RNA–Protein interactions for RNA: ENST00000355674.9

RSL1D1-201, Transcript of ribosomal L1 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene RSL1D1, Length 1,323 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSL1D1-201ENST00000355674 WIZO95785 1651 aa14.03□□□□□ -0.16
RSL1D1-201ENST00000355674 ATAD2BQ9ULI0 1458 aa13.95□□□□□ -0.18
RSL1D1-201ENST00000355674 RSF1Q96T23 1441 aaPredicted RBP13.93□□□□□ -0.18
RSL1D1-201ENST00000355674 SMARCA2P51531 1590 aa13.93□□□□□ -0.18
RSL1D1-201ENST00000355674 PEG3Q9GZU2 1588 aa13.92□□□□□ -0.18
RSL1D1-201ENST00000355674 PROM2Q8N271 834 aa13.89□□□□□ -0.19
RSL1D1-201ENST00000355674 NCAPD3P42695 1498 aa13.88□□□□□ -0.19
RSL1D1-201ENST00000355674 BAZ1BQ9UIG0 1483 aaKnown RBP13.86□□□□□ -0.19
RSL1D1-201ENST00000355674 HMGXB3Q12766 1538 aa13.85□□□□□ -0.19
RSL1D1-201ENST00000355674 ZNF579Q8NAF0 562 aaKnown RBP13.83□□□□□ -0.2
RSL1D1-201ENST00000355674 ZRANB1Q9UGI0 708 aa13.83□□□□□ -0.2
RSL1D1-201ENST00000355674 MNX1P50219 401 aaPredicted RBP13.81□□□□□ -0.2
RSL1D1-201ENST00000355674 SUPT5HO00267 1087 aaKnown RBP13.8□□□□□ -0.2
RSL1D1-201ENST00000355674 CLCN6P51797 869 aa13.8□□□□□ -0.2
RSL1D1-201ENST00000355674 POTEIP0CG38 1075 aa13.79□□□□□ -0.2
RSL1D1-201ENST00000355674 TOP2AP11388 1531 aaKnown RBP13.75□□□□□ -0.21
RSL1D1-201ENST00000355674 NPM1P06748 294 aaKnown RBP eCLIP13.73□□□□□ -0.21
RSL1D1-201ENST00000355674 PAK3O75914 559 aaPredicted RBP13.7□□□□□ -0.22
RSL1D1-201ENST00000355674 LHX8Q68G74 356 aa13.68□□□□□ -0.22
RSL1D1-201ENST00000355674 PHF12Q96QT6 1004 aa13.67□□□□□ -0.22
RSL1D1-201ENST00000355674 GALR2O43603 387 aaPredicted RBP13.66□□□□□ -0.22
RSL1D1-201ENST00000355674 DCBLD2Q96PD2 775 aa13.65□□□□□ -0.22
RSL1D1-201ENST00000355674 NESP48681 1621 aa13.64□□□□□ -0.23
RSL1D1-201ENST00000355674 CCDC88BA6NC98 1476 aa13.62□□□□□ -0.23
RSL1D1-201ENST00000355674 PRDM2Q13029 1718 aa13.58□□□□□ -0.24
RSL1D1-201ENST00000355674 KIF21AQ7Z4S6 1674 aa13.56□□□□□ -0.24
RSL1D1-201ENST00000355674 LAMC3Q9Y6N6 1575 aa13.54□□□□□ -0.24
RSL1D1-201ENST00000355674 FKBP8Q14318 412 aa13.52□□□□□ -0.25
RSL1D1-201ENST00000355674 MIER1Q8N108 512 aa13.51□□□□□ -0.25
RSL1D1-201ENST00000355674 TSPYL2Q9H2G4 693 aaPredicted RBP13.51□□□□□ -0.25
RSL1D1-201ENST00000355674 CADPSQ9ULU8 1353 aa13.49□□□□□ -0.25
RSL1D1-201ENST00000355674 MS4A3Q96HJ5 214 aa13.49□□□□□ -0.25
RSL1D1-201ENST00000355674 PLEKHG5O94827 1062 aa13.48□□□□□ -0.25
RSL1D1-201ENST00000355674 CCDC61Q9Y6R9 512 aa13.47□□□□□ -0.25
RSL1D1-201ENST00000355674 CFTRP13569 1480 aa13.46□□□□□ -0.25
RSL1D1-201ENST00000355674 ERCC6Q03468 1493 aa13.43□□□□□ -0.26
RSL1D1-201ENST00000355674 RASEFQ8IZ41 740 aa13.42□□□□□ -0.26
RSL1D1-201ENST00000355674 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
RSL1D1-201ENST00000355674 PELP1Q8IZL8 1130 aaKnown RBP13.4□□□□□ -0.26
RSL1D1-201ENST00000355674 PDS5BQ9NTI5 1447 aa13.39□□□□□ -0.27
RSL1D1-201ENST00000355674 FANCD2Q9BXW9 1451 aa13.38□□□□□ -0.27
RSL1D1-201ENST00000355674 ASTLQ6HA08 431 aaPredicted RBP13.38□□□□□ -0.27
RSL1D1-201ENST00000355674 KIF12Q96FN5 646 aa13.38□□□□□ -0.27
RSL1D1-201ENST00000355674 THOC2Q8NI27 1593 aaKnown RBP13.35□□□□□ -0.27
RSL1D1-201ENST00000355674 ATMINO43313 823 aaPredicted RBP13.35□□□□□ -0.27
RSL1D1-201ENST00000355674 CEP164Q9UPV0 1460 aa13.34□□□□□ -0.27
RSL1D1-201ENST00000355674 POTEB2H3BUK9 544 aa13.33□□□□□ -0.28
RSL1D1-201ENST00000355674 ZBTB47Q9UFB7 747 aaPredicted RBP13.31□□□□□ -0.28
RSL1D1-201ENST00000355674 MAP3K13O43283 966 aa13.3□□□□□ -0.28
RSL1D1-201ENST00000355674 NUBP1P53384 320 aa13.29□□□□□ -0.28
RSL1D1-201ENST00000355674 METRNQ9UJH8 293 aa13.29□□□□□ -0.28
RSL1D1-201ENST00000355674 TRPC6Q9Y210 931 aa13.28□□□□□ -0.28
RSL1D1-201ENST00000355674 MRC2Q9UBG0 1479 aa13.28□□□□□ -0.28
RSL1D1-201ENST00000355674 URB2Q14146 1524 aaKnown RBP13.27□□□□□ -0.29
RSL1D1-201ENST00000355674 ATN1P54259 1190 aaPredicted RBP13.26□□□□□ -0.29
RSL1D1-201ENST00000355674 OTUD5Q96G74 571 aa13.26□□□□□ -0.29
RSL1D1-201ENST00000355674 ABCC8Q09428 1581 aa13.25□□□□□ -0.29
RSL1D1-201ENST00000355674 SLC39A7Q92504 469 aa13.25□□□□□ -0.29
RSL1D1-201ENST00000355674 BMP2KQ9NSY1 1161 aaPredicted RBP13.24□□□□□ -0.29
RSL1D1-201ENST00000355674 WDR62O43379 1518 aa13.23□□□□□ -0.29
RSL1D1-201ENST00000355674 C7P10643 843 aa13.23□□□□□ -0.29
RSL1D1-201ENST00000355674 DNMBPQ6XZF7 1577 aa13.2□□□□□ -0.3
RSL1D1-201ENST00000355674 FBXO3Q9UK99 471 aa13.2□□□□□ -0.3
RSL1D1-201ENST00000355674 TOPBP1Q92547 1522 aa13.2□□□□□ -0.3
RSL1D1-201ENST00000355674 TIE1P35590 1138 aa13.19□□□□□ -0.3
RSL1D1-201ENST00000355674 CUX1P39880 1505 aa13.19□□□□□ -0.3
RSL1D1-201ENST00000355674 FAM212AQ96EL1 285 aa13.18□□□□□ -0.3
RSL1D1-201ENST00000355674 CUX2O14529 1486 aa13.17□□□□□ -0.3
RSL1D1-201ENST00000355674 SYNJ1O43426 1573 aa13.16□□□□□ -0.3
RSL1D1-201ENST00000355674 POTEJP0CG39 1038 aa13.16□□□□□ -0.3
RSL1D1-201ENST00000355674 PCDHB13Q9Y5F0 798 aa13.16□□□□□ -0.3
RSL1D1-201ENST00000355674 SGIP1Q9BQI5 828 aa13.15□□□□□ -0.3
RSL1D1-201ENST00000355674 BIVM-ERCC5R4GMW8 1640 aa13.14□□□□□ -0.31
RSL1D1-201ENST00000355674 TTLL13PA6NNM8 815 aa13.13□□□□□ -0.31
RSL1D1-201ENST00000355674 TOP2BQ02880 1626 aa13.11□□□□□ -0.31
RSL1D1-201ENST00000355674 WRNQ14191 1432 aaPredicted RBP eCLIP13.11□□□□□ -0.31
RSL1D1-201ENST00000355674 POTEFA5A3E0 1075 aa13.11□□□□□ -0.31
RSL1D1-201ENST00000355674 IFNL1Q8IU54 200 aa13.11□□□□□ -0.31
RSL1D1-201ENST00000355674 FGD5Q6ZNL6 1462 aa13.1□□□□□ -0.31
RSL1D1-201ENST00000355674 TARBP1Q13395 1621 aaKnown RBP13.09□□□□□ -0.31
RSL1D1-201ENST00000355674 VASPP50552 380 aaPredicted RBP13.09□□□□□ -0.31
RSL1D1-201ENST00000355674 POLA1P09884 1462 aaPredicted RBP13.08□□□□□ -0.31
RSL1D1-201ENST00000355674 RAD54L2Q9Y4B4 1467 aa13.08□□□□□ -0.31
RSL1D1-201ENST00000355674 WDR97A6NE52 1622 aa13.05□□□□□ -0.32
RSL1D1-201ENST00000355674 DCAF8Q5TAQ9 597 aa13.05□□□□□ -0.32
RSL1D1-201ENST00000355674 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
RSL1D1-201ENST00000355674 SOGA1O94964 1423 aa13.04□□□□□ -0.32
RSL1D1-201ENST00000355674 ZNF608Q9ULD9 1512 aaPredicted RBP13.04□□□□□ -0.32
RSL1D1-201ENST00000355674 MAMSTRQ6ZN01 415 aa13.04□□□□□ -0.32
RSL1D1-201ENST00000355674 COLQQ9Y215 455 aaPredicted RBP13.03□□□□□ -0.32
RSL1D1-201ENST00000355674 PYGBP11216 843 aa13.02□□□□□ -0.33
RSL1D1-201ENST00000355674 IFT140Q96RY7 1462 aa13.02□□□□□ -0.33
RSL1D1-201ENST00000355674 EIF4G3O43432 1585 aaKnown RBP13□□□□□ -0.33
RSL1D1-201ENST00000355674 TMEM106CQ9BVX2 250 aa13□□□□□ -0.33
RSL1D1-201ENST00000355674 PBRM1Q86U86 1689 aa12.99□□□□□ -0.33
RSL1D1-201ENST00000355674 IER5LQ5T953 404 aa12.99□□□□□ -0.33
RSL1D1-201ENST00000355674 KLHL34Q8N239 644 aa12.99□□□□□ -0.33
RSL1D1-201ENST00000355674 SEC24BO95487 1268 aa12.98□□□□□ -0.33
RSL1D1-201ENST00000355674 SCUBE2Q9NQ36 999 aa12.98□□□□□ -0.33
RSL1D1-201ENST00000355674 AQRO60306 1485 aaKnown RBP eCLIP12.98□□□□□ -0.333e-7■■■■□ 23.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms