RNA–Protein interactions for RNA: ENST00000353319.8

PTPN2-203, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-203ENST00000353319 APLP2Q06481 763 aa16.26■□□□□ 0.19
PTPN2-203ENST00000353319 THOC2Q8NI27 1593 aaKnown RBP16.26■□□□□ 0.19
PTPN2-203ENST00000353319 GRIN2BQ13224 1484 aa16.23■□□□□ 0.19
PTPN2-203ENST00000353319 PBRM1Q86U86 1689 aa16.23■□□□□ 0.19
PTPN2-203ENST00000353319 CTTNBP2Q8WZ74 1663 aa16.23■□□□□ 0.19
PTPN2-203ENST00000353319 FHAD1B1AJZ9 1412 aa16.23■□□□□ 0.19
PTPN2-203ENST00000353319 AQRO60306 1485 aaKnown RBP eCLIP16.22■□□□□ 0.194e-6■■■■■ 31
PTPN2-203ENST00000353319 EFCAB5A4FU69 1503 aa16.2■□□□□ 0.18
PTPN2-203ENST00000353319 ZNF608Q9ULD9 1512 aaPredicted RBP16.18■□□□□ 0.18
PTPN2-203ENST00000353319 ADAMTS12P58397 1594 aa16.17■□□□□ 0.18
PTPN2-203ENST00000353319 MAP3K1Q13233 1512 aa16.17■□□□□ 0.18
PTPN2-203ENST00000353319 TTBK1Q5TCY1 1321 aaPredicted RBP16.11■□□□□ 0.17
PTPN2-203ENST00000353319 EIF4G3O43432 1585 aaKnown RBP16.11■□□□□ 0.17
PTPN2-203ENST00000353319 ZEB1P37275 1124 aaPredicted RBP16.1■□□□□ 0.17
PTPN2-203ENST00000353319 SAMD9Q5K651 1589 aa16.1■□□□□ 0.17
PTPN2-203ENST00000353319 KANK4Q5T7N3 995 aaPredicted RBP16.09■□□□□ 0.17
PTPN2-203ENST00000353319 MAGI1Q96QZ7 1491 aaPredicted RBP16.07■□□□□ 0.16
PTPN2-203ENST00000353319 FHOD3Q2V2M9 1422 aa16.07■□□□□ 0.16
PTPN2-203ENST00000353319 FMN1Q68DA7 1419 aa16.07■□□□□ 0.16
PTPN2-203ENST00000353319 CASKIN1Q8WXD9 1431 aa16.06■□□□□ 0.16
PTPN2-203ENST00000353319 SNAPC4Q5SXM2 1469 aa16.06■□□□□ 0.16
PTPN2-203ENST00000353319 TIAM1Q13009 1591 aa16.05■□□□□ 0.16
PTPN2-203ENST00000353319 P3H3Q8IVL6 736 aa16.05■□□□□ 0.16
PTPN2-203ENST00000353319 FYCO1Q9BQS8 1478 aa16.05■□□□□ 0.16
PTPN2-203ENST00000353319 IQGAP2Q13576 1575 aa16.04■□□□□ 0.16
PTPN2-203ENST00000353319 GRIN2AQ12879 1464 aa16.02■□□□□ 0.16
PTPN2-203ENST00000353319 KIAA0586Q9BVV6 1533 aa16.02■□□□□ 0.16
PTPN2-203ENST00000353319 PCF11O94913 1555 aaKnown RBP16.02■□□□□ 0.16
PTPN2-203ENST00000353319 SYNJ2O15056 1496 aa16.01■□□□□ 0.15
PTPN2-203ENST00000353319 UGGT2Q9NYU1 1516 aa16.01■□□□□ 0.15
PTPN2-203ENST00000353319 LRRC9Q6ZRR7 1453 aa16■□□□□ 0.15
PTPN2-203ENST00000353319 RRBP1Q9P2E9 1410 aaKnown RBP15.99■□□□□ 0.15
PTPN2-203ENST00000353319 CFAP43Q8NDM7 1665 aa15.99■□□□□ 0.15
PTPN2-203ENST00000353319 PIAS4Q8N2W9 510 aaPredicted RBP15.98■□□□□ 0.15
PTPN2-203ENST00000353319 CHMP7Q8WUX9 453 aaPredicted RBP15.95■□□□□ 0.14
PTPN2-203ENST00000353319 NUP160Q12769 1436 aa15.93■□□□□ 0.14
PTPN2-203ENST00000353319 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.9■□□□□ 0.14
PTPN2-203ENST00000353319 CCNB3Q8WWL7 1395 aa15.9■□□□□ 0.14
PTPN2-203ENST00000353319 CEP170Q5SW79 1584 aa15.9■□□□□ 0.14
PTPN2-203ENST00000353319 DISP1Q96F81 1524 aa15.9■□□□□ 0.14
PTPN2-203ENST00000353319 ATP1B4Q9UN42 357 aaPredicted RBP15.89■□□□□ 0.13
PTPN2-203ENST00000353319 HNRNPUL2Q1KMD3 747 aaKnown RBP15.89■□□□□ 0.13
PTPN2-203ENST00000353319 CCER1Q8TC90 406 aaPredicted RBP15.89■□□□□ 0.13
PTPN2-203ENST00000353319 KIAA0556O60303 1618 aa15.87■□□□□ 0.13
PTPN2-203ENST00000353319 CCDC18Q5T9S5 1454 aa15.86■□□□□ 0.13
PTPN2-203ENST00000353319 LRRIQ1Q96JM4 1722 aa15.85■□□□□ 0.13
PTPN2-203ENST00000353319 PHLDB1Q86UU1 1377 aa15.85■□□□□ 0.13
PTPN2-203ENST00000353319 HECW1Q76N89 1606 aa15.84■□□□□ 0.13
PTPN2-203ENST00000353319 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.83■□□□□ 0.12
PTPN2-203ENST00000353319 FBLN2P98095 1184 aa15.83■□□□□ 0.12
PTPN2-203ENST00000353319 JPH4Q96JJ6 628 aa15.82■□□□□ 0.12
PTPN2-203ENST00000353319 MTUS2Q5JR59 1369 aa15.82■□□□□ 0.12
PTPN2-203ENST00000353319 CARMIL2Q6F5E8 1435 aa15.8■□□□□ 0.12
PTPN2-203ENST00000353319 EPRSP07814 1512 aaKnown RBP15.8■□□□□ 0.12
PTPN2-203ENST00000353319 EHBP1L1Q8N3D4 1523 aa15.79■□□□□ 0.12
PTPN2-203ENST00000353319 ARHGEF11O15085 1522 aa15.76■□□□□ 0.11
PTPN2-203ENST00000353319 SUPT6HQ7KZ85 1726 aaKnown RBP15.75■□□□□ 0.11
PTPN2-203ENST00000353319 RAPGEF6Q8TEU7 1601 aa15.74■□□□□ 0.11
PTPN2-203ENST00000353319 NCOA2Q15596 1464 aa15.74■□□□□ 0.11
PTPN2-203ENST00000353319 MAGI3Q5TCQ9 1506 aa15.73■□□□□ 0.11
PTPN2-203ENST00000353319 FGD6Q6ZV73 1430 aa15.73■□□□□ 0.11
PTPN2-203ENST00000353319 NUP153P49790 1475 aaKnown RBP15.72■□□□□ 0.11
PTPN2-203ENST00000353319 MYOM3Q5VTT5 1437 aa15.72■□□□□ 0.11
PTPN2-203ENST00000353319 CHD1O14646 1710 aa15.71■□□□□ 0.11
PTPN2-203ENST00000353319 CLSPNQ9HAW4 1339 aa15.71■□□□□ 0.11
PTPN2-203ENST00000353319 PLPPR3Q6T4P5 718 aa15.7■□□□□ 0.1
PTPN2-203ENST00000353319 CDK13Q14004 1512 aaKnown RBP15.69■□□□□ 0.1
PTPN2-203ENST00000353319 FAM50AQ14320 339 aaKnown RBP15.68■□□□□ 0.1
PTPN2-203ENST00000353319 CDK11AQ9UQ88 783 aaPredicted RBP15.68■□□□□ 0.1
PTPN2-203ENST00000353319 SHROOM2Q13796 1616 aa15.67■□□□□ 0.1
PTPN2-203ENST00000353319 PRG4Q92954 1404 aaPredicted RBP15.66■□□□□ 0.1
PTPN2-203ENST00000353319 MIA2Q96PC5 1412 aa15.66■□□□□ 0.1
PTPN2-203ENST00000353319 SETD5Q9C0A6 1442 aa15.66■□□□□ 0.1
PTPN2-203ENST00000353319 ABCA8O94911 1581 aa15.65■□□□□ 0.1
PTPN2-203ENST00000353319 PLB1Q6P1J6 1458 aa15.65■□□□□ 0.1
PTPN2-203ENST00000353319 DHX57Q6P158 1386 aaKnown RBP15.65■□□□□ 0.1
PTPN2-203ENST00000353319 TCOF1Q13428 1488 aaKnown RBP15.65■□□□□ 0.1
PTPN2-203ENST00000353319 ITGAEP38570 1179 aa15.64■□□□□ 0.09
PTPN2-203ENST00000353319 RAB3GAP2Q9H2M9 1393 aa15.62■□□□□ 0.09
PTPN2-203ENST00000353319 PPP6R1Q9UPN7 881 aa15.62■□□□□ 0.09
PTPN2-203ENST00000353319 PTPN23Q9H3S7 1636 aa15.61■□□□□ 0.09
PTPN2-203ENST00000353319 PTPRGP23470 1445 aa15.61■□□□□ 0.09
PTPN2-203ENST00000353319 TROQ12816 1431 aaPredicted RBP15.6■□□□□ 0.09
PTPN2-203ENST00000353319 CLASP1Q7Z460 1538 aa15.59■□□□□ 0.09
PTPN2-203ENST00000353319 ARID3CA6NKF2 412 aa15.57■□□□□ 0.08
PTPN2-203ENST00000353319 ATP10BO94823 1461 aa15.57■□□□□ 0.08
PTPN2-203ENST00000353319 ADCY10Q96PN6 1610 aa15.56■□□□□ 0.08
PTPN2-203ENST00000353319 PTPRKQ15262 1439 aa15.56■□□□□ 0.08
PTPN2-203ENST00000353319 HFM1A2PYH4 1435 aa15.55■□□□□ 0.08
PTPN2-203ENST00000353319 ADRA2BP18089 450 aa15.55■□□□□ 0.08
PTPN2-203ENST00000353319 PLEKHD1A6NEE1 506 aa15.53■□□□□ 0.08
PTPN2-203ENST00000353319 UACAQ9BZF9 1416 aa15.53■□□□□ 0.08
PTPN2-203ENST00000353319 AKNAQ7Z591 1439 aa15.51■□□□□ 0.07
PTPN2-203ENST00000353319 NAIPQ13075 1403 aa15.49■□□□□ 0.07
PTPN2-203ENST00000353319 GPATCH8Q9UKJ3 1502 aaKnown RBP15.49■□□□□ 0.07
PTPN2-203ENST00000353319 ERCC6L2Q5T890 1561 aa15.48■□□□□ 0.07
PTPN2-203ENST00000353319 ITSN2Q9NZM3 1697 aa15.48■□□□□ 0.07
PTPN2-203ENST00000353319 ABCC10Q5T3U5 1492 aa15.47■□□□□ 0.07
PTPN2-203ENST00000353319 ACIN1Q9UKV3 1341 aaKnown RBP15.46■□□□□ 0.07
PTPN2-203ENST00000353319 MAPKBP1O60336 1514 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms