RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 SAMD9Q5K651 1589 aa26.96■■□□□ 1.91
VPS13B-201ENST00000355155 PCGF6Q9BYE7 350 aa26.94■■□□□ 1.9
VPS13B-201ENST00000355155 MAP3K1Q13233 1512 aa26.93■■□□□ 1.9
VPS13B-201ENST00000355155 MAGI1Q96QZ7 1491 aaPredicted RBP26.92■■□□□ 1.9
VPS13B-201ENST00000355155 SNAPC4Q5SXM2 1469 aa26.82■■□□□ 1.88
VPS13B-201ENST00000355155 IQGAP2Q13576 1575 aa26.79■■□□□ 1.88
VPS13B-201ENST00000355155 UGGT2Q9NYU1 1516 aa26.77■■□□□ 1.88
VPS13B-201ENST00000355155 GRIN2AQ12879 1464 aa26.77■■□□□ 1.88
VPS13B-201ENST00000355155 SYNJ2O15056 1496 aa26.76■■□□□ 1.87
VPS13B-201ENST00000355155 CFAP43Q8NDM7 1665 aa26.76■■□□□ 1.87
VPS13B-201ENST00000355155 FYCO1Q9BQS8 1478 aa26.72■■□□□ 1.87
VPS13B-201ENST00000355155 KIAA0586Q9BVV6 1533 aa26.71■■□□□ 1.87
VPS13B-201ENST00000355155 TIAM1Q13009 1591 aa26.71■■□□□ 1.87
VPS13B-201ENST00000355155 PCF11O94913 1555 aaKnown RBP26.7■■□□□ 1.87
VPS13B-201ENST00000355155 CASKIN1Q8WXD9 1431 aa26.69■■□□□ 1.86
VPS13B-201ENST00000355155 FMN1Q68DA7 1419 aa26.68■■□□□ 1.86
VPS13B-201ENST00000355155 NUP160Q12769 1436 aa26.65■■□□□ 1.86
VPS13B-201ENST00000355155 FHOD3Q2V2M9 1422 aa26.62■■□□□ 1.85
VPS13B-201ENST00000355155 CEP170Q5SW79 1584 aa26.62■■□□□ 1.85
VPS13B-201ENST00000355155 APLP2Q06481 763 aa26.6■■□□□ 1.85
VPS13B-201ENST00000355155 RANGAP1P46060 587 aaPredicted RBP26.58■■□□□ 1.85
VPS13B-201ENST00000355155 KIAA0556O60303 1618 aa26.55■■□□□ 1.84
VPS13B-201ENST00000355155 HRCP23327 699 aa26.55■■□□□ 1.84
VPS13B-201ENST00000355155 PPARGC1BQ86YN6 1023 aaKnown RBP26.55■■□□□ 1.84
VPS13B-201ENST00000355155 LRRC9Q6ZRR7 1453 aa26.53■■□□□ 1.84
VPS13B-201ENST00000355155 LRRIQ1Q96JM4 1722 aa26.52■■□□□ 1.84
VPS13B-201ENST00000355155 DISP1Q96F81 1524 aa26.52■■□□□ 1.84
VPS13B-201ENST00000355155 RRBP1Q9P2E9 1410 aaKnown RBP26.5■■□□□ 1.83
VPS13B-201ENST00000355155 HECW1Q76N89 1606 aa26.45■■□□□ 1.83
VPS13B-201ENST00000355155 KANK4Q5T7N3 995 aaPredicted RBP26.45■■□□□ 1.82
VPS13B-201ENST00000355155 CCDC18Q5T9S5 1454 aa26.42■■□□□ 1.82
VPS13B-201ENST00000355155 CHD1O14646 1710 aa26.42■■□□□ 1.82
VPS13B-201ENST00000355155 CHMP7Q8WUX9 453 aaPredicted RBP26.39■■□□□ 1.82
VPS13B-201ENST00000355155 SHROOM2Q13796 1616 aa26.37■■□□□ 1.81
VPS13B-201ENST00000355155 P3H3Q8IVL6 736 aa26.35■■□□□ 1.81
VPS13B-201ENST00000355155 EHBP1L1Q8N3D4 1523 aa26.33■■□□□ 1.81
VPS13B-201ENST00000355155 ARHGEF11O15085 1522 aa26.31■■□□□ 1.8
VPS13B-201ENST00000355155 RAPGEF6Q8TEU7 1601 aa26.3■■□□□ 1.8
VPS13B-201ENST00000355155 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.29■■□□□ 1.8
VPS13B-201ENST00000355155 EPRSP07814 1512 aaKnown RBP26.27■■□□□ 1.8
VPS13B-201ENST00000355155 CARMIL2Q6F5E8 1435 aa26.26■■□□□ 1.8
VPS13B-201ENST00000355155 SUPT6HQ7KZ85 1726 aaKnown RBP26.24■■□□□ 1.79
VPS13B-201ENST00000355155 ZEB1P37275 1124 aaPredicted RBP26.24■■□□□ 1.79
VPS13B-201ENST00000355155 CCNB3Q8WWL7 1395 aa26.24■■□□□ 1.79
VPS13B-201ENST00000355155 CLASP1Q7Z460 1538 aa26.23■■□□□ 1.79
VPS13B-201ENST00000355155 TTBK1Q5TCY1 1321 aaPredicted RBP26.2■■□□□ 1.78
VPS13B-201ENST00000355155 ABCA8O94911 1581 aa26.2■■□□□ 1.78
VPS13B-201ENST00000355155 MAGI3Q5TCQ9 1506 aa26.2■■□□□ 1.78
VPS13B-201ENST00000355155 PHLDB1Q86UU1 1377 aa26.19■■□□□ 1.78
VPS13B-201ENST00000355155 JPH4Q96JJ6 628 aa26.19■■□□□ 1.78
VPS13B-201ENST00000355155 NUP153P49790 1475 aaKnown RBP26.19■■□□□ 1.78
VPS13B-201ENST00000355155 NCOA2Q15596 1464 aa26.11■■□□□ 1.77
VPS13B-201ENST00000355155 ADCY10Q96PN6 1610 aa26.11■■□□□ 1.77
VPS13B-201ENST00000355155 MTUS2Q5JR59 1369 aa26.1■■□□□ 1.77
VPS13B-201ENST00000355155 CDK13Q14004 1512 aaKnown RBP26.09■■□□□ 1.77
VPS13B-201ENST00000355155 FBLN2P98095 1184 aa26.08■■□□□ 1.77
VPS13B-201ENST00000355155 FGD6Q6ZV73 1430 aa26.06■■□□□ 1.76
VPS13B-201ENST00000355155 TCOF1Q13428 1488 aaKnown RBP26.06■■□□□ 1.76
VPS13B-201ENST00000355155 MYOM3Q5VTT5 1437 aa26.05■■□□□ 1.76
VPS13B-201ENST00000355155 PRG4Q92954 1404 aaPredicted RBP26.05■■□□□ 1.76
VPS13B-201ENST00000355155 PLB1Q6P1J6 1458 aa26.02■■□□□ 1.76
VPS13B-201ENST00000355155 MIA2Q96PC5 1412 aa25.99■■□□□ 1.75
VPS13B-201ENST00000355155 ATP1B4Q9UN42 357 aaPredicted RBP25.98■■□□□ 1.75
VPS13B-201ENST00000355155 PTPN23Q9H3S7 1636 aa25.97■■□□□ 1.75
VPS13B-201ENST00000355155 TROQ12816 1431 aaPredicted RBP25.95■■□□□ 1.74
VPS13B-201ENST00000355155 HNRNPUL2Q1KMD3 747 aaKnown RBP25.92■■□□□ 1.74
VPS13B-201ENST00000355155 PTPRGP23470 1445 aa25.91■■□□□ 1.74
VPS13B-201ENST00000355155 ATP10BO94823 1461 aa25.9■■□□□ 1.74
VPS13B-201ENST00000355155 ITSN2Q9NZM3 1697 aa25.89■■□□□ 1.74
VPS13B-201ENST00000355155 UHRF1BP1LA0JNW5 1464 aa25.89■■□□□ 1.74
VPS13B-201ENST00000355155 CLSPNQ9HAW4 1339 aa25.88■■□□□ 1.73
VPS13B-201ENST00000355155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.88■■□□□ 1.73
VPS13B-201ENST00000355155 ERCC6L2Q5T890 1561 aa25.88■■□□□ 1.73
VPS13B-201ENST00000355155 CDK11AQ9UQ88 783 aaPredicted RBP25.87■■□□□ 1.73
VPS13B-201ENST00000355155 ABCC2Q92887 1545 aa25.87■■□□□ 1.73
VPS13B-201ENST00000355155 UACAQ9BZF9 1416 aa25.86■■□□□ 1.73
VPS13B-201ENST00000355155 CCER1Q8TC90 406 aaPredicted RBP25.84■■□□□ 1.73
VPS13B-201ENST00000355155 AKNAQ7Z591 1439 aa25.82■■□□□ 1.72
VPS13B-201ENST00000355155 SETD5Q9C0A6 1442 aa25.81■■□□□ 1.72
VPS13B-201ENST00000355155 KIF14Q15058 1648 aa25.8■■□□□ 1.72
VPS13B-201ENST00000355155 ABCC10Q5T3U5 1492 aa25.8■■□□□ 1.72
VPS13B-201ENST00000355155 DHX57Q6P158 1386 aaKnown RBP25.78■■□□□ 1.72
VPS13B-201ENST00000355155 GCC2Q8IWJ2 1684 aa25.77■■□□□ 1.72
VPS13B-201ENST00000355155 DNMT1P26358 1616 aaKnown RBP25.76■■□□□ 1.71
VPS13B-201ENST00000355155 HFM1A2PYH4 1435 aa25.75■■□□□ 1.71
VPS13B-201ENST00000355155 PTPRKQ15262 1439 aa25.74■■□□□ 1.71
VPS13B-201ENST00000355155 CDC42BPAQ5VT25 1732 aa25.74■■□□□ 1.71
VPS13B-201ENST00000355155 GPATCH8Q9UKJ3 1502 aaKnown RBP25.73■■□□□ 1.71
VPS13B-201ENST00000355155 RAB3GAP2Q9H2M9 1393 aa25.72■■□□□ 1.71
VPS13B-201ENST00000355155 KDM5BQ9UGL1 1544 aa25.72■■□□□ 1.71
VPS13B-201ENST00000355155 FAM50AQ14320 339 aaKnown RBP25.7■■□□□ 1.71
VPS13B-201ENST00000355155 CROCC2H7BZ55 1655 aa25.68■■□□□ 1.7
VPS13B-201ENST00000355155 ZCCHC11Q5TAX3 1644 aaKnown RBP25.67■■□□□ 1.7
VPS13B-201ENST00000355155 ROCK1Q13464 1354 aa25.65■■□□□ 1.7
VPS13B-201ENST00000355155 PREX2Q70Z35 1606 aa25.65■■□□□ 1.7
VPS13B-201ENST00000355155 NAIPQ13075 1403 aa25.64■■□□□ 1.69
VPS13B-201ENST00000355155 PLEKHD1A6NEE1 506 aa25.63■■□□□ 1.69
VPS13B-201ENST00000355155 CAMSAP2Q08AD1 1489 aa25.62■■□□□ 1.69
VPS13B-201ENST00000355155 DAPK1P53355 1430 aa25.61■■□□□ 1.69
VPS13B-201ENST00000355155 ADGBQ8N7X0 1667 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms