RNA–Protein interactions for RNA: ENST00000358994.8

PTPA-206, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-206ENST00000358994 ANP32CO43423 234 aa25.44■■□□□ 1.66
PTPA-206ENST00000358994 HIRIP3Q9BW71 556 aaPredicted RBP25.42■■□□□ 1.66
PTPA-206ENST00000358994 PEG3Q9GZU2 1588 aa25.41■■□□□ 1.66
PTPA-206ENST00000358994 TOP2BQ02880 1626 aa25.4■■□□□ 1.66
PTPA-206ENST00000358994 CDK11AQ9UQ88 783 aaPredicted RBP25.4■■□□□ 1.66
PTPA-206ENST00000358994 SETD5Q9C0A6 1442 aa25.37■■□□□ 1.65
PTPA-206ENST00000358994 CC2D2AQ9P2K1 1620 aa25.36■■□□□ 1.65
PTPA-206ENST00000358994 PRKCSHP14314 528 aaPredicted RBP25.36■■□□□ 1.65
PTPA-206ENST00000358994 IRX6P78412 446 aaPredicted RBP25.32■■□□□ 1.64
PTPA-206ENST00000358994 MYT1LQ9UL68 1186 aa25.3■■□□□ 1.64
PTPA-206ENST00000358994 TIMELESSQ9UNS1 1208 aa25.29■■□□□ 1.64
PTPA-206ENST00000358994 ARHGAP35Q9NRY4 1499 aa25.28■■□□□ 1.64
PTPA-206ENST00000358994 DEKP35659 375 aaKnown RBP25.28■■□□□ 1.64
PTPA-206ENST00000358994 BIVM-ERCC5R4GMW8 1640 aa25.27■■□□□ 1.64
PTPA-206ENST00000358994 HNRNPUQ00839 825 aaKnown RBP eCLIP25.21■■□□□ 1.63
PTPA-206ENST00000358994 TIAM1Q13009 1591 aa25.16■■□□□ 1.62
PTPA-206ENST00000358994 ATAD2BQ9ULI0 1458 aa25.14■■□□□ 1.62
PTPA-206ENST00000358994 PHLDB1Q86UU1 1377 aa25.13■■□□□ 1.61
PTPA-206ENST00000358994 ERICH6BQ5W0A0 696 aa25.13■■□□□ 1.61
PTPA-206ENST00000358994 PPP4R2Q9NY27 417 aa25.13■■□□□ 1.61
PTPA-206ENST00000358994 MAP3K1Q13233 1512 aa25.11■■□□□ 1.61
PTPA-206ENST00000358994 FAM50AQ14320 339 aaKnown RBP25.1■■□□□ 1.61
PTPA-206ENST00000358994 LRRC9Q6ZRR7 1453 aa25.07■■□□□ 1.6
PTPA-206ENST00000358994 KIF27Q86VH2 1401 aa25.07■■□□□ 1.6
PTPA-206ENST00000358994 NOP58Q9Y2X3 529 aaKnown RBP25.01■■□□□ 1.59
PTPA-206ENST00000358994 B4GALNT3Q6L9W6 998 aa25■■□□□ 1.59
PTPA-206ENST00000358994 TONSLQ96HA7 1378 aa25■■□□□ 1.59
PTPA-206ENST00000358994 NBR1Q14596 966 aa24.99■■□□□ 1.59
PTPA-206ENST00000358994 CUX1P39880 1505 aa24.99■■□□□ 1.59
PTPA-206ENST00000358994 PAK3O75914 559 aaPredicted RBP24.99■■□□□ 1.59
PTPA-206ENST00000358994 ANO8Q9HCE9 1232 aaPredicted RBP24.94■■□□□ 1.58
PTPA-206ENST00000358994 CCDC184Q52MB2 194 aa24.89■■□□□ 1.58
PTPA-206ENST00000358994 NCAPD3P42695 1498 aa24.89■■□□□ 1.58
PTPA-206ENST00000358994 FHAD1B1AJZ9 1412 aa24.89■■□□□ 1.57
PTPA-206ENST00000358994 CFAP43Q8NDM7 1665 aa24.87■■□□□ 1.57
PTPA-206ENST00000358994 WASHC2AQ641Q2 1341 aa24.86■■□□□ 1.57
PTPA-206ENST00000358994 KDM5BQ9UGL1 1544 aa24.83■■□□□ 1.57
PTPA-206ENST00000358994 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.81■■□□□ 1.56
PTPA-206ENST00000358994 CCDC18Q5T9S5 1454 aa24.79■■□□□ 1.56
PTPA-206ENST00000358994 PCF11O94913 1555 aaKnown RBP24.79■■□□□ 1.56
PTPA-206ENST00000358994 ZBED9Q6R2W3 1325 aa24.78■■□□□ 1.56
PTPA-206ENST00000358994 UACAQ9BZF9 1416 aa24.77■■□□□ 1.56
PTPA-206ENST00000358994 IGF1RP08069 1367 aa24.77■■□□□ 1.56
PTPA-206ENST00000358994 HSPA5P11021 654 aaKnown RBP24.77■■□□□ 1.56
PTPA-206ENST00000358994 SALL2Q9Y467 1007 aaPredicted RBP24.77■■□□□ 1.56
PTPA-206ENST00000358994 FAM9BQ8IZU0 186 aa24.77■■□□□ 1.56
PTPA-206ENST00000358994 IPO9Q96P70 1041 aaKnown RBP24.75■■□□□ 1.55
PTPA-206ENST00000358994 NCOA2Q15596 1464 aa24.74■■□□□ 1.55
PTPA-206ENST00000358994 ATP1B4Q9UN42 357 aaPredicted RBP24.73■■□□□ 1.55
PTPA-206ENST00000358994 CNTLNQ9NXG0 1405 aa24.73■■□□□ 1.55
PTPA-206ENST00000358994 RTL5Q5HYW3 569 aaPredicted RBP24.71■■□□□ 1.55
PTPA-206ENST00000358994 PRKRIP1Q9H875 184 aaPredicted RBP24.7■■□□□ 1.55
PTPA-206ENST00000358994 ANP32AP39687 249 aaKnown RBP24.7■■□□□ 1.54
PTPA-206ENST00000358994 P3H3Q8IVL6 736 aa24.69■■□□□ 1.54
PTPA-206ENST00000358994 HFM1A2PYH4 1435 aa24.69■■□□□ 1.54
PTPA-206ENST00000358994 MRS2Q9HD23 443 aa24.69■■□□□ 1.54
PTPA-206ENST00000358994 IL27Q8NEV9 243 aa24.68■■□□□ 1.54
PTPA-206ENST00000358994 PTPRKQ15262 1439 aa24.68■■□□□ 1.54
PTPA-206ENST00000358994 PTPN23Q9H3S7 1636 aa24.68■■□□□ 1.54
PTPA-206ENST00000358994 CARMIL1Q5VZK9 1371 aa24.67■■□□□ 1.54
PTPA-206ENST00000358994 ZBTB47Q9UFB7 747 aaPredicted RBP24.67■■□□□ 1.54
PTPA-206ENST00000358994 NESP48681 1621 aa24.66■■□□□ 1.54
PTPA-206ENST00000358994 AQRO60306 1485 aaKnown RBP eCLIP24.66■■□□□ 1.542e-7■■■■□ 20.4
PTPA-206ENST00000358994 FGD6Q6ZV73 1430 aa24.66■■□□□ 1.54
PTPA-206ENST00000358994 HMGXB3Q12766 1538 aa24.66■■□□□ 1.54
PTPA-206ENST00000358994 EIF4G2P78344 907 aaKnown RBP eCLIP24.63■■□□□ 1.53
PTPA-206ENST00000358994 C11orf95C9JLR9 678 aaPredicted RBP24.62■■□□□ 1.53
PTPA-206ENST00000358994 AKNAQ7Z591 1439 aa24.62■■□□□ 1.53
PTPA-206ENST00000358994 NAIPQ13075 1403 aa24.61■■□□□ 1.53
PTPA-206ENST00000358994 FYCO1Q9BQS8 1478 aa24.6■■□□□ 1.53
PTPA-206ENST00000358994 CCDC136Q96JN2 1154 aa24.58■■□□□ 1.53
PTPA-206ENST00000358994 FHOD3Q2V2M9 1422 aa24.58■■□□□ 1.53
PTPA-206ENST00000358994 CCDC7Q96M83 1385 aa24.57■■□□□ 1.52
PTPA-206ENST00000358994 SMG6Q86US8 1419 aaKnown RBP24.56■■□□□ 1.52
PTPA-206ENST00000358994 NCOA1Q15788 1441 aa24.56■■□□□ 1.52
PTPA-206ENST00000358994 RTN4Q9NQC3 1192 aaKnown RBP24.56■■□□□ 1.52
PTPA-206ENST00000358994 CFTRP13569 1480 aa24.55■■□□□ 1.52
PTPA-206ENST00000358994 CASKIN1Q8WXD9 1431 aa24.55■■□□□ 1.52
PTPA-206ENST00000358994 RNF123Q5XPI4 1314 aa24.55■■□□□ 1.52
PTPA-206ENST00000358994 FGD5Q6ZNL6 1462 aa24.54■■□□□ 1.52
PTPA-206ENST00000358994 FMN1Q68DA7 1419 aa24.51■■□□□ 1.51
PTPA-206ENST00000358994 NUDCQ9Y266 331 aa24.49■■□□□ 1.51
PTPA-206ENST00000358994 DENND4BO75064 1496 aaPredicted RBP24.48■■□□□ 1.51
PTPA-206ENST00000358994 L3MBTL2Q969R5 705 aa24.42■■□□□ 1.5
PTPA-206ENST00000358994 MTUS2Q5JR59 1369 aa24.42■■□□□ 1.5
PTPA-206ENST00000358994 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.41■■□□□ 1.5
PTPA-206ENST00000358994 EFCAB5A4FU69 1503 aa24.41■■□□□ 1.5
PTPA-206ENST00000358994 NEFMP07197 916 aa24.4■■□□□ 1.5
PTPA-206ENST00000358994 KIF7Q2M1P5 1343 aa24.4■■□□□ 1.5
PTPA-206ENST00000358994 LAS1LQ9Y4W2 734 aaKnown RBP24.39■■□□□ 1.5
PTPA-206ENST00000358994 NPM2Q86SE8 214 aaKnown RBP24.38■■□□□ 1.49
PTPA-206ENST00000358994 HECW1Q76N89 1606 aa24.38■■□□□ 1.49
PTPA-206ENST00000358994 MYOM3Q5VTT5 1437 aa24.38■■□□□ 1.49
PTPA-206ENST00000358994 USP35Q9P2H5 1018 aa24.38■■□□□ 1.49
PTPA-206ENST00000358994 RRP7BPQ9NSQ0 103 aa24.37■■□□□ 1.49
PTPA-206ENST00000358994 WASHC2CQ9Y4E1 1318 aa24.37■■□□□ 1.49
PTPA-206ENST00000358994 ABCA5Q8WWZ7 1642 aa24.36■■□□□ 1.49
PTPA-206ENST00000358994 CADPSQ9ULU8 1353 aa24.36■■□□□ 1.49
PTPA-206ENST00000358994 SNAPC4Q5SXM2 1469 aa24.35■■□□□ 1.49
PTPA-206ENST00000358994 POLR1AO95602 1720 aaPredicted RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms