RNA–Protein interactions for RNA: ENST00000356415.5

RAP1A-201, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 1,586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-201ENST00000356415 RANGAP1P46060 587 aaPredicted RBP21.23■□□□□ 0.99
RAP1A-201ENST00000356415 NUP160Q12769 1436 aa21.22■□□□□ 0.99
RAP1A-201ENST00000356415 KIAA0586Q9BVV6 1533 aa21.19■□□□□ 0.98
RAP1A-201ENST00000356415 CHD1O14646 1710 aa21.19■□□□□ 0.98
RAP1A-201ENST00000356415 CEP170Q5SW79 1584 aa21.17■□□□□ 0.98
RAP1A-201ENST00000356415 JPH4Q96JJ6 628 aa21.14■□□□□ 0.98
RAP1A-201ENST00000356415 IQGAP2Q13576 1575 aa21.09■□□□□ 0.97
RAP1A-201ENST00000356415 CEP162Q5TB80 1403 aa21.08■□□□□ 0.96
RAP1A-201ENST00000356415 CLIP1P30622 1438 aa21.06■□□□□ 0.96
RAP1A-201ENST00000356415 CTTNBP2Q8WZ74 1663 aa21.06■□□□□ 0.96
RAP1A-201ENST00000356415 P3H3Q8IVL6 736 aa21.04■□□□□ 0.96
RAP1A-201ENST00000356415 CLASP1Q7Z460 1538 aa21.03■□□□□ 0.96
RAP1A-201ENST00000356415 UGGT2Q9NYU1 1516 aa21■□□□□ 0.95
RAP1A-201ENST00000356415 PRG4Q92954 1404 aaPredicted RBP21■□□□□ 0.95
RAP1A-201ENST00000356415 CARMIL2Q6F5E8 1435 aa20.99■□□□□ 0.95
RAP1A-201ENST00000356415 ARHGAP35Q9NRY4 1499 aa20.96■□□□□ 0.95
RAP1A-201ENST00000356415 EFCAB5A4FU69 1503 aa20.93■□□□□ 0.94
RAP1A-201ENST00000356415 TTBK1Q5TCY1 1321 aaPredicted RBP20.93■□□□□ 0.94
RAP1A-201ENST00000356415 DISP1Q96F81 1524 aa20.93■□□□□ 0.94
RAP1A-201ENST00000356415 FHOD3Q2V2M9 1422 aa20.9■□□□□ 0.94
RAP1A-201ENST00000356415 SHROOM2Q13796 1616 aa20.9■□□□□ 0.94
RAP1A-201ENST00000356415 ARAP1Q96P48 1450 aa20.87■□□□□ 0.93
RAP1A-201ENST00000356415 SAMD9Q5K651 1589 aa20.87■□□□□ 0.93
RAP1A-201ENST00000356415 KIAA0556O60303 1618 aa20.86■□□□□ 0.93
RAP1A-201ENST00000356415 PTPRGP23470 1445 aa20.85■□□□□ 0.93
RAP1A-201ENST00000356415 FMN1Q68DA7 1419 aa20.82■□□□□ 0.92
RAP1A-201ENST00000356415 ERCC6L2Q5T890 1561 aa20.82■□□□□ 0.92
RAP1A-201ENST00000356415 ATP1B4Q9UN42 357 aaPredicted RBP20.8■□□□□ 0.92
RAP1A-201ENST00000356415 VPS8Q8N3P4 1428 aa20.77■□□□□ 0.92
RAP1A-201ENST00000356415 ARHGEF11O15085 1522 aa20.77■□□□□ 0.92
RAP1A-201ENST00000356415 CYB5RLQ6IPT4 315 aa20.72■□□□□ 0.91
RAP1A-201ENST00000356415 DNAJC5Q9H3Z4 198 aa20.72■□□□□ 0.91
RAP1A-201ENST00000356415 APLP2Q06481 763 aa20.71■□□□□ 0.91
RAP1A-201ENST00000356415 PLB1Q6P1J6 1458 aa20.69■□□□□ 0.9
RAP1A-201ENST00000356415 CASKIN1Q8WXD9 1431 aa20.69■□□□□ 0.9
RAP1A-201ENST00000356415 UACAQ9BZF9 1416 aa20.69■□□□□ 0.9
RAP1A-201ENST00000356415 ARID3CA6NKF2 412 aa20.66■□□□□ 0.9
RAP1A-201ENST00000356415 RIMBP3CA6NJZ7 1639 aa20.66■□□□□ 0.9
RAP1A-201ENST00000356415 RIMBP3BA6NNM3 1639 aa20.66■□□□□ 0.9
RAP1A-201ENST00000356415 RIMBP3Q9UFD9 1639 aa20.66■□□□□ 0.9
RAP1A-201ENST00000356415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.64■□□□□ 0.9
RAP1A-201ENST00000356415 HNRNPUL2Q1KMD3 747 aaKnown RBP20.64■□□□□ 0.9
RAP1A-201ENST00000356415 FYCO1Q9BQS8 1478 aa20.64■□□□□ 0.89
RAP1A-201ENST00000356415 ABCA8O94911 1581 aa20.61■□□□□ 0.89
RAP1A-201ENST00000356415 PCF11O94913 1555 aaKnown RBP20.6■□□□□ 0.89
RAP1A-201ENST00000356415 RAPGEF6Q8TEU7 1601 aa20.6■□□□□ 0.89
RAP1A-201ENST00000356415 NPM1P06748 294 aaKnown RBP eCLIP20.59■□□□□ 0.89
RAP1A-201ENST00000356415 NUP153P49790 1475 aaKnown RBP20.58■□□□□ 0.89
RAP1A-201ENST00000356415 UHRF1BP1LA0JNW5 1464 aa20.57■□□□□ 0.88
RAP1A-201ENST00000356415 ABCC2Q92887 1545 aa20.57■□□□□ 0.88
RAP1A-201ENST00000356415 HECW1Q76N89 1606 aa20.56■□□□□ 0.88
RAP1A-201ENST00000356415 CDK11AQ9UQ88 783 aaPredicted RBP20.55■□□□□ 0.88
RAP1A-201ENST00000356415 EPRSP07814 1512 aaKnown RBP20.55■□□□□ 0.88
RAP1A-201ENST00000356415 CCDC18Q5T9S5 1454 aa20.53■□□□□ 0.88
RAP1A-201ENST00000356415 ATP10BO94823 1461 aa20.52■□□□□ 0.88
RAP1A-201ENST00000356415 PPARGC1BQ86YN6 1023 aaKnown RBP20.51■□□□□ 0.87
RAP1A-201ENST00000356415 PLEKHD1A6NEE1 506 aa20.51■□□□□ 0.87
RAP1A-201ENST00000356415 KANK4Q5T7N3 995 aaPredicted RBP20.49■□□□□ 0.87
RAP1A-201ENST00000356415 CDK13Q14004 1512 aaKnown RBP20.49■□□□□ 0.87
RAP1A-201ENST00000356415 KDM5BQ9UGL1 1544 aa20.48■□□□□ 0.87
RAP1A-201ENST00000356415 ADCY10Q96PN6 1610 aa20.48■□□□□ 0.87
RAP1A-201ENST00000356415 MAP3K1Q13233 1512 aa20.47■□□□□ 0.87
RAP1A-201ENST00000356415 MTUS2Q5JR59 1369 aa20.46■□□□□ 0.87
RAP1A-201ENST00000356415 TIAM1Q13009 1591 aa20.45■□□□□ 0.86
RAP1A-201ENST00000356415 LRRC9Q6ZRR7 1453 aa20.41■□□□□ 0.86
RAP1A-201ENST00000356415 KCNH8Q96L42 1107 aa20.39■□□□□ 0.85
RAP1A-201ENST00000356415 TROQ12816 1431 aaPredicted RBP20.37■□□□□ 0.85
RAP1A-201ENST00000356415 ZCCHC11Q5TAX3 1644 aaKnown RBP20.37■□□□□ 0.85
RAP1A-201ENST00000356415 LRRIQ1Q96JM4 1722 aa20.37■□□□□ 0.85
RAP1A-201ENST00000356415 ASXL2Q76L83 1435 aa20.36■□□□□ 0.85
RAP1A-201ENST00000356415 CFAP43Q8NDM7 1665 aa20.35■□□□□ 0.85
RAP1A-201ENST00000356415 MAGI3Q5TCQ9 1506 aa20.34■□□□□ 0.85
RAP1A-201ENST00000356415 EHBP1L1Q8N3D4 1523 aa20.32■□□□□ 0.84
RAP1A-201ENST00000356415 WDR7Q9Y4E6 1490 aa20.32■□□□□ 0.84
RAP1A-201ENST00000356415 MAPKBP1O60336 1514 aa20.27■□□□□ 0.84
RAP1A-201ENST00000356415 NCOA2Q15596 1464 aa20.26■□□□□ 0.83
RAP1A-201ENST00000356415 CCNB3Q8WWL7 1395 aa20.24■□□□□ 0.83
RAP1A-201ENST00000356415 FAM69CQ0P6D2 419 aa20.22■□□□□ 0.83
RAP1A-201ENST00000356415 KIF14Q15058 1648 aa20.22■□□□□ 0.83
RAP1A-201ENST00000356415 PHLDB1Q86UU1 1377 aa20.21■□□□□ 0.83
RAP1A-201ENST00000356415 SUPT6HQ7KZ85 1726 aaKnown RBP20.21■□□□□ 0.83
RAP1A-201ENST00000356415 CFDP1Q9UEE9 299 aaPredicted RBP20.18■□□□□ 0.82
RAP1A-201ENST00000356415 ABCC10Q5T3U5 1492 aa20.17■□□□□ 0.82
RAP1A-201ENST00000356415 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.16■□□□□ 0.82
RAP1A-201ENST00000356415 MYOM3Q5VTT5 1437 aa20.16■□□□□ 0.82
RAP1A-201ENST00000356415 GPATCH8Q9UKJ3 1502 aaKnown RBP20.14■□□□□ 0.81
RAP1A-201ENST00000356415 TRHP20396 242 aaPredicted RBP20.14■□□□□ 0.81
RAP1A-201ENST00000356415 ZNF777Q9ULD5 760 aaPredicted RBP20.14■□□□□ 0.81
RAP1A-201ENST00000356415 CD109Q6YHK3 1445 aa20.13■□□□□ 0.81
RAP1A-201ENST00000356415 FAM50AQ14320 339 aaKnown RBP20.12■□□□□ 0.81
RAP1A-201ENST00000356415 EFCAB2Q5VUJ9 269 aa20.12■□□□□ 0.81
RAP1A-201ENST00000356415 PLCH2O75038 1416 aa20.11■□□□□ 0.81
RAP1A-201ENST00000356415 TRIM26Q12899 539 aaPredicted RBP20.11■□□□□ 0.81
RAP1A-201ENST00000356415 MIA2Q96PC5 1412 aa20.1■□□□□ 0.81
RAP1A-201ENST00000356415 TTC37Q6PGP7 1564 aa20.09■□□□□ 0.81
RAP1A-201ENST00000356415 FGD6Q6ZV73 1430 aa20.09■□□□□ 0.81
RAP1A-201ENST00000356415 ABCA9Q8IUA7 1624 aa20.08■□□□□ 0.81
RAP1A-201ENST00000356415 GLI2P10070 1586 aa20.08■□□□□ 0.8
RAP1A-201ENST00000356415 DIP2BQ9P265 1576 aa20.07■□□□□ 0.8
RAP1A-201ENST00000356415 RRBP1Q9P2E9 1410 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 175.2 ms