RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 FHOD3Q2V2M9 1422 aa25.77■■□□□ 1.72
SMARCC2-202ENST00000347471 FAM50AQ14320 339 aaKnown RBP25.74■■□□□ 1.71
SMARCC2-202ENST00000347471 MRC2Q9UBG0 1479 aa25.66■■□□□ 1.7
SMARCC2-202ENST00000347471 CHMP7Q8WUX9 453 aaPredicted RBP25.59■■□□□ 1.69
SMARCC2-202ENST00000347471 ZNF608Q9ULD9 1512 aaPredicted RBP25.58■■□□□ 1.69
SMARCC2-202ENST00000347471 FHAD1B1AJZ9 1412 aa25.51■■□□□ 1.67
SMARCC2-202ENST00000347471 CCNB3Q8WWL7 1395 aa25.46■■□□□ 1.67
SMARCC2-202ENST00000347471 MTUS2Q5JR59 1369 aa25.44■■□□□ 1.66
SMARCC2-202ENST00000347471 CUL7Q14999 1698 aa25.41■■□□□ 1.66
SMARCC2-202ENST00000347471 GRIN2BQ13224 1484 aa25.4■■□□□ 1.66
SMARCC2-202ENST00000347471 ABCA5Q8WWZ7 1642 aa25.38■■□□□ 1.65
SMARCC2-202ENST00000347471 IFT140Q96RY7 1462 aa25.38■■□□□ 1.65
SMARCC2-202ENST00000347471 TARBP1Q13395 1621 aaKnown RBP25.37■■□□□ 1.65
SMARCC2-202ENST00000347471 PHLDB1Q86UU1 1377 aa25.36■■□□□ 1.65
SMARCC2-202ENST00000347471 FMN1Q68DA7 1419 aa25.35■■□□□ 1.65
SMARCC2-202ENST00000347471 SNAPC4Q5SXM2 1469 aa25.34■■□□□ 1.65
SMARCC2-202ENST00000347471 PCF11O94913 1555 aaKnown RBP25.34■■□□□ 1.65
SMARCC2-202ENST00000347471 LRRC9Q6ZRR7 1453 aa25.32■■□□□ 1.64
SMARCC2-202ENST00000347471 WDR97A6NE52 1622 aa25.29■■□□□ 1.64
SMARCC2-202ENST00000347471 TIAM1Q13009 1591 aa25.29■■□□□ 1.64
SMARCC2-202ENST00000347471 CHIC2Q9UKJ5 165 aa25.26■■□□□ 1.63
SMARCC2-202ENST00000347471 CASKIN1Q8WXD9 1431 aa25.25■■□□□ 1.63
SMARCC2-202ENST00000347471 WDR62O43379 1518 aa25.24■■□□□ 1.63
SMARCC2-202ENST00000347471 NEUROD1Q13562 356 aa25.23■■□□□ 1.63
SMARCC2-202ENST00000347471 EFCAB5A4FU69 1503 aa25.23■■□□□ 1.63
SMARCC2-202ENST00000347471 RRBP1Q9P2E9 1410 aaKnown RBP25.21■■□□□ 1.63
SMARCC2-202ENST00000347471 CTTNBP2Q8WZ74 1663 aa25.2■■□□□ 1.62
SMARCC2-202ENST00000347471 FYCO1Q9BQS8 1478 aa25.18■■□□□ 1.62
SMARCC2-202ENST00000347471 DIEXFQ68CQ4 756 aaKnown RBP25.18■■□□□ 1.62
SMARCC2-202ENST00000347471 JPH4Q96JJ6 628 aa25.17■■□□□ 1.62
SMARCC2-202ENST00000347471 PBRM1Q86U86 1689 aa25.16■■□□□ 1.62
SMARCC2-202ENST00000347471 ADAMTS12P58397 1594 aa25.15■■□□□ 1.62
SMARCC2-202ENST00000347471 RAB3GAP2Q9H2M9 1393 aa25.14■■□□□ 1.62
SMARCC2-202ENST00000347471 ZNF777Q9ULD5 760 aaPredicted RBP25.13■■□□□ 1.61
SMARCC2-202ENST00000347471 EIF4G3O43432 1585 aaKnown RBP25.13■■□□□ 1.61
SMARCC2-202ENST00000347471 IQGAP2Q13576 1575 aa25.13■■□□□ 1.61
SMARCC2-202ENST00000347471 RRP7BPQ9NSQ0 103 aa25.12■■□□□ 1.61
SMARCC2-202ENST00000347471 DHX57Q6P158 1386 aaKnown RBP25.12■■□□□ 1.61
SMARCC2-202ENST00000347471 GRIN2AQ12879 1464 aa25.11■■□□□ 1.61
SMARCC2-202ENST00000347471 ZNF316A6NFI3 1004 aaPredicted RBP25.09■■□□□ 1.61
SMARCC2-202ENST00000347471 SIN3AQ96ST3 1273 aa25.06■■□□□ 1.6
SMARCC2-202ENST00000347471 CDK13Q14004 1512 aaKnown RBP25.04■■□□□ 1.6
SMARCC2-202ENST00000347471 TRIM52Q96A61 297 aa25.04■■□□□ 1.6
SMARCC2-202ENST00000347471 THOC2Q8NI27 1593 aaKnown RBP25.04■■□□□ 1.6
SMARCC2-202ENST00000347471 KIAA0586Q9BVV6 1533 aa25.03■■□□□ 1.6
SMARCC2-202ENST00000347471 CDK11AQ9UQ88 783 aaPredicted RBP25.03■■□□□ 1.6
SMARCC2-202ENST00000347471 SETD5Q9C0A6 1442 aa25.01■■□□□ 1.59
SMARCC2-202ENST00000347471 MAP3K1Q13233 1512 aa25■■□□□ 1.59
SMARCC2-202ENST00000347471 NCOA2Q15596 1464 aa25■■□□□ 1.59
SMARCC2-202ENST00000347471 FGD6Q6ZV73 1430 aa24.99■■□□□ 1.59
SMARCC2-202ENST00000347471 SYNJ2O15056 1496 aa24.99■■□□□ 1.59
SMARCC2-202ENST00000347471 SAMD9Q5K651 1589 aa24.97■■□□□ 1.59
SMARCC2-202ENST00000347471 MAGI1Q96QZ7 1491 aaPredicted RBP24.96■■□□□ 1.59
SMARCC2-202ENST00000347471 ZNF644Q9H582 1327 aaPredicted RBP24.94■■□□□ 1.58
SMARCC2-202ENST00000347471 YTHDC1Q96MU7 727 aaKnown RBP24.93■■□□□ 1.58
SMARCC2-202ENST00000347471 EPRSP07814 1512 aaKnown RBP24.93■■□□□ 1.58
SMARCC2-202ENST00000347471 CARMIL2Q6F5E8 1435 aa24.92■■□□□ 1.58
SMARCC2-202ENST00000347471 PLB1Q6P1J6 1458 aa24.91■■□□□ 1.58
SMARCC2-202ENST00000347471 CFAP43Q8NDM7 1665 aa24.9■■□□□ 1.58
SMARCC2-202ENST00000347471 MYOM3Q5VTT5 1437 aa24.9■■□□□ 1.58
SMARCC2-202ENST00000347471 DISP1Q96F81 1524 aa24.88■■□□□ 1.57
SMARCC2-202ENST00000347471 PLEKHD1A6NEE1 506 aa24.88■■□□□ 1.57
SMARCC2-202ENST00000347471 CFDP1Q9UEE9 299 aaPredicted RBP24.88■■□□□ 1.57
SMARCC2-202ENST00000347471 MAGI3Q5TCQ9 1506 aa24.84■■□□□ 1.57
SMARCC2-202ENST00000347471 CEP170Q5SW79 1584 aa24.84■■□□□ 1.57
SMARCC2-202ENST00000347471 PRG4Q92954 1404 aaPredicted RBP24.83■■□□□ 1.57
SMARCC2-202ENST00000347471 CCDC18Q5T9S5 1454 aa24.83■■□□□ 1.57
SMARCC2-202ENST00000347471 UGGT2Q9NYU1 1516 aa24.83■■□□□ 1.57
SMARCC2-202ENST00000347471 HIRIP3Q9BW71 556 aaPredicted RBP24.83■■□□□ 1.57
SMARCC2-202ENST00000347471 KCNH8Q96L42 1107 aa24.82■■□□□ 1.56
SMARCC2-202ENST00000347471 HECW1Q76N89 1606 aa24.82■■□□□ 1.56
SMARCC2-202ENST00000347471 PTPRKQ15262 1439 aa24.82■■□□□ 1.56
SMARCC2-202ENST00000347471 CLSPNQ9HAW4 1339 aa24.81■■□□□ 1.56
SMARCC2-202ENST00000347471 EHBP1L1Q8N3D4 1523 aa24.79■■□□□ 1.56
SMARCC2-202ENST00000347471 KIAA0556O60303 1618 aa24.79■■□□□ 1.56
SMARCC2-202ENST00000347471 FOXD1Q16676 465 aa24.78■■□□□ 1.56
SMARCC2-202ENST00000347471 NUP153P49790 1475 aaKnown RBP24.77■■□□□ 1.56
SMARCC2-202ENST00000347471 PTPRGP23470 1445 aa24.77■■□□□ 1.56
SMARCC2-202ENST00000347471 SUPT6HQ7KZ85 1726 aaKnown RBP24.73■■□□□ 1.55
SMARCC2-202ENST00000347471 NUP160Q12769 1436 aa24.73■■□□□ 1.55
SMARCC2-202ENST00000347471 LRRIQ1Q96JM4 1722 aa24.73■■□□□ 1.55
SMARCC2-202ENST00000347471 MIER1Q8N108 512 aa24.72■■□□□ 1.55
SMARCC2-202ENST00000347471 TONSLQ96HA7 1378 aa24.66■■□□□ 1.54
SMARCC2-202ENST00000347471 RAPGEF6Q8TEU7 1601 aa24.63■■□□□ 1.53
SMARCC2-202ENST00000347471 PTPN23Q9H3S7 1636 aa24.63■■□□□ 1.53
SMARCC2-202ENST00000347471 NAIPQ13075 1403 aa24.62■■□□□ 1.53
SMARCC2-202ENST00000347471 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.62■■□□□ 1.53
SMARCC2-202ENST00000347471 HNRNPMP52272 730 aaKnown RBP eCLIP24.61■■□□□ 1.53
SMARCC2-202ENST00000347471 TROQ12816 1431 aaPredicted RBP24.61■■□□□ 1.53
SMARCC2-202ENST00000347471 SLC4A1APQ9BWU0 796 aaKnown RBP24.6■■□□□ 1.53
SMARCC2-202ENST00000347471 MAPKBP1O60336 1514 aa24.59■■□□□ 1.53
SMARCC2-202ENST00000347471 HFM1A2PYH4 1435 aa24.59■■□□□ 1.53
SMARCC2-202ENST00000347471 TSPY4P0CV99 314 aa24.56■■□□□ 1.52
SMARCC2-202ENST00000347471 TSPY10P0CW01 314 aa24.56■■□□□ 1.52
SMARCC2-202ENST00000347471 MPHOSPH9Q99550 1183 aa24.55■■□□□ 1.52
SMARCC2-202ENST00000347471 MYT1LQ9UL68 1186 aa24.55■■□□□ 1.52
SMARCC2-202ENST00000347471 ZNF326Q5BKZ1 582 aaKnown RBP24.53■■□□□ 1.52
SMARCC2-202ENST00000347471 ATP10BO94823 1461 aa24.52■■□□□ 1.52
SMARCC2-202ENST00000347471 DDX10Q13206 875 aaKnown RBP24.52■■□□□ 1.52
SMARCC2-202ENST00000347471 MIA2Q96PC5 1412 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms