RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 ABCC10Q5T3U5 1492 aa17.36■□□□□ 0.37
MRPL55-204ENST00000348259 DIP2BQ9P265 1576 aa17.35■□□□□ 0.37
MRPL55-204ENST00000348259 ADCY10Q96PN6 1610 aa17.34■□□□□ 0.37
MRPL55-204ENST00000348259 JPH4Q96JJ6 628 aa17.33■□□□□ 0.36
MRPL55-204ENST00000348259 SUPT5HO00267 1087 aaKnown RBP17.27■□□□□ 0.36
MRPL55-204ENST00000348259 KIAA0586Q9BVV6 1533 aa17.24■□□□□ 0.35
MRPL55-204ENST00000348259 CUL7Q14999 1698 aa17.21■□□□□ 0.35
MRPL55-204ENST00000348259 FAM69CQ0P6D2 419 aa17.21■□□□□ 0.35
MRPL55-204ENST00000348259 KDM6BO15054 1643 aa17.2■□□□□ 0.34
MRPL55-204ENST00000348259 IGF1RP08069 1367 aa17.18■□□□□ 0.34
MRPL55-204ENST00000348259 PPRC1Q5VV67 1664 aaKnown RBP17.16■□□□□ 0.34
MRPL55-204ENST00000348259 TSPOAP1O95153 1857 aa17.16■□□□□ 0.34
MRPL55-204ENST00000348259 KDM4FA0A1W2PPD8 638 aa17.15■□□□□ 0.34
MRPL55-204ENST00000348259 NPM1P06748 294 aaKnown RBP eCLIP17.11■□□□□ 0.33
MRPL55-204ENST00000348259 KIF27Q86VH2 1401 aa17.11■□□□□ 0.33
MRPL55-204ENST00000348259 GLI2P10070 1586 aa17.11■□□□□ 0.33
MRPL55-204ENST00000348259 ABCC2Q92887 1545 aa17.08■□□□□ 0.32
MRPL55-204ENST00000348259 UHRF1BP1LA0JNW5 1464 aa17.05■□□□□ 0.32
MRPL55-204ENST00000348259 PTPRGP23470 1445 aa17.05■□□□□ 0.32
MRPL55-204ENST00000348259 IQGAP2Q13576 1575 aa17.03■□□□□ 0.32
MRPL55-204ENST00000348259 TNIKQ9UKE5 1360 aa17.02■□□□□ 0.32
MRPL55-204ENST00000348259 DISP1Q96F81 1524 aa17.02■□□□□ 0.32
MRPL55-204ENST00000348259 PLB1Q6P1J6 1458 aa17.02■□□□□ 0.32
MRPL55-204ENST00000348259 ASXL2Q76L83 1435 aa17.02■□□□□ 0.31
MRPL55-204ENST00000348259 CARMIL1Q5VZK9 1371 aa17.02■□□□□ 0.31
MRPL55-204ENST00000348259 MAP3K4Q9Y6R4 1608 aa17■□□□□ 0.31
MRPL55-204ENST00000348259 COL17A1Q9UMD9 1497 aaPredicted RBP16.99■□□□□ 0.31
MRPL55-204ENST00000348259 CARMIL2Q6F5E8 1435 aa16.98■□□□□ 0.31
MRPL55-204ENST00000348259 KDM5BQ9UGL1 1544 aa16.98■□□□□ 0.31
MRPL55-204ENST00000348259 UACAQ9BZF9 1416 aa16.96■□□□□ 0.31
MRPL55-204ENST00000348259 UGGT2Q9NYU1 1516 aa16.96■□□□□ 0.31
MRPL55-204ENST00000348259 EPRSP07814 1512 aaKnown RBP16.96■□□□□ 0.3
MRPL55-204ENST00000348259 ADGRL1O94910 1474 aa16.94■□□□□ 0.3
MRPL55-204ENST00000348259 ZCCHC11Q5TAX3 1644 aaKnown RBP16.94■□□□□ 0.3
MRPL55-204ENST00000348259 KIAA0556O60303 1618 aa16.92■□□□□ 0.3
MRPL55-204ENST00000348259 TEX14Q8IWB6 1497 aa16.86■□□□□ 0.29
MRPL55-204ENST00000348259 ILDR1Q86SU0 546 aaPredicted RBP16.85■□□□□ 0.29
MRPL55-204ENST00000348259 RAPGEF2Q9Y4G8 1499 aa16.85■□□□□ 0.29
MRPL55-204ENST00000348259 HECW2Q9P2P5 1572 aa16.83■□□□□ 0.28
MRPL55-204ENST00000348259 WDR7Q9Y4E6 1490 aa16.82■□□□□ 0.28
MRPL55-204ENST00000348259 TTBK1Q5TCY1 1321 aaPredicted RBP16.82■□□□□ 0.28
MRPL55-204ENST00000348259 CTTNBP2Q8WZ74 1663 aa16.81■□□□□ 0.28
MRPL55-204ENST00000348259 CFAP43Q8NDM7 1665 aa16.81■□□□□ 0.28
MRPL55-204ENST00000348259 ABCA8O94911 1581 aa16.81■□□□□ 0.28
MRPL55-204ENST00000348259 MAGI3Q5TCQ9 1506 aa16.8■□□□□ 0.28
MRPL55-204ENST00000348259 CD109Q6YHK3 1445 aa16.7■□□□□ 0.26
MRPL55-204ENST00000348259 GOLGA3Q08378 1498 aa16.69■□□□□ 0.26
MRPL55-204ENST00000348259 KIF21BO75037 1637 aa16.69■□□□□ 0.26
MRPL55-204ENST00000348259 PRXQ9BXM0 1461 aa16.68■□□□□ 0.26
MRPL55-204ENST00000348259 ARAP3Q8WWN8 1544 aa16.68■□□□□ 0.26
MRPL55-204ENST00000348259 ABCA9Q8IUA7 1624 aa16.63■□□□□ 0.25
MRPL55-204ENST00000348259 ADAMTSL3P82987 1691 aa16.63■□□□□ 0.25
MRPL55-204ENST00000348259 ATP10BO94823 1461 aa16.61■□□□□ 0.25
MRPL55-204ENST00000348259 SAMD9Q5K651 1589 aa16.59■□□□□ 0.25
MRPL55-204ENST00000348259 FRMPD1Q5SYB0 1578 aa16.58■□□□□ 0.24
MRPL55-204ENST00000348259 KCNH8Q96L42 1107 aa16.56■□□□□ 0.24
MRPL55-204ENST00000348259 PHLDB1Q86UU1 1377 aa16.54■□□□□ 0.24
MRPL55-204ENST00000348259 BCORL1Q5H9F3 1711 aa16.54■□□□□ 0.24
MRPL55-204ENST00000348259 PTPRMP28827 1452 aa16.54■□□□□ 0.24
MRPL55-204ENST00000348259 NEO1Q92859 1461 aa16.53■□□□□ 0.24
MRPL55-204ENST00000348259 RAPGEF6Q8TEU7 1601 aa16.52■□□□□ 0.23
MRPL55-204ENST00000348259 MADDQ8WXG6 1647 aa16.49■□□□□ 0.23
MRPL55-204ENST00000348259 RICTORQ6R327 1708 aa16.48■□□□□ 0.23
MRPL55-204ENST00000348259 NUP153P49790 1475 aaKnown RBP16.47■□□□□ 0.23
MRPL55-204ENST00000348259 ARHGEF40Q8TER5 1519 aa16.46■□□□□ 0.23
MRPL55-204ENST00000348259 PCF11O94913 1555 aaKnown RBP16.46■□□□□ 0.23
MRPL55-204ENST00000348259 FBXO41Q8TF61 875 aa16.45■□□□□ 0.22
MRPL55-204ENST00000348259 LMTK3Q96Q04 1460 aa16.45■□□□□ 0.22
MRPL55-204ENST00000348259 SIGLEC1Q9BZZ2 1709 aa16.44■□□□□ 0.22
MRPL55-204ENST00000348259 RAPGEF3O95398 923 aa16.43■□□□□ 0.22
MRPL55-204ENST00000348259 ZMYM4Q5VZL5 1548 aa16.4■□□□□ 0.22
MRPL55-204ENST00000348259 FHOD3Q2V2M9 1422 aa16.4■□□□□ 0.22
MRPL55-204ENST00000348259 ARID3CA6NKF2 412 aa16.4■□□□□ 0.22
MRPL55-204ENST00000348259 P3H3Q8IVL6 736 aa16.4■□□□□ 0.22
MRPL55-204ENST00000348259 RIMS1Q86UR5 1692 aaKnown RBP16.4■□□□□ 0.22
MRPL55-204ENST00000348259 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.38■□□□□ 0.21
MRPL55-204ENST00000348259 CFAP74Q9C0B2 1584 aa16.37■□□□□ 0.21
MRPL55-204ENST00000348259 TTC37Q6PGP7 1564 aa16.36■□□□□ 0.21
MRPL55-204ENST00000348259 DENND4BO75064 1496 aaPredicted RBP16.35■□□□□ 0.21
MRPL55-204ENST00000348259 AKNAQ7Z591 1439 aa16.34■□□□□ 0.21
MRPL55-204ENST00000348259 CSRNP3Q8WYN3 585 aa16.33■□□□□ 0.2
MRPL55-204ENST00000348259 FANCAO15360 1455 aa16.32■□□□□ 0.2
MRPL55-204ENST00000348259 YEATS2Q9ULM3 1422 aa16.3■□□□□ 0.2
MRPL55-204ENST00000348259 EFCAB5A4FU69 1503 aa16.29■□□□□ 0.2
MRPL55-204ENST00000348259 ZFYVE16Q7Z3T8 1539 aa16.29■□□□□ 0.2
MRPL55-204ENST00000348259 MAGI2Q86UL8 1455 aa16.29■□□□□ 0.2
MRPL55-204ENST00000348259 HECW1Q76N89 1606 aa16.29■□□□□ 0.2
MRPL55-204ENST00000348259 EEA1Q15075 1411 aa16.28■□□□□ 0.2
MRPL55-204ENST00000348259 FAM9AQ8IZU1 332 aaPredicted RBP16.28■□□□□ 0.2
MRPL55-204ENST00000348259 FER1L4A9Z1Z3 1794 aa16.28■□□□□ 0.2
MRPL55-204ENST00000348259 ARHGEF12Q9NZN5 1544 aa16.26■□□□□ 0.19
MRPL55-204ENST00000348259 POGZQ7Z3K3 1410 aa16.25■□□□□ 0.19
MRPL55-204ENST00000348259 CDK13Q14004 1512 aaKnown RBP16.24■□□□□ 0.19
MRPL55-204ENST00000348259 ARID4BQ4LE39 1312 aaPredicted RBP16.24■□□□□ 0.19
MRPL55-204ENST00000348259 PLEKHD1A6NEE1 506 aa16.24■□□□□ 0.19
MRPL55-204ENST00000348259 PLCH2O75038 1416 aa16.23■□□□□ 0.19
MRPL55-204ENST00000348259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.22■□□□□ 0.19
MRPL55-204ENST00000348259 HNRNPUL2Q1KMD3 747 aaKnown RBP16.22■□□□□ 0.19
MRPL55-204ENST00000348259 HSPA2P54652 639 aa16.21■□□□□ 0.19
MRPL55-204ENST00000348259 PREX1Q8TCU6 1659 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms