RNA–Protein interactions for RNA: ENST00000354371.6

COPS8-201, Transcript of COP9 signalosome subunit 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS8, Length 4,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS8-201ENST00000354371 RTN4Q9NQC3 1192 aaKnown RBP15.72■□□□□ 0.11
COPS8-201ENST00000354371 CDK11AQ9UQ88 783 aaPredicted RBP15.71■□□□□ 0.11
COPS8-201ENST00000354371 WASHC2AQ641Q2 1341 aa15.71■□□□□ 0.11
COPS8-201ENST00000354371 KIF21BO75037 1637 aa15.69■□□□□ 0.1
COPS8-201ENST00000354371 EEA1Q15075 1411 aa15.68■□□□□ 0.1
COPS8-201ENST00000354371 CCER2I3L3R5 266 aa15.68■□□□□ 0.1
COPS8-201ENST00000354371 ANP32CO43423 234 aa15.68■□□□□ 0.1
COPS8-201ENST00000354371 IRX6P78412 446 aaPredicted RBP15.67■□□□□ 0.1
COPS8-201ENST00000354371 DDX10Q13206 875 aaKnown RBP15.66■□□□□ 0.1
COPS8-201ENST00000354371 C11orf95C9JLR9 678 aaPredicted RBP15.64■□□□□ 0.09
COPS8-201ENST00000354371 ZNF326Q5BKZ1 582 aaKnown RBP15.63■□□□□ 0.09
COPS8-201ENST00000354371 HIRIP3Q9BW71 556 aaPredicted RBP15.63■□□□□ 0.09
COPS8-201ENST00000354371 WASHC2CQ9Y4E1 1318 aa15.62■□□□□ 0.09
COPS8-201ENST00000354371 RRBP1Q9P2E9 1410 aaKnown RBP15.62■□□□□ 0.09
COPS8-201ENST00000354371 NCAPD3P42695 1498 aa15.58■□□□□ 0.09
COPS8-201ENST00000354371 PKNOX2Q96KN3 472 aa15.58■□□□□ 0.08
COPS8-201ENST00000354371 ZNF777Q9ULD5 760 aaPredicted RBP15.57■□□□□ 0.08
COPS8-201ENST00000354371 SMARCA2P51531 1590 aa15.55■□□□□ 0.08
COPS8-201ENST00000354371 PPP4R2Q9NY27 417 aa15.54■□□□□ 0.08
COPS8-201ENST00000354371 CEP164Q9UPV0 1460 aa15.53■□□□□ 0.08
COPS8-201ENST00000354371 IPO9Q96P70 1041 aaKnown RBP15.52■□□□□ 0.07
COPS8-201ENST00000354371 CHIC2Q9UKJ5 165 aa15.52■□□□□ 0.07
COPS8-201ENST00000354371 BAZ1BQ9UIG0 1483 aaKnown RBP15.51■□□□□ 0.07
COPS8-201ENST00000354371 PEG3Q9GZU2 1588 aa15.51■□□□□ 0.07
COPS8-201ENST00000354371 B4GALNT3Q6L9W6 998 aa15.5■□□□□ 0.07
COPS8-201ENST00000354371 NPM2Q86SE8 214 aaKnown RBP15.49■□□□□ 0.07
COPS8-201ENST00000354371 HNRNPUQ00839 825 aaKnown RBP eCLIP15.48■□□□□ 0.07
COPS8-201ENST00000354371 TOP2AP11388 1531 aaKnown RBP15.48■□□□□ 0.07
COPS8-201ENST00000354371 KANK4Q5T7N3 995 aaPredicted RBP15.48■□□□□ 0.07
COPS8-201ENST00000354371 EIF5BO60841 1220 aaKnown RBP15.48■□□□□ 0.07
COPS8-201ENST00000354371 BRPF3Q9ULD4 1205 aa15.47■□□□□ 0.07
COPS8-201ENST00000354371 SYNJ1O43426 1573 aa15.47■□□□□ 0.07
COPS8-201ENST00000354371 RAPGEF2Q9Y4G8 1499 aa15.46■□□□□ 0.07
COPS8-201ENST00000354371 ARAP1Q96P48 1450 aa15.46■□□□□ 0.07
COPS8-201ENST00000354371 SENP3-EIF4A1A0A087X0R7 540 aa15.46■□□□□ 0.07
COPS8-201ENST00000354371 SLC4A1APQ9BWU0 796 aaKnown RBP15.45■□□□□ 0.06
COPS8-201ENST00000354371 RAB3GAP2Q9H2M9 1393 aa15.44■□□□□ 0.06
COPS8-201ENST00000354371 PLEKHG5O94827 1062 aa15.41■□□□□ 0.06
COPS8-201ENST00000354371 FAM9BQ8IZU0 186 aa15.39■□□□□ 0.05
COPS8-201ENST00000354371 KDM5BQ9UGL1 1544 aa15.38■□□□□ 0.05
COPS8-201ENST00000354371 SIN3AQ96ST3 1273 aa15.38■□□□□ 0.05
COPS8-201ENST00000354371 ANP32AP39687 249 aaKnown RBP15.36■□□□□ 0.05
COPS8-201ENST00000354371 CCDC184Q52MB2 194 aa15.36■□□□□ 0.05
COPS8-201ENST00000354371 TIMELESSQ9UNS1 1208 aa15.34■□□□□ 0.05
COPS8-201ENST00000354371 CCNB3Q8WWL7 1395 aa15.34■□□□□ 0.05
COPS8-201ENST00000354371 USP35Q9P2H5 1018 aa15.34■□□□□ 0.05
COPS8-201ENST00000354371 ZBTB47Q9UFB7 747 aaPredicted RBP15.33■□□□□ 0.04
COPS8-201ENST00000354371 RNF123Q5XPI4 1314 aa15.32■□□□□ 0.04
COPS8-201ENST00000354371 SENP3Q9H4L4 574 aaPredicted RBP15.3■□□□□ 0.04
COPS8-201ENST00000354371 ZMYND15Q9H091 742 aa15.3■□□□□ 0.04
COPS8-201ENST00000354371 CHMP7Q8WUX9 453 aaPredicted RBP15.29■□□□□ 0.04
COPS8-201ENST00000354371 RRP7BPQ9NSQ0 103 aa15.29■□□□□ 0.04
COPS8-201ENST00000354371 NEFMP07197 916 aa15.29■□□□□ 0.04
COPS8-201ENST00000354371 AKNAQ7Z591 1439 aa15.26■□□□□ 0.03
COPS8-201ENST00000354371 DCAF11Q8TEB1 546 aa15.26■□□□□ 0.03
COPS8-201ENST00000354371 RSPH6AQ9H0K4 717 aa15.25■□□□□ 0.03
COPS8-201ENST00000354371 LAS1LQ9Y4W2 734 aaKnown RBP15.25■□□□□ 0.03
COPS8-201ENST00000354371 NCOA2Q15596 1464 aa15.25■□□□□ 0.03
COPS8-201ENST00000354371 SETD5Q9C0A6 1442 aa15.24■□□□□ 0.03
COPS8-201ENST00000354371 GSE1Q14687 1217 aa15.23■□□□□ 0.03
COPS8-201ENST00000354371 ZBED9Q6R2W3 1325 aa15.23■□□□□ 0.03
COPS8-201ENST00000354371 TONSLQ96HA7 1378 aa15.22■□□□□ 0.03
COPS8-201ENST00000354371 MTUS2Q5JR59 1369 aa15.21■□□□□ 0.03
COPS8-201ENST00000354371 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.21■□□□□ 0.03
COPS8-201ENST00000354371 SMARCA4P51532 1647 aa15.21■□□□□ 0.03
COPS8-201ENST00000354371 TDRD9Q8NDG6 1382 aaKnown RBP15.2■□□□□ 0.02
COPS8-201ENST00000354371 FRAT1Q92837 279 aaPredicted RBP15.2■□□□□ 0.02
COPS8-201ENST00000354371 KIF27Q86VH2 1401 aa15.19■□□□□ 0.02
COPS8-201ENST00000354371 FAM43AQ8N2R8 423 aa15.19■□□□□ 0.02
COPS8-201ENST00000354371 SMG6Q86US8 1419 aaKnown RBP15.18■□□□□ 0.02
COPS8-201ENST00000354371 PODXL2Q9NZ53 605 aa15.18■□□□□ 0.02
COPS8-201ENST00000354371 ERICH3Q5RHP9 1530 aa15.18■□□□□ 0.02
COPS8-201ENST00000354371 PLPPR3Q6T4P5 718 aa15.17■□□□□ 0.02
COPS8-201ENST00000354371 MRS2Q9HD23 443 aa15.17■□□□□ 0.02
COPS8-201ENST00000354371 ARXQ96QS3 562 aa15.16■□□□□ 0.02
COPS8-201ENST00000354371 PRXQ9BXM0 1461 aa15.15■□□□□ 0.02
COPS8-201ENST00000354371 FHAD1B1AJZ9 1412 aa15.14■□□□□ 0.01
COPS8-201ENST00000354371 KDM2AQ9Y2K7 1162 aa15.13■□□□□ 0.01
COPS8-201ENST00000354371 ATAD2BQ9ULI0 1458 aa15.13■□□□□ 0.01
COPS8-201ENST00000354371 RRAGDQ9NQL2 400 aaPredicted RBP15.13■□□□□ 0.01
COPS8-201ENST00000354371 NFKBIBQ15653 356 aa15.12■□□□□ 0.01
COPS8-201ENST00000354371 VSIG10Q8N0Z9 540 aa15.12■□□□□ 0.01
COPS8-201ENST00000354371 CARMIL1Q5VZK9 1371 aa15.11■□□□□ 0.01
COPS8-201ENST00000354371 BACH2Q9BYV9 841 aa15.11■□□□□ 0.01
COPS8-201ENST00000354371 DNAJC5BQ9UF47 199 aa15.11■□□□□ 0.01
COPS8-201ENST00000354371 TIAM1Q13009 1591 aa15.1■□□□□ 0.01
COPS8-201ENST00000354371 ARHGAP35Q9NRY4 1499 aa15.1■□□□□ 0.01
COPS8-201ENST00000354371 CNTLNQ9NXG0 1405 aa15.09■□□□□ 0.01
COPS8-201ENST00000354371 POLR1AO95602 1720 aaPredicted RBP15.09■□□□□ 0.01
COPS8-201ENST00000354371 PHLDB1Q86UU1 1377 aa15.08■□□□□ 0.01
COPS8-201ENST00000354371 ABCA5Q8WWZ7 1642 aa15.08■□□□□ 0
COPS8-201ENST00000354371 PPM1GO15355 546 aaPredicted RBP15.08■□□□□ 0
COPS8-201ENST00000354371 CHGAP10645 457 aaKnown RBP15.08■□□□□ 0
COPS8-201ENST00000354371 PDE4AP27815 886 aa15.07■□□□□ 0
COPS8-201ENST00000354371 MAP3K1Q13233 1512 aa15.07■□□□□ 0
COPS8-201ENST00000354371 PRKRIP1Q9H875 184 aaPredicted RBP15.06■□□□□ 0
COPS8-201ENST00000354371 CANXP27824 592 aaKnown RBP15.06■□□□□ 0
COPS8-201ENST00000354371 TMC1Q8TDI8 760 aa15.04■□□□□ -0
COPS8-201ENST00000354371 SLC24A1O60721 1099 aa15.04■□□□□ -0
COPS8-201ENST00000354371 TOP2BQ02880 1626 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms