RNA–Protein interactions for RNA: ENST00000354185.8

DDX21-201, Transcript of DExD-box helicase 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX21, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX21-201ENST00000354185 VPS8Q8N3P4 1428 aa11.95□□□□□ -0.5
DDX21-201ENST00000354185 URB2Q14146 1524 aaKnown RBP11.93□□□□□ -0.5
DDX21-201ENST00000354185 DNMBPQ6XZF7 1577 aa11.91□□□□□ -0.5
DDX21-201ENST00000354185 NPM1P06748 294 aaKnown RBP eCLIP11.91□□□□□ -0.5
DDX21-201ENST00000354185 JPH4Q96JJ6 628 aa11.91□□□□□ -0.5
DDX21-201ENST00000354185 PLEKHD1A6NEE1 506 aa11.89□□□□□ -0.51
DDX21-201ENST00000354185 RRP7BPQ9NSQ0 103 aa11.88□□□□□ -0.51
DDX21-201ENST00000354185 FHAD1B1AJZ9 1412 aa11.87□□□□□ -0.51
DDX21-201ENST00000354185 PRXQ9BXM0 1461 aa11.85□□□□□ -0.51
DDX21-201ENST00000354185 POLR3GLQ9BT43 218 aa11.85□□□□□ -0.51
DDX21-201ENST00000354185 ZNF608Q9ULD9 1512 aaPredicted RBP11.84□□□□□ -0.51
DDX21-201ENST00000354185 CNGB1Q14028 1251 aaPredicted RBP11.84□□□□□ -0.51
DDX21-201ENST00000354185 ZNF326Q5BKZ1 582 aaKnown RBP11.83□□□□□ -0.52
DDX21-201ENST00000354185 GRIN2BQ13224 1484 aa11.83□□□□□ -0.52
DDX21-201ENST00000354185 CFDP1Q9UEE9 299 aaPredicted RBP11.82□□□□□ -0.52
DDX21-201ENST00000354185 ABCA10Q8WWZ4 1543 aa11.81□□□□□ -0.52
DDX21-201ENST00000354185 IFT140Q96RY7 1462 aa11.81□□□□□ -0.52
DDX21-201ENST00000354185 KIF21BO75037 1637 aa11.81□□□□□ -0.52
DDX21-201ENST00000354185 YTHDC1Q96MU7 727 aaKnown RBP11.8□□□□□ -0.52
DDX21-201ENST00000354185 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.8□□□□□ -0.525e-7■■□□□ 13.9
DDX21-201ENST00000354185 CARMIL2Q6F5E8 1435 aa11.8□□□□□ -0.52
DDX21-201ENST00000354185 ARAP1Q96P48 1450 aa11.8□□□□□ -0.52
DDX21-201ENST00000354185 BIVM-ERCC5R4GMW8 1640 aa11.8□□□□□ -0.52
DDX21-201ENST00000354185 SNAPC4Q5SXM2 1469 aa11.8□□□□□ -0.52
DDX21-201ENST00000354185 FMN1Q68DA7 1419 aa11.79□□□□□ -0.52
DDX21-201ENST00000354185 KIF21AQ7Z4S6 1674 aa11.78□□□□□ -0.52
DDX21-201ENST00000354185 TSPY4P0CV99 314 aa11.78□□□□□ -0.52
DDX21-201ENST00000354185 TSPY10P0CW01 314 aa11.78□□□□□ -0.52
DDX21-201ENST00000354185 CCNB3Q8WWL7 1395 aa11.77□□□□□ -0.52
DDX21-201ENST00000354185 ARHGAP35Q9NRY4 1499 aa11.77□□□□□ -0.53
DDX21-201ENST00000354185 ERICH3Q5RHP9 1530 aa11.76□□□□□ -0.53
DDX21-201ENST00000354185 OSCARQ8IYS5 282 aa11.73□□□□□ -0.53
DDX21-201ENST00000354185 PLPPR3Q6T4P5 718 aa11.72□□□□□ -0.53
DDX21-201ENST00000354185 PTPRGP23470 1445 aa11.71□□□□□ -0.53
DDX21-201ENST00000354185 CYB5RLQ6IPT4 315 aa11.71□□□□□ -0.54
DDX21-201ENST00000354185 DIEXFQ68CQ4 756 aaKnown RBP11.69□□□□□ -0.54
DDX21-201ENST00000354185 SIN3AQ96ST3 1273 aa11.68□□□□□ -0.54
DDX21-201ENST00000354185 HIRIP3Q9BW71 556 aaPredicted RBP11.67□□□□□ -0.54
DDX21-201ENST00000354185 SLC4A1APQ9BWU0 796 aaKnown RBP11.67□□□□□ -0.54
DDX21-201ENST00000354185 SENP3Q9H4L4 574 aaPredicted RBP11.67□□□□□ -0.54
DDX21-201ENST00000354185 PRG4Q92954 1404 aaPredicted RBP11.66□□□□□ -0.54
DDX21-201ENST00000354185 PRDM2Q13029 1718 aa11.65□□□□□ -0.54
DDX21-201ENST00000354185 HNRNPMP52272 730 aaKnown RBP eCLIP11.64□□□□□ -0.55
DDX21-201ENST00000354185 ZNF644Q9H582 1327 aaPredicted RBP11.64□□□□□ -0.55
DDX21-201ENST00000354185 CHGAP10645 457 aaKnown RBP11.64□□□□□ -0.55
DDX21-201ENST00000354185 FOXD1Q16676 465 aa11.63□□□□□ -0.55
DDX21-201ENST00000354185 TONSLQ96HA7 1378 aa11.63□□□□□ -0.55
DDX21-201ENST00000354185 PHLDB1Q86UU1 1377 aa11.63□□□□□ -0.55
DDX21-201ENST00000354185 ZNF316A6NFI3 1004 aaPredicted RBP11.62□□□□□ -0.55
DDX21-201ENST00000354185 KDM2AQ9Y2K7 1162 aa11.62□□□□□ -0.55
DDX21-201ENST00000354185 GRIN2AQ12879 1464 aa11.62□□□□□ -0.55
DDX21-201ENST00000354185 SYNJ2O15056 1496 aa11.6□□□□□ -0.55
DDX21-201ENST00000354185 CUL7Q14999 1698 aa11.59□□□□□ -0.55
DDX21-201ENST00000354185 RAB3GAP2Q9H2M9 1393 aa11.59□□□□□ -0.55
DDX21-201ENST00000354185 CASKIN1Q8WXD9 1431 aa11.59□□□□□ -0.55
DDX21-201ENST00000354185 KIAA0586Q9BVV6 1533 aa11.59□□□□□ -0.55
DDX21-201ENST00000354185 TRHP20396 242 aaPredicted RBP11.59□□□□□ -0.55
DDX21-201ENST00000354185 LRRC9Q6ZRR7 1453 aa11.58□□□□□ -0.56
DDX21-201ENST00000354185 RGL3Q3MIN7 710 aa11.58□□□□□ -0.56
DDX21-201ENST00000354185 CCDC18Q5T9S5 1454 aa11.57□□□□□ -0.56
DDX21-201ENST00000354185 IQGAP2Q13576 1575 aa11.57□□□□□ -0.56
DDX21-201ENST00000354185 MAGI1Q96QZ7 1491 aaPredicted RBP11.56□□□□□ -0.56
DDX21-201ENST00000354185 SETD5Q9C0A6 1442 aa11.56□□□□□ -0.56
DDX21-201ENST00000354185 WDR62O43379 1518 aa11.56□□□□□ -0.56
DDX21-201ENST00000354185 CDK13Q14004 1512 aaKnown RBP11.55□□□□□ -0.56
DDX21-201ENST00000354185 PLB1Q6P1J6 1458 aa11.55□□□□□ -0.56
DDX21-201ENST00000354185 EFCAB2Q5VUJ9 269 aa11.54□□□□□ -0.56
DDX21-201ENST00000354185 ESF1Q9H501 851 aaKnown RBP11.54□□□□□ -0.56
DDX21-201ENST00000354185 EIF4G3O43432 1585 aaKnown RBP11.54□□□□□ -0.56
DDX21-201ENST00000354185 EFCAB5A4FU69 1503 aa11.54□□□□□ -0.56
DDX21-201ENST00000354185 FYCO1Q9BQS8 1478 aa11.53□□□□□ -0.56
DDX21-201ENST00000354185 PCF11O94913 1555 aaKnown RBP11.53□□□□□ -0.56
DDX21-201ENST00000354185 NCOA2Q15596 1464 aa11.52□□□□□ -0.57
DDX21-201ENST00000354185 CENPBP07199 599 aaPredicted RBP11.52□□□□□ -0.57
DDX21-201ENST00000354185 BCANQ96GW7 911 aa11.52□□□□□ -0.57
DDX21-201ENST00000354185 MLECQ14165 292 aa11.51□□□□□ -0.57
DDX21-201ENST00000354185 DDX10Q13206 875 aaKnown RBP11.51□□□□□ -0.57
DDX21-201ENST00000354185 FGD6Q6ZV73 1430 aa11.5□□□□□ -0.57
DDX21-201ENST00000354185 GGT6Q6P531 493 aa11.5□□□□□ -0.57
DDX21-201ENST00000354185 STAG3Q9UJ98 1225 aa11.5□□□□□ -0.57
DDX21-201ENST00000354185 ARID4BQ4LE39 1312 aaPredicted RBP11.5□□□□□ -0.57
DDX21-201ENST00000354185 TARBP1Q13395 1621 aaKnown RBP11.49□□□□□ -0.57
DDX21-201ENST00000354185 TIAM1Q13009 1591 aa11.49□□□□□ -0.57
DDX21-201ENST00000354185 MYOM3Q5VTT5 1437 aa11.49□□□□□ -0.57
DDX21-201ENST00000354185 PKD2Q13563 968 aa11.48□□□□□ -0.57
DDX21-201ENST00000354185 ADAMTS12P58397 1594 aa11.48□□□□□ -0.57
DDX21-201ENST00000354185 ABCA5Q8WWZ7 1642 aa11.48□□□□□ -0.57
DDX21-201ENST00000354185 MPHOSPH9Q99550 1183 aa11.47□□□□□ -0.57
DDX21-201ENST00000354185 EPRSP07814 1512 aaKnown RBP11.47□□□□□ -0.57
DDX21-201ENST00000354185 NUP155O75694 1391 aa11.45□□□□□ -0.58
DDX21-201ENST00000354185 SPAG9O60271 1321 aaKnown RBP11.44□□□□□ -0.58
DDX21-201ENST00000354185 KIF3BO15066 747 aa11.44□□□□□ -0.58
DDX21-201ENST00000354185 AFAP1Q8N556 730 aa11.44□□□□□ -0.58
DDX21-201ENST00000354185 PBRM1Q86U86 1689 aa11.44□□□□□ -0.58
DDX21-201ENST00000354185 ANKRD30AQ9BXX3 1397 aa11.44□□□□□ -0.58
DDX21-201ENST00000354185 FAM69CQ0P6D2 419 aa11.44□□□□□ -0.58
DDX21-201ENST00000354185 DHX57Q6P158 1386 aaKnown RBP11.43□□□□□ -0.58
DDX21-201ENST00000354185 UACAQ9BZF9 1416 aa11.42□□□□□ -0.58
DDX21-201ENST00000354185 HECW1Q76N89 1606 aa11.41□□□□□ -0.58
DDX21-201ENST00000354185 RRBP1Q9P2E9 1410 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms