RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 ERCC6L2Q5T890 1561 aa18.52■□□□□ 0.56
CAPN3-204ENST00000356316 JPH4Q96JJ6 628 aa18.51■□□□□ 0.55
CAPN3-204ENST00000356316 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
CAPN3-204ENST00000356316 KIF27Q86VH2 1401 aa18.48■□□□□ 0.55
CAPN3-204ENST00000356316 PRG4Q92954 1404 aaPredicted RBP18.48■□□□□ 0.55
CAPN3-204ENST00000356316 IGF1RP08069 1367 aa18.43■□□□□ 0.54
CAPN3-204ENST00000356316 CUL7Q14999 1698 aa18.4■□□□□ 0.54
CAPN3-204ENST00000356316 RUSC2Q8N2Y8 1516 aa18.39■□□□□ 0.54
CAPN3-204ENST00000356316 NPM1P06748 294 aaKnown RBP eCLIP18.39■□□□□ 0.53
CAPN3-204ENST00000356316 KIAA0586Q9BVV6 1533 aa18.35■□□□□ 0.53
CAPN3-204ENST00000356316 CARMIL1Q5VZK9 1371 aa18.33■□□□□ 0.53
CAPN3-204ENST00000356316 TTBK1Q5TCY1 1321 aaPredicted RBP18.25■□□□□ 0.51
CAPN3-204ENST00000356316 CARMIL2Q6F5E8 1435 aa18.23■□□□□ 0.51
CAPN3-204ENST00000356316 FAM69CQ0P6D2 419 aa18.23■□□□□ 0.51
CAPN3-204ENST00000356316 KIF13AQ9H1H9 1805 aa18.23■□□□□ 0.51
CAPN3-204ENST00000356316 PTPRGP23470 1445 aa18.22■□□□□ 0.51
CAPN3-204ENST00000356316 ADCY10Q96PN6 1610 aa18.2■□□□□ 0.5
CAPN3-204ENST00000356316 IQGAP2Q13576 1575 aa18.18■□□□□ 0.5
CAPN3-204ENST00000356316 MAPKBP1O60336 1514 aa18.18■□□□□ 0.5
CAPN3-204ENST00000356316 TNIKQ9UKE5 1360 aa18.17■□□□□ 0.5
CAPN3-204ENST00000356316 ABCC10Q5T3U5 1492 aa18.17■□□□□ 0.5
CAPN3-204ENST00000356316 RAPGEF2Q9Y4G8 1499 aa18.17■□□□□ 0.5
CAPN3-204ENST00000356316 DIP2BQ9P265 1576 aa18.1■□□□□ 0.49
CAPN3-204ENST00000356316 ABCC2Q92887 1545 aa18.06■□□□□ 0.48
CAPN3-204ENST00000356316 UACAQ9BZF9 1416 aa18.06■□□□□ 0.48
CAPN3-204ENST00000356316 TSPOAP1O95153 1857 aa18.05■□□□□ 0.48
CAPN3-204ENST00000356316 DISP1Q96F81 1524 aa18.05■□□□□ 0.48
CAPN3-204ENST00000356316 UGGT2Q9NYU1 1516 aa18.04■□□□□ 0.48
CAPN3-204ENST00000356316 UHRF1BP1LA0JNW5 1464 aa18.03■□□□□ 0.48
CAPN3-204ENST00000356316 PLB1Q6P1J6 1458 aa18.01■□□□□ 0.47
CAPN3-204ENST00000356316 FAM9AQ8IZU1 332 aaPredicted RBP18.01■□□□□ 0.47
CAPN3-204ENST00000356316 CTTNBP2Q8WZ74 1663 aa18.01■□□□□ 0.47
CAPN3-204ENST00000356316 ASXL2Q76L83 1435 aa18■□□□□ 0.47
CAPN3-204ENST00000356316 KIAA0556O60303 1618 aa17.99■□□□□ 0.47
CAPN3-204ENST00000356316 GOLGA3Q08378 1498 aa17.98■□□□□ 0.47
CAPN3-204ENST00000356316 KDM6BO15054 1643 aa17.98■□□□□ 0.47
CAPN3-204ENST00000356316 PRXQ9BXM0 1461 aa17.95■□□□□ 0.46
CAPN3-204ENST00000356316 KDM5BQ9UGL1 1544 aa17.94■□□□□ 0.46
CAPN3-204ENST00000356316 GLI2P10070 1586 aa17.93■□□□□ 0.46
CAPN3-204ENST00000356316 CSRNP3Q8WYN3 585 aa17.93■□□□□ 0.46
CAPN3-204ENST00000356316 ZCCHC11Q5TAX3 1644 aaKnown RBP17.91■□□□□ 0.46
CAPN3-204ENST00000356316 EPRSP07814 1512 aaKnown RBP17.88■□□□□ 0.45
CAPN3-204ENST00000356316 PPP6R1Q9UPN7 881 aa17.88■□□□□ 0.45
CAPN3-204ENST00000356316 ADRA2BP18089 450 aa17.86■□□□□ 0.45
CAPN3-204ENST00000356316 P3H3Q8IVL6 736 aa17.86■□□□□ 0.45
CAPN3-204ENST00000356316 KCNH8Q96L42 1107 aa17.85■□□□□ 0.45
CAPN3-204ENST00000356316 TEX14Q8IWB6 1497 aa17.84■□□□□ 0.45
CAPN3-204ENST00000356316 PPRC1Q5VV67 1664 aaKnown RBP17.83■□□□□ 0.45
CAPN3-204ENST00000356316 MAP3K4Q9Y6R4 1608 aa17.83■□□□□ 0.45
CAPN3-204ENST00000356316 WDR7Q9Y4E6 1490 aa17.83■□□□□ 0.45
CAPN3-204ENST00000356316 ABCA8O94911 1581 aa17.82■□□□□ 0.44
CAPN3-204ENST00000356316 EEA1Q15075 1411 aa17.81■□□□□ 0.44
CAPN3-204ENST00000356316 RANGAP1P46060 587 aaPredicted RBP17.78■□□□□ 0.44
CAPN3-204ENST00000356316 KDM4FA0A1W2PPD8 638 aa17.77■□□□□ 0.44
CAPN3-204ENST00000356316 ARID3CA6NKF2 412 aa17.77■□□□□ 0.44
CAPN3-204ENST00000356316 CD109Q6YHK3 1445 aa17.76■□□□□ 0.43
CAPN3-204ENST00000356316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.75■□□□□ 0.43
CAPN3-204ENST00000356316 HNRNPUL2Q1KMD3 747 aaKnown RBP17.75■□□□□ 0.43
CAPN3-204ENST00000356316 CFAP43Q8NDM7 1665 aa17.74■□□□□ 0.43
CAPN3-204ENST00000356316 SAMD9Q5K651 1589 aa17.71■□□□□ 0.43
CAPN3-204ENST00000356316 COL17A1Q9UMD9 1497 aaPredicted RBP17.71■□□□□ 0.43
CAPN3-204ENST00000356316 ATP10BO94823 1461 aa17.7■□□□□ 0.42
CAPN3-204ENST00000356316 MAGI3Q5TCQ9 1506 aa17.7■□□□□ 0.42
CAPN3-204ENST00000356316 RAPGEF6Q8TEU7 1601 aa17.68■□□□□ 0.42
CAPN3-204ENST00000356316 UBTFP17480 764 aaKnown RBP17.64■□□□□ 0.41
CAPN3-204ENST00000356316 PIAS4Q8N2W9 510 aaPredicted RBP17.64■□□□□ 0.41
CAPN3-204ENST00000356316 KIF21BO75037 1637 aa17.63■□□□□ 0.41
CAPN3-204ENST00000356316 ADGRL1O94910 1474 aa17.63■□□□□ 0.41
CAPN3-204ENST00000356316 PLEKHD1A6NEE1 506 aa17.62■□□□□ 0.41
CAPN3-204ENST00000356316 EHMT2Q96KQ7 1210 aa17.62■□□□□ 0.41
CAPN3-204ENST00000356316 FHOD3Q2V2M9 1422 aa17.62■□□□□ 0.41
CAPN3-204ENST00000356316 PHLDB1Q86UU1 1377 aa17.6■□□□□ 0.41
CAPN3-204ENST00000356316 ABCA9Q8IUA7 1624 aa17.58■□□□□ 0.41
CAPN3-204ENST00000356316 EFCAB5A4FU69 1503 aa17.58■□□□□ 0.41
CAPN3-204ENST00000356316 NUP153P49790 1475 aaKnown RBP17.57■□□□□ 0.4
CAPN3-204ENST00000356316 ARAP3Q8WWN8 1544 aa17.57■□□□□ 0.4
CAPN3-204ENST00000356316 ATP1B4Q9UN42 357 aaPredicted RBP17.55■□□□□ 0.4
CAPN3-204ENST00000356316 NEO1Q92859 1461 aa17.52■□□□□ 0.4
CAPN3-204ENST00000356316 RAPGEF3O95398 923 aa17.51■□□□□ 0.39
CAPN3-204ENST00000356316 FMN1Q68DA7 1419 aa17.47■□□□□ 0.39
CAPN3-204ENST00000356316 CDK11AQ9UQ88 783 aaPredicted RBP17.46■□□□□ 0.39
CAPN3-204ENST00000356316 ARID4BQ4LE39 1312 aaPredicted RBP17.44■□□□□ 0.38
CAPN3-204ENST00000356316 CFAP74Q9C0B2 1584 aa17.43■□□□□ 0.38
CAPN3-204ENST00000356316 FANCAO15360 1455 aa17.43■□□□□ 0.38
CAPN3-204ENST00000356316 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.42■□□□□ 0.38
CAPN3-204ENST00000356316 AKNAQ7Z591 1439 aa17.42■□□□□ 0.38
CAPN3-204ENST00000356316 CDK13Q14004 1512 aaKnown RBP17.42■□□□□ 0.38
CAPN3-204ENST00000356316 DENND4BO75064 1496 aaPredicted RBP17.41■□□□□ 0.38
CAPN3-204ENST00000356316 ARHGAP35Q9NRY4 1499 aa17.41■□□□□ 0.38
CAPN3-204ENST00000356316 HECW1Q76N89 1606 aa17.4■□□□□ 0.38
CAPN3-204ENST00000356316 MSH5O43196 834 aa17.38■□□□□ 0.37
CAPN3-204ENST00000356316 TTC37Q6PGP7 1564 aa17.37■□□□□ 0.37
CAPN3-204ENST00000356316 HECW2Q9P2P5 1572 aa17.36■□□□□ 0.37
CAPN3-204ENST00000356316 FRMPD1Q5SYB0 1578 aa17.36■□□□□ 0.37
CAPN3-204ENST00000356316 EFCAB2Q5VUJ9 269 aa17.35■□□□□ 0.37
CAPN3-204ENST00000356316 PLCH2O75038 1416 aa17.35■□□□□ 0.37
CAPN3-204ENST00000356316 RICTORQ6R327 1708 aa17.35■□□□□ 0.37
CAPN3-204ENST00000356316 CLIP1P30622 1438 aa17.32■□□□□ 0.36
CAPN3-204ENST00000356316 ADAMTSL3P82987 1691 aa17.32■□□□□ 0.36
CAPN3-204ENST00000356316 MYO5CQ9NQX4 1742 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms