RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ZBTB47Q9UFB7 747 aaPredicted RBP18.26■□□□□ 0.51
IFT88-202ENST00000351808 ANP32AP39687 249 aaKnown RBP18.23■□□□□ 0.51
IFT88-202ENST00000351808 WDR97A6NE52 1622 aa18.22■□□□□ 0.51
IFT88-202ENST00000351808 PKNOX2Q96KN3 472 aa18.22■□□□□ 0.51
IFT88-202ENST00000351808 WASHC2AQ641Q2 1341 aa18.21■□□□□ 0.51
IFT88-202ENST00000351808 SIN3AQ96ST3 1273 aa18.18■□□□□ 0.5
IFT88-202ENST00000351808 KANK4Q5T7N3 995 aaPredicted RBP18.17■□□□□ 0.5
IFT88-202ENST00000351808 CEP164Q9UPV0 1460 aa18.17■□□□□ 0.5
IFT88-202ENST00000351808 BAZ1AQ9NRL2 1556 aaPredicted RBP18.16■□□□□ 0.5
IFT88-202ENST00000351808 C11orf95C9JLR9 678 aaPredicted RBP18.15■□□□□ 0.5
IFT88-202ENST00000351808 BRPF3Q9ULD4 1205 aa18.15■□□□□ 0.5
IFT88-202ENST00000351808 MAPKBP1O60336 1514 aa18.15■□□□□ 0.5
IFT88-202ENST00000351808 NEFMP07197 916 aa18.13■□□□□ 0.49
IFT88-202ENST00000351808 CUX2O14529 1486 aa18.12■□□□□ 0.49
IFT88-202ENST00000351808 KIF21BO75037 1637 aa18.11■□□□□ 0.49
IFT88-202ENST00000351808 WASHC2CQ9Y4E1 1318 aa18.11■□□□□ 0.49
IFT88-202ENST00000351808 LAS1LQ9Y4W2 734 aaKnown RBP18.1■□□□□ 0.49
IFT88-202ENST00000351808 RAB3GAP2Q9H2M9 1393 aa18.1■□□□□ 0.49
IFT88-202ENST00000351808 RRBP1Q9P2E9 1410 aaKnown RBP18.08■□□□□ 0.49
IFT88-202ENST00000351808 TIMELESSQ9UNS1 1208 aa18.07■□□□□ 0.48
IFT88-202ENST00000351808 USP35Q9P2H5 1018 aa18.04■□□□□ 0.48
IFT88-202ENST00000351808 CCNB3Q8WWL7 1395 aa18.03■□□□□ 0.48
IFT88-202ENST00000351808 NPM2Q86SE8 214 aaKnown RBP18.02■□□□□ 0.48
IFT88-202ENST00000351808 RAPGEF2Q9Y4G8 1499 aa18.01■□□□□ 0.47
IFT88-202ENST00000351808 BAZ1BQ9UIG0 1483 aaKnown RBP17.99■□□□□ 0.47
IFT88-202ENST00000351808 CCDC184Q52MB2 194 aa17.96■□□□□ 0.47
IFT88-202ENST00000351808 RSPH6AQ9H0K4 717 aa17.95■□□□□ 0.46
IFT88-202ENST00000351808 GSE1Q14687 1217 aa17.94■□□□□ 0.46
IFT88-202ENST00000351808 FAM9BQ8IZU0 186 aa17.93■□□□□ 0.46
IFT88-202ENST00000351808 SMARCA2P51531 1590 aa17.93■□□□□ 0.46
IFT88-202ENST00000351808 TOP2AP11388 1531 aaKnown RBP17.91■□□□□ 0.46
IFT88-202ENST00000351808 PPM1GO15355 546 aaPredicted RBP17.91■□□□□ 0.46
IFT88-202ENST00000351808 SETD5Q9C0A6 1442 aa17.91■□□□□ 0.46
IFT88-202ENST00000351808 ZMYND15Q9H091 742 aa17.88■□□□□ 0.45
IFT88-202ENST00000351808 ARAP1Q96P48 1450 aa17.87■□□□□ 0.45
IFT88-202ENST00000351808 ZBED9Q6R2W3 1325 aa17.87■□□□□ 0.45
IFT88-202ENST00000351808 VSIG10Q8N0Z9 540 aa17.86■□□□□ 0.45
IFT88-202ENST00000351808 SLC24A1O60721 1099 aa17.86■□□□□ 0.45
IFT88-202ENST00000351808 PLEKHG5O94827 1062 aa17.86■□□□□ 0.45
IFT88-202ENST00000351808 FRAT1Q92837 279 aaPredicted RBP17.86■□□□□ 0.45
IFT88-202ENST00000351808 GLIPR1L2Q4G1C9 344 aa17.85■□□□□ 0.45
IFT88-202ENST00000351808 AKNAQ7Z591 1439 aa17.84■□□□□ 0.45
IFT88-202ENST00000351808 FAM43AQ8N2R8 423 aa17.8■□□□□ 0.44
IFT88-202ENST00000351808 MRS2Q9HD23 443 aa17.8■□□□□ 0.44
IFT88-202ENST00000351808 NCAPD3P42695 1498 aa17.79■□□□□ 0.44
IFT88-202ENST00000351808 NFKBIBQ15653 356 aa17.79■□□□□ 0.44
IFT88-202ENST00000351808 PODXL2Q9NZ53 605 aa17.79■□□□□ 0.44
IFT88-202ENST00000351808 TONSLQ96HA7 1378 aa17.79■□□□□ 0.44
IFT88-202ENST00000351808 PDE4AP27815 886 aa17.77■□□□□ 0.44
IFT88-202ENST00000351808 SYNJ1O43426 1573 aa17.77■□□□□ 0.43
IFT88-202ENST00000351808 FAM50AQ14320 339 aaKnown RBP17.74■□□□□ 0.43
IFT88-202ENST00000351808 DCAF11Q8TEB1 546 aa17.73■□□□□ 0.43
IFT88-202ENST00000351808 PRKRIP1Q9H875 184 aaPredicted RBP17.73■□□□□ 0.43
IFT88-202ENST00000351808 BACH2Q9BYV9 841 aa17.72■□□□□ 0.43
IFT88-202ENST00000351808 RNF123Q5XPI4 1314 aa17.72■□□□□ 0.43
IFT88-202ENST00000351808 PEG3Q9GZU2 1588 aa17.71■□□□□ 0.43
IFT88-202ENST00000351808 TCERG1O14776 1098 aaKnown RBP17.71■□□□□ 0.43
IFT88-202ENST00000351808 SMG6Q86US8 1419 aaKnown RBP17.7■□□□□ 0.42
IFT88-202ENST00000351808 NUDCQ9Y266 331 aa17.7■□□□□ 0.42
IFT88-202ENST00000351808 HSPA5P11021 654 aaKnown RBP17.69■□□□□ 0.42
IFT88-202ENST00000351808 SLC4A3P48751 1232 aa17.68■□□□□ 0.42
IFT88-202ENST00000351808 SENP3-EIF4A1A0A087X0R7 540 aa17.67■□□□□ 0.42
IFT88-202ENST00000351808 PABPN1Q86U42 306 aaKnown RBP eCLIP17.67■□□□□ 0.42
IFT88-202ENST00000351808 FHAD1B1AJZ9 1412 aa17.65■□□□□ 0.42
IFT88-202ENST00000351808 CNTLNQ9NXG0 1405 aa17.64■□□□□ 0.41
IFT88-202ENST00000351808 DDRGK1Q96HY6 314 aa17.64■□□□□ 0.41
IFT88-202ENST00000351808 RRAGDQ9NQL2 400 aaPredicted RBP17.63■□□□□ 0.41
IFT88-202ENST00000351808 DAXXQ9UER7 740 aaPredicted RBP17.63■□□□□ 0.41
IFT88-202ENST00000351808 HSP90AA2PQ14568 343 aaPredicted RBP17.61■□□□□ 0.41
IFT88-202ENST00000351808 PHLDB1Q86UU1 1377 aa17.6■□□□□ 0.41
IFT88-202ENST00000351808 FRAT2O75474 233 aaPredicted RBP17.6■□□□□ 0.41
IFT88-202ENST00000351808 MS4A1P11836 297 aa17.59■□□□□ 0.41
IFT88-202ENST00000351808 EXOC6Q8TAG9 804 aa17.59■□□□□ 0.41
IFT88-202ENST00000351808 SMARCA4P51532 1647 aa17.57■□□□□ 0.4
IFT88-202ENST00000351808 NCOA2Q15596 1464 aa17.56■□□□□ 0.4
IFT88-202ENST00000351808 EIF4G2P78344 907 aaKnown RBP eCLIP17.56■□□□□ 0.4
IFT88-202ENST00000351808 CNGB1Q14028 1251 aaPredicted RBP17.56■□□□□ 0.4
IFT88-202ENST00000351808 NAP1L5Q96NT1 182 aaPredicted RBP17.56■□□□□ 0.4
IFT88-202ENST00000351808 PRXQ9BXM0 1461 aa17.55■□□□□ 0.4
IFT88-202ENST00000351808 SKAP1Q86WV1 359 aa17.54■□□□□ 0.4
IFT88-202ENST00000351808 ERICH3Q5RHP9 1530 aa17.54■□□□□ 0.4
IFT88-202ENST00000351808 ARHGAP35Q9NRY4 1499 aa17.53■□□□□ 0.4
IFT88-202ENST00000351808 RRP9O43818 475 aaKnown RBP17.53■□□□□ 0.4
IFT88-202ENST00000351808 HSP90AA1P07900 732 aaKnown RBP17.52■□□□□ 0.39
IFT88-202ENST00000351808 CCDC7Q96M83 1385 aa17.5■□□□□ 0.39
IFT88-202ENST00000351808 KDM5BQ9UGL1 1544 aa17.49■□□□□ 0.39
IFT88-202ENST00000351808 RRP1P56182 461 aaKnown RBP17.49■□□□□ 0.39
IFT88-202ENST00000351808 TIAM1Q13009 1591 aa17.48■□□□□ 0.39
IFT88-202ENST00000351808 LRRC9Q6ZRR7 1453 aa17.47■□□□□ 0.39
IFT88-202ENST00000351808 PNNQ9H307 717 aaKnown RBP17.46■□□□□ 0.39
IFT88-202ENST00000351808 POGKQ9P215 609 aa17.45■□□□□ 0.38
IFT88-202ENST00000351808 NCOA1Q15788 1441 aa17.43■□□□□ 0.38
IFT88-202ENST00000351808 UNC13AQ9UPW8 1703 aa17.42■□□□□ 0.38
IFT88-202ENST00000351808 A0A0U1RQG5 324 aaPredicted RBP17.42■□□□□ 0.38
IFT88-202ENST00000351808 CCDC18Q5T9S5 1454 aa17.41■□□□□ 0.38
IFT88-202ENST00000351808 UACAQ9BZF9 1416 aa17.4■□□□□ 0.38
IFT88-202ENST00000351808 ARXQ96QS3 562 aa17.38■□□□□ 0.37
IFT88-202ENST00000351808 RCAN3Q9UKA8 241 aa17.38■□□□□ 0.37
IFT88-202ENST00000351808 MAP3K1Q13233 1512 aa17.38■□□□□ 0.37
IFT88-202ENST00000351808 KIF7Q2M1P5 1343 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms