RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 DHX8Q14562 1220 aaKnown RBP6.06□□□□□ -1.44
SYNE2-203ENST00000357395 MSNP26038 577 aaKnown RBP6.06□□□□□ -1.44
SYNE2-203ENST00000357395 EEA1Q15075 1411 aa6.06□□□□□ -1.44
SYNE2-203ENST00000357395 NOP58Q9Y2X3 529 aaKnown RBP6.06□□□□□ -1.44
SYNE2-203ENST00000357395 CCDC136Q96JN2 1154 aa6.04□□□□□ -1.44
SYNE2-203ENST00000357395 GOLGA6L4A6NEF3 574 aa6.04□□□□□ -1.44
SYNE2-203ENST00000357395 ARID3AQ99856 593 aa6.04□□□□□ -1.44
SYNE2-203ENST00000357395 CSPP1Q1MSJ5 1256 aa6.04□□□□□ -1.44
SYNE2-203ENST00000357395 FANCIQ9NVI1 1328 aa6.04□□□□□ -1.44
SYNE2-203ENST00000357395 SYAP1Q96A49 352 aaPredicted RBP6.03□□□□□ -1.44
SYNE2-203ENST00000357395 GPS2Q13227 327 aa6.03□□□□□ -1.44
SYNE2-203ENST00000357395 DEKP35659 375 aaKnown RBP6.03□□□□□ -1.44
SYNE2-203ENST00000357395 HSP90AA2PQ14568 343 aaPredicted RBP6.03□□□□□ -1.44
SYNE2-203ENST00000357395 NOM1Q5C9Z4 860 aaKnown RBP6.03□□□□□ -1.44
SYNE2-203ENST00000357395 CCDC66A2RUB6 948 aa6.02□□□□□ -1.45
SYNE2-203ENST00000357395 HTATSF1O43719 755 aaKnown RBP6.02□□□□□ -1.45
SYNE2-203ENST00000357395 RRP9O43818 475 aaKnown RBP6.01□□□□□ -1.45
SYNE2-203ENST00000357395 IL27Q8NEV9 243 aa6.01□□□□□ -1.45
SYNE2-203ENST00000357395 CANXP27824 592 aaKnown RBP6.01□□□□□ -1.45
SYNE2-203ENST00000357395 PPP4R2Q9NY27 417 aa6.01□□□□□ -1.45
SYNE2-203ENST00000357395 GBP4Q96PP9 640 aa6.01□□□□□ -1.45
SYNE2-203ENST00000357395 ARXQ96QS3 562 aa6.01□□□□□ -1.45
SYNE2-203ENST00000357395 ZRSR1Q15695 479 aaKnown RBP6□□□□□ -1.45
SYNE2-203ENST00000357395 MYH16Q9H6N6 1097 aa6□□□□□ -1.45
SYNE2-203ENST00000357395 KIAA2012Q0VF49 1180 aa6□□□□□ -1.45
SYNE2-203ENST00000357395 MIER1Q8N108 512 aa6□□□□□ -1.45
SYNE2-203ENST00000357395 SKOR2Q2VWA4 1001 aaPredicted RBP6□□□□□ -1.45
SYNE2-203ENST00000357395 CCER2I3L3R5 266 aa6□□□□□ -1.45
SYNE2-203ENST00000357395 TEX35Q5T0J7 233 aa5.99□□□□□ -1.45
SYNE2-203ENST00000357395 CDCA8Q53HL2 280 aa5.99□□□□□ -1.45
SYNE2-203ENST00000357395 CAVIN1Q6NZI2 390 aaKnown RBP5.99□□□□□ -1.45
SYNE2-203ENST00000357395 AAMPQ13685 434 aa5.99□□□□□ -1.45
SYNE2-203ENST00000357395 NAP1L5Q96NT1 182 aaPredicted RBP5.99□□□□□ -1.45
SYNE2-203ENST00000357395 NPM2Q86SE8 214 aaKnown RBP5.99□□□□□ -1.45
SYNE2-203ENST00000357395 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.99□□□□□ -1.45
SYNE2-203ENST00000357395 PES1O00541 588 aaKnown RBP5.99□□□□□ -1.45
SYNE2-203ENST00000357395 CHMP4CQ96CF2 233 aa5.99□□□□□ -1.45
SYNE2-203ENST00000357395 CWC15Q9P013 229 aaKnown RBP5.98□□□□□ -1.45
SYNE2-203ENST00000357395 PTMAP06454 111 aaKnown RBP5.98□□□□□ -1.45
SYNE2-203ENST00000357395 DDX11L8A8MPP1 907 aa5.98□□□□□ -1.45
SYNE2-203ENST00000357395 HMGN5P82970 282 aaKnown RBP5.98□□□□□ -1.45
SYNE2-203ENST00000357395 CCDC34Q96HJ3 373 aa5.97□□□□□ -1.45
SYNE2-203ENST00000357395 TPM2P07951 284 aa5.97□□□□□ -1.45
SYNE2-203ENST00000357395 USP8P40818 1118 aa5.96□□□□□ -1.45
SYNE2-203ENST00000357395 CHMP4AQ9BY43 222 aa5.96□□□□□ -1.45
SYNE2-203ENST00000357395 RBM19Q9Y4C8 960 aaKnown RBP5.96□□□□□ -1.46
SYNE2-203ENST00000357395 TCERG1O14776 1098 aaKnown RBP5.96□□□□□ -1.46
SYNE2-203ENST00000357395 ITGAEP38570 1179 aa5.96□□□□□ -1.46
SYNE2-203ENST00000357395 PHLDB1Q86UU1 1377 aa5.95□□□□□ -1.46
SYNE2-203ENST00000357395 HMGB3O15347 200 aaKnown RBP5.95□□□□□ -1.46
SYNE2-203ENST00000357395 CSRNP3Q8WYN3 585 aa5.95□□□□□ -1.46
SYNE2-203ENST00000357395 FAM107BQ9H098 131 aa5.95□□□□□ -1.46
SYNE2-203ENST00000357395 SUPT16HQ9Y5B9 1047 aaKnown RBP5.95□□□□□ -1.46
SYNE2-203ENST00000357395 ACBD3Q9H3P7 528 aa5.94□□□□□ -1.46
SYNE2-203ENST00000357395 TPM3P06753 285 aa5.94□□□□□ -1.46
SYNE2-203ENST00000357395 DNTTIP2Q5QJE6 756 aaKnown RBP5.94□□□□□ -1.46
SYNE2-203ENST00000357395 NGEFQ8N5V2 710 aa5.94□□□□□ -1.46
SYNE2-203ENST00000357395 CAGE1Q8TC20 777 aa5.93□□□□□ -1.46
SYNE2-203ENST00000357395 PDIA4P13667 645 aaKnown RBP5.93□□□□□ -1.46
SYNE2-203ENST00000357395 HNRNPUQ00839 825 aaKnown RBP eCLIP5.93□□□□□ -1.46
SYNE2-203ENST00000357395 HMMRO75330 724 aa5.93□□□□□ -1.46
SYNE2-203ENST00000357395 TONSLQ96HA7 1378 aa5.93□□□□□ -1.46
SYNE2-203ENST00000357395 APPP05067 770 aa5.92□□□□□ -1.46
SYNE2-203ENST00000357395 ANO8Q9HCE9 1232 aaPredicted RBP5.92□□□□□ -1.46
SYNE2-203ENST00000357395 KIF16BQ96L93 1317 aa5.92□□□□□ -1.46
SYNE2-203ENST00000357395 CTR9Q6PD62 1173 aa5.92□□□□□ -1.46
SYNE2-203ENST00000357395 HOMEZQ8IX15 550 aa5.91□□□□□ -1.46
SYNE2-203ENST00000357395 PDCL2Q8N4E4 241 aa5.91□□□□□ -1.46
SYNE2-203ENST00000357395 TPM4P67936 248 aa5.91□□□□□ -1.46
SYNE2-203ENST00000357395 AXDND1Q5T1B0 1012 aaPredicted RBP5.91□□□□□ -1.46
SYNE2-203ENST00000357395 CALD1Q05682 793 aaKnown RBP5.91□□□□□ -1.46
SYNE2-203ENST00000357395 PDE3BQ13370 1112 aa5.91□□□□□ -1.46
SYNE2-203ENST00000357395 UBE2Q2Q8WVN8 375 aa5.91□□□□□ -1.46
SYNE2-203ENST00000357395 CDR1P51861 262 aa5.9□□□□□ -1.46
SYNE2-203ENST00000357395 POLR3GO15318 223 aaPredicted RBP5.9□□□□□ -1.46
SYNE2-203ENST00000357395 IPO9Q96P70 1041 aaKnown RBP5.9□□□□□ -1.47
SYNE2-203ENST00000357395 FAM50AQ14320 339 aaKnown RBP5.9□□□□□ -1.47
SYNE2-203ENST00000357395 NEFHP12036 1026 aa5.9□□□□□ -1.47
SYNE2-203ENST00000357395 SH3BGRP55822 239 aaPredicted RBP5.89□□□□□ -1.47
SYNE2-203ENST00000357395 HSCBQ8IWL3 235 aa5.89□□□□□ -1.47
SYNE2-203ENST00000357395 DIAPH3Q9NSV4 1193 aa5.89□□□□□ -1.47
SYNE2-203ENST00000357395 CCP110O43303 1012 aa5.89□□□□□ -1.47
SYNE2-203ENST00000357395 DDX10Q13206 875 aaKnown RBP5.89□□□□□ -1.47
SYNE2-203ENST00000357395 TSHZ2Q9NRE2 1034 aa5.89□□□□□ -1.47
SYNE2-203ENST00000357395 MCCP23508 829 aa5.88□□□□□ -1.47
SYNE2-203ENST00000357395 RTN4Q9NQC3 1192 aaKnown RBP5.88□□□□□ -1.47
SYNE2-203ENST00000357395 CCDC70Q6NSX1 233 aa5.88□□□□□ -1.47
SYNE2-203ENST00000357395 ARGLU1Q9NWB6 273 aaPredicted RBP5.88□□□□□ -1.47
SYNE2-203ENST00000357395 ATP6V1DQ9Y5K8 247 aa5.88□□□□□ -1.47
SYNE2-203ENST00000357395 PRKCSHP14314 528 aaPredicted RBP5.88□□□□□ -1.47
SYNE2-203ENST00000357395 CREBRFQ8IUR6 639 aa5.88□□□□□ -1.47
SYNE2-203ENST00000357395 RBM28Q9NW13 759 aaKnown RBP5.87□□□□□ -1.47
SYNE2-203ENST00000357395 SETSIPP0DME0 302 aa5.87□□□□□ -1.47
SYNE2-203ENST00000357395 SSR1P43307 286 aaKnown RBP5.87□□□□□ -1.47
SYNE2-203ENST00000357395 KIF3AQ9Y496 699 aa5.86□□□□□ -1.47
SYNE2-203ENST00000357395 TRIM52Q96A61 297 aa5.86□□□□□ -1.47
SYNE2-203ENST00000357395 ROCK2O75116 1388 aaKnown RBP5.86□□□□□ -1.47
SYNE2-203ENST00000357395 STK11IPQ8N1F8 1099 aa5.86□□□□□ -1.47
SYNE2-203ENST00000357395 TMC1Q8TDI8 760 aa5.86□□□□□ -1.47
SYNE2-203ENST00000357395 MAPK8IP3Q9UPT6 1336 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms