RNA–Protein interactions for RNA: ENST00000355832.9

ERCC6-201, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC6, Length 8,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-201ENST00000355832 ZRSR1Q15695 479 aaKnown RBP11.68□□□□□ -0.54
ERCC6-201ENST00000355832 CHAF1AQ13111 956 aaPredicted RBP11.67□□□□□ -0.54
ERCC6-201ENST00000355832 P3H3Q8IVL6 736 aa11.67□□□□□ -0.54
ERCC6-201ENST00000355832 CASC1Q6TDU7 716 aa11.67□□□□□ -0.54
ERCC6-201ENST00000355832 MSNP26038 577 aaKnown RBP11.67□□□□□ -0.54
ERCC6-201ENST00000355832 EIF4G2P78344 907 aaKnown RBP eCLIP11.66□□□□□ -0.54
ERCC6-201ENST00000355832 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.65□□□□□ -0.54
ERCC6-201ENST00000355832 TNNT3P45378 269 aaPredicted RBP11.65□□□□□ -0.54
ERCC6-201ENST00000355832 ZNF777Q9ULD5 760 aaPredicted RBP11.64□□□□□ -0.55
ERCC6-201ENST00000355832 GOLGA6L6A8MZA4 724 aa11.64□□□□□ -0.55
ERCC6-201ENST00000355832 RBM19Q9Y4C8 960 aaKnown RBP11.62□□□□□ -0.55
ERCC6-201ENST00000355832 HIRIP3Q9BW71 556 aaPredicted RBP11.6□□□□□ -0.55
ERCC6-201ENST00000355832 HSP90AB1P08238 724 aaKnown RBP11.59□□□□□ -0.55
ERCC6-201ENST00000355832 ARID4BQ4LE39 1312 aaPredicted RBP11.59□□□□□ -0.55
ERCC6-201ENST00000355832 NRDCO43847 1150 aa11.58□□□□□ -0.56
ERCC6-201ENST00000355832 MYO15BQ96JP2 1530 aa11.57□□□□□ -0.56
ERCC6-201ENST00000355832 ABCC9O60706 1549 aa11.57□□□□□ -0.56
ERCC6-201ENST00000355832 FTSJ3Q8IY81 847 aaKnown RBP11.57□□□□□ -0.56
ERCC6-201ENST00000355832 ARID3CA6NKF2 412 aa11.56□□□□□ -0.56
ERCC6-201ENST00000355832 PLCB2Q00722 1185 aa11.56□□□□□ -0.56
ERCC6-201ENST00000355832 B4GALNT3Q6L9W6 998 aa11.55□□□□□ -0.56
ERCC6-201ENST00000355832 PTMSP20962 102 aa11.54□□□□□ -0.56
ERCC6-201ENST00000355832 SCRIBQ14160 1630 aa11.54□□□□□ -0.56
ERCC6-201ENST00000355832 FBLN2P98095 1184 aa11.53□□□□□ -0.56
ERCC6-201ENST00000355832 HSCBQ8IWL3 235 aa11.53□□□□□ -0.56
ERCC6-201ENST00000355832 KDM2AQ9Y2K7 1162 aa11.53□□□□□ -0.56
ERCC6-201ENST00000355832 CALRP27797 417 aaKnown RBP11.53□□□□□ -0.56
ERCC6-201ENST00000355832 PNNQ9H307 717 aaKnown RBP11.53□□□□□ -0.56
ERCC6-201ENST00000355832 TPRNQ4KMQ1 711 aa11.52□□□□□ -0.56
ERCC6-201ENST00000355832 RGS3P49796 1198 aa11.52□□□□□ -0.57
ERCC6-201ENST00000355832 CHGAP10645 457 aaKnown RBP11.52□□□□□ -0.57
ERCC6-201ENST00000355832 CHIC2Q9UKJ5 165 aa11.5□□□□□ -0.57
ERCC6-201ENST00000355832 CLIP1P30622 1438 aa11.5□□□□□ -0.57
ERCC6-201ENST00000355832 STAG3Q9UJ98 1225 aa11.5□□□□□ -0.57
ERCC6-201ENST00000355832 ARID3AQ99856 593 aa11.49□□□□□ -0.57
ERCC6-201ENST00000355832 RSPH6AQ9H0K4 717 aa11.48□□□□□ -0.57
ERCC6-201ENST00000355832 CHMP4BQ9H444 224 aaKnown RBP11.48□□□□□ -0.57
ERCC6-201ENST00000355832 HSP90AA2PQ14568 343 aaPredicted RBP11.48□□□□□ -0.57
ERCC6-201ENST00000355832 MTUS2Q5JR59 1369 aa11.48□□□□□ -0.57
ERCC6-201ENST00000355832 DRC7Q8IY82 874 aa11.47□□□□□ -0.57
ERCC6-201ENST00000355832 MS4A1P11836 297 aa11.46□□□□□ -0.57
ERCC6-201ENST00000355832 KIAA2012Q0VF49 1180 aa11.46□□□□□ -0.57
ERCC6-201ENST00000355832 PABPN1Q86U42 306 aaKnown RBP eCLIP11.46□□□□□ -0.57
ERCC6-201ENST00000355832 KNSTRNQ9Y448 316 aa11.45□□□□□ -0.58
ERCC6-201ENST00000355832 CFAP53Q96M91 514 aa11.45□□□□□ -0.58
ERCC6-201ENST00000355832 GBP4Q96PP9 640 aa11.45□□□□□ -0.58
ERCC6-201ENST00000355832 CEP162Q5TB80 1403 aa11.45□□□□□ -0.58
ERCC6-201ENST00000355832 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.45□□□□□ -0.58
ERCC6-201ENST00000355832 GOLGA3Q08378 1498 aa11.45□□□□□ -0.58
ERCC6-201ENST00000355832 VSIG10Q8N0Z9 540 aa11.44□□□□□ -0.58
ERCC6-201ENST00000355832 CDCA8Q53HL2 280 aa11.44□□□□□ -0.58
ERCC6-201ENST00000355832 CFAP44Q96MT7 982 aa11.44□□□□□ -0.58
ERCC6-201ENST00000355832 CCER2I3L3R5 266 aa11.43□□□□□ -0.58
ERCC6-201ENST00000355832 GOLGA6L4A6NEF3 574 aa11.43□□□□□ -0.58
ERCC6-201ENST00000355832 ESF1Q9H501 851 aaKnown RBP11.43□□□□□ -0.58
ERCC6-201ENST00000355832 TSHZ2Q9NRE2 1034 aa11.43□□□□□ -0.58
ERCC6-201ENST00000355832 IPO9Q96P70 1041 aaKnown RBP11.42□□□□□ -0.58
ERCC6-201ENST00000355832 GOLGA6L3A6NEY3 463 aa11.41□□□□□ -0.58
ERCC6-201ENST00000355832 TSPY4P0CV99 314 aa11.4□□□□□ -0.58
ERCC6-201ENST00000355832 TSPY10P0CW01 314 aa11.4□□□□□ -0.58
ERCC6-201ENST00000355832 USP35Q9P2H5 1018 aa11.4□□□□□ -0.58
ERCC6-201ENST00000355832 EEA1Q15075 1411 aa11.4□□□□□ -0.58
ERCC6-201ENST00000355832 SETQ01105 290 aaPredicted RBP11.4□□□□□ -0.58
ERCC6-201ENST00000355832 RSF1Q96T23 1441 aaPredicted RBP11.4□□□□□ -0.58
ERCC6-201ENST00000355832 TCERG1O14776 1098 aaKnown RBP11.39□□□□□ -0.59
ERCC6-201ENST00000355832 SPRYD3Q8NCJ5 442 aa11.39□□□□□ -0.59
ERCC6-201ENST00000355832 MCCP23508 829 aa11.39□□□□□ -0.59
ERCC6-201ENST00000355832 FRAT1Q92837 279 aaPredicted RBP11.39□□□□□ -0.59
ERCC6-201ENST00000355832 GZF1Q9H116 711 aaPredicted RBP11.39□□□□□ -0.59
ERCC6-201ENST00000355832 SENP3-EIF4A1A0A087X0R7 540 aa11.39□□□□□ -0.59
ERCC6-201ENST00000355832 SYAP1Q96A49 352 aaPredicted RBP11.38□□□□□ -0.59
ERCC6-201ENST00000355832 GOLGA6L1Q8N7Z2 621 aa11.37□□□□□ -0.59
ERCC6-201ENST00000355832 FGD1P98174 961 aa11.37□□□□□ -0.59
ERCC6-201ENST00000355832 ZCCHC6Q5VYS8 1495 aaKnown RBP11.37□□□□□ -0.59
ERCC6-201ENST00000355832 RRP7BPQ9NSQ0 103 aa11.36□□□□□ -0.59
ERCC6-201ENST00000355832 KCNJ4P48050 445 aa11.35□□□□□ -0.59
ERCC6-201ENST00000355832 MAPK8IP3Q9UPT6 1336 aa11.35□□□□□ -0.59
ERCC6-201ENST00000355832 CARD11Q9BXL7 1154 aa11.34□□□□□ -0.59
ERCC6-201ENST00000355832 ZBTB7CA1YPR0 619 aa11.34□□□□□ -0.59
ERCC6-201ENST00000355832 APPP05067 770 aa11.33□□□□□ -0.6
ERCC6-201ENST00000355832 TULP1O00294 542 aaPredicted RBP11.32□□□□□ -0.6
ERCC6-201ENST00000355832 SLKQ9H2G2 1235 aaPredicted RBP11.32□□□□□ -0.6
ERCC6-201ENST00000355832 NEUROD2Q15784 382 aa11.31□□□□□ -0.6
ERCC6-201ENST00000355832 NUDCQ9Y266 331 aa11.31□□□□□ -0.6
ERCC6-201ENST00000355832 NOC3LQ8WTT2 800 aaKnown RBP11.31□□□□□ -0.6
ERCC6-201ENST00000355832 A0A0U1RQG5 324 aaPredicted RBP11.31□□□□□ -0.6
ERCC6-201ENST00000355832 PLPPR3Q6T4P5 718 aa11.3□□□□□ -0.6
ERCC6-201ENST00000355832 PHF14O94880 888 aa11.3□□□□□ -0.6
ERCC6-201ENST00000355832 PODXL2Q9NZ53 605 aa11.3□□□□□ -0.6
ERCC6-201ENST00000355832 NAP1L2Q9ULW6 460 aaPredicted RBP11.29□□□□□ -0.6
ERCC6-201ENST00000355832 OS9Q13438 667 aaPredicted RBP11.29□□□□□ -0.6
ERCC6-201ENST00000355832 GSE1Q14687 1217 aa11.29□□□□□ -0.6
ERCC6-201ENST00000355832 CEP164Q9UPV0 1460 aa11.28□□□□□ -0.6
ERCC6-201ENST00000355832 CC2D1BQ5T0F9 858 aaKnown RBP11.28□□□□□ -0.6
ERCC6-201ENST00000355832 RCAN3Q9UKA8 241 aa11.28□□□□□ -0.6
ERCC6-201ENST00000355832 TIMELESSQ9UNS1 1208 aa11.28□□□□□ -0.6
ERCC6-201ENST00000355832 TNIKQ9UKE5 1360 aa11.27□□□□□ -0.61
ERCC6-201ENST00000355832 CALD1Q05682 793 aaKnown RBP11.27□□□□□ -0.61
ERCC6-201ENST00000355832 DDX11L8A8MPP1 907 aa11.27□□□□□ -0.61
ERCC6-201ENST00000355832 TPM4P67936 248 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms