82
CCDC197-201ENST00000359253 MAP3K4Q9Y6R4 1608 aa20.19■□□□□ 0.82
CCDC197-201ENST00000359253 TCOF1Q13428 1488 aaKnown RBP20.18■□□□□ 0.82
CCDC197-201ENST00000359253 TEX14Q8IWB6 1497 aa20.18■□□□□ 0.82
CCDC197-201ENST00000359253 ABCA9Q8IUA7 1624 aa20.16■□□□□ 0.82
CCDC197-201ENST00000359253 CCER1Q8TC90 406 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms