RNA–Protein interactions for RNA: ENST00000355327.7

THSD4-202, Transcript of thrombospondin type 1 domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene THSD4, Length 9,200 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-202ENST00000355327 MYH16Q9H6N6 1097 aa18.39■□□□□ 0.53
THSD4-202ENST00000355327 NOC3LQ8WTT2 800 aaKnown RBP18.38■□□□□ 0.53
THSD4-202ENST00000355327 LAS1LQ9Y4W2 734 aaKnown RBP18.37■□□□□ 0.53
THSD4-202ENST00000355327 TPRNQ4KMQ1 711 aa18.35■□□□□ 0.53
THSD4-202ENST00000355327 PNNQ9H307 717 aaKnown RBP18.35■□□□□ 0.53
THSD4-202ENST00000355327 TRIM52Q96A61 297 aa18.34■□□□□ 0.53
THSD4-202ENST00000355327 FAM50AQ14320 339 aaKnown RBP18.31■□□□□ 0.52
THSD4-202ENST00000355327 RSPH6AQ9H0K4 717 aa18.3■□□□□ 0.52
THSD4-202ENST00000355327 DRC7Q8IY82 874 aa18.3■□□□□ 0.52
THSD4-202ENST00000355327 TULP1O00294 542 aaPredicted RBP18.26■□□□□ 0.51
THSD4-202ENST00000355327 USP35Q9P2H5 1018 aa18.26■□□□□ 0.51
THSD4-202ENST00000355327 STK11IPQ8N1F8 1099 aa18.25■□□□□ 0.51
THSD4-202ENST00000355327 CASC1Q6TDU7 716 aa18.25■□□□□ 0.51
THSD4-202ENST00000355327 KIAA2012Q0VF49 1180 aa18.24■□□□□ 0.51
THSD4-202ENST00000355327 PKNOX2Q96KN3 472 aa18.24■□□□□ 0.51
THSD4-202ENST00000355327 FAM9BQ8IZU0 186 aa18.2■□□□□ 0.5
THSD4-202ENST00000355327 GOLGA6L4A6NEF3 574 aa18.2■□□□□ 0.5
THSD4-202ENST00000355327 MEX3CQ5U5Q3 659 aaKnown RBP18.2■□□□□ 0.5
THSD4-202ENST00000355327 LOC105371045A0A1W2PR82 267 aa18.2■□□□□ 0.5
THSD4-202ENST00000355327 IRX6P78412 446 aaPredicted RBP18.17■□□□□ 0.5
THSD4-202ENST00000355327 ZBTB7CA1YPR0 619 aa18.15■□□□□ 0.5
THSD4-202ENST00000355327 NCBP3Q53F19 620 aaKnown RBP18.15■□□□□ 0.5
THSD4-202ENST00000355327 ZNF771Q7L3S4 317 aaPredicted RBP18.15■□□□□ 0.5
THSD4-202ENST00000355327 GOLGA6L3A6NEY3 463 aa18.1■□□□□ 0.49
THSD4-202ENST00000355327 HSP90AB1P08238 724 aaKnown RBP18.1■□□□□ 0.49
THSD4-202ENST00000355327 SALL2Q9Y467 1007 aaPredicted RBP18.1■□□□□ 0.49
THSD4-202ENST00000355327 PATL2C9JE40 543 aaKnown RBP18.08■□□□□ 0.48
THSD4-202ENST00000355327 TAF7LQ5H9L4 462 aa18.07■□□□□ 0.48
THSD4-202ENST00000355327 NOM1Q5C9Z4 860 aaKnown RBP18.07■□□□□ 0.48
THSD4-202ENST00000355327 RRP12Q5JTH9 1297 aaKnown RBP18.06■□□□□ 0.48
THSD4-202ENST00000355327 WDR43Q15061 677 aaKnown RBP eCLIP18.05■□□□□ 0.48
THSD4-202ENST00000355327 TMC1Q8TDI8 760 aa18.04■□□□□ 0.48
THSD4-202ENST00000355327 NEFHP12036 1026 aa17.98■□□□□ 0.47
THSD4-202ENST00000355327 PRM3Q9NNZ6 103 aa17.97■□□□□ 0.47
THSD4-202ENST00000355327 CLSTN1O94985 981 aa17.97■□□□□ 0.47
THSD4-202ENST00000355327 HSCBQ8IWL3 235 aa17.97■□□□□ 0.47
THSD4-202ENST00000355327 TEX35Q5T0J7 233 aa17.96■□□□□ 0.46
THSD4-202ENST00000355327 CSRNP3Q8WYN3 585 aa17.95■□□□□ 0.46
THSD4-202ENST00000355327 PRKCSHP14314 528 aaPredicted RBP17.95■□□□□ 0.46
THSD4-202ENST00000355327 TIMELESSQ9UNS1 1208 aa17.94■□□□□ 0.46
THSD4-202ENST00000355327 GPS2Q13227 327 aa17.93■□□□□ 0.46
THSD4-202ENST00000355327 HTATSF1O43719 755 aaKnown RBP17.93■□□□□ 0.46
THSD4-202ENST00000355327 MAP7D2Q96T17 732 aa17.9■□□□□ 0.46
THSD4-202ENST00000355327 SYAP1Q96A49 352 aaPredicted RBP17.89■□□□□ 0.45
THSD4-202ENST00000355327 DDX10Q13206 875 aaKnown RBP17.88■□□□□ 0.45
THSD4-202ENST00000355327 GZF1Q9H116 711 aaPredicted RBP17.88■□□□□ 0.45
THSD4-202ENST00000355327 FGD1P98174 961 aa17.88■□□□□ 0.45
THSD4-202ENST00000355327 MRS2Q9HD23 443 aa17.87■□□□□ 0.45
THSD4-202ENST00000355327 GBP4Q96PP9 640 aa17.87■□□□□ 0.45
THSD4-202ENST00000355327 TAOK2Q9UL54 1235 aa17.86■□□□□ 0.45
THSD4-202ENST00000355327 RDXP35241 583 aaKnown RBP17.86■□□□□ 0.45
THSD4-202ENST00000355327 TONSLQ96HA7 1378 aa17.86■□□□□ 0.45
THSD4-202ENST00000355327 FTSJ3Q8IY81 847 aaKnown RBP17.83■□□□□ 0.45
THSD4-202ENST00000355327 HAP1P54257 671 aaPredicted RBP17.82■□□□□ 0.44
THSD4-202ENST00000355327 HMMRO75330 724 aa17.82■□□□□ 0.44
THSD4-202ENST00000355327 CCDC191Q8NCU4 936 aa17.81■□□□□ 0.44
THSD4-202ENST00000355327 TPM4P67936 248 aa17.8■□□□□ 0.44
THSD4-202ENST00000355327 CWC15Q9P013 229 aaKnown RBP17.8■□□□□ 0.44
THSD4-202ENST00000355327 RGS3P49796 1198 aa17.78■□□□□ 0.44
THSD4-202ENST00000355327 NAP1L2Q9ULW6 460 aaPredicted RBP17.78■□□□□ 0.44
THSD4-202ENST00000355327 SPRYD3Q8NCJ5 442 aa17.77■□□□□ 0.44
THSD4-202ENST00000355327 CCDC66A2RUB6 948 aa17.77■□□□□ 0.43
THSD4-202ENST00000355327 CALD1Q05682 793 aaKnown RBP17.77■□□□□ 0.43
THSD4-202ENST00000355327 HSP90B1P14625 803 aaKnown RBP17.76■□□□□ 0.43
THSD4-202ENST00000355327 CCDC70Q6NSX1 233 aa17.75■□□□□ 0.43
THSD4-202ENST00000355327 FAM13BQ9NYF5 915 aa17.75■□□□□ 0.43
THSD4-202ENST00000355327 PHF14O94880 888 aa17.75■□□□□ 0.43
THSD4-202ENST00000355327 PPP4R2Q9NY27 417 aa17.75■□□□□ 0.43
THSD4-202ENST00000355327 DYDC1Q8WWB3 177 aa17.75■□□□□ 0.43
THSD4-202ENST00000355327 KCNJ4P48050 445 aa17.74■□□□□ 0.43
THSD4-202ENST00000355327 PDE4CQ08493 712 aa17.74■□□□□ 0.43
THSD4-202ENST00000355327 GNL2Q13823 731 aaKnown RBP17.74■□□□□ 0.43
THSD4-202ENST00000355327 RBM19Q9Y4C8 960 aaKnown RBP17.73■□□□□ 0.43
THSD4-202ENST00000355327 TPM3P06753 285 aa17.73■□□□□ 0.43
THSD4-202ENST00000355327 SUPT16HQ9Y5B9 1047 aaKnown RBP17.72■□□□□ 0.43
THSD4-202ENST00000355327 HSP90AB3PQ58FF7 597 aa17.72■□□□□ 0.43
THSD4-202ENST00000355327 H0YHG0 523 aa17.71■□□□□ 0.43
THSD4-202ENST00000355327 MIER1Q8N108 512 aa17.71■□□□□ 0.43
THSD4-202ENST00000355327 MCCP23508 829 aa17.7■□□□□ 0.42
THSD4-202ENST00000355327 MTERF4Q7Z6M4 381 aaKnown RBP17.7■□□□□ 0.42
THSD4-202ENST00000355327 CCAR2Q8N163 923 aaKnown RBP17.69■□□□□ 0.42
THSD4-202ENST00000355327 PLCD4Q9BRC7 762 aa17.68■□□□□ 0.42
THSD4-202ENST00000355327 FBXO3Q9UK99 471 aa17.66■□□□□ 0.42
THSD4-202ENST00000355327 CEP89Q96ST8 783 aa17.64■□□□□ 0.41
THSD4-202ENST00000355327 DCTN1Q14203 1278 aa17.62■□□□□ 0.41
THSD4-202ENST00000355327 AK7Q96M32 723 aa17.61■□□□□ 0.41
THSD4-202ENST00000355327 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.61■□□□□ 0.41
THSD4-202ENST00000355327 TAF3Q5VWG9 929 aa17.6■□□□□ 0.41
THSD4-202ENST00000355327 CCDC34Q96HJ3 373 aa17.59■□□□□ 0.41
THSD4-202ENST00000355327 SLKQ9H2G2 1235 aaPredicted RBP17.58■□□□□ 0.41
THSD4-202ENST00000355327 CFAP44Q96MT7 982 aa17.58■□□□□ 0.41
THSD4-202ENST00000355327 CHMP4BQ9H444 224 aaKnown RBP17.58■□□□□ 0.4
THSD4-202ENST00000355327 ZNF526Q8TF50 670 aaPredicted RBP17.58■□□□□ 0.4
THSD4-202ENST00000355327 RUFY1Q96T51 708 aa17.58■□□□□ 0.4
THSD4-202ENST00000355327 CSPP1Q1MSJ5 1256 aa17.57■□□□□ 0.4
THSD4-202ENST00000355327 INCENPQ9NQS7 918 aa17.56■□□□□ 0.4
THSD4-202ENST00000355327 HSP90B2PQ58FF3 399 aa17.55■□□□□ 0.4
THSD4-202ENST00000355327 DEF6Q9H4E7 631 aa17.55■□□□□ 0.4
THSD4-202ENST00000355327 CDR1P51861 262 aa17.55■□□□□ 0.4
THSD4-202ENST00000355327 B4GALNT3Q6L9W6 998 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms