RNA–Protein interactions for RNA: ENST00000347140.7

R3HDM2-201, Transcript of R3H domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-201ENST00000347140 TIMELESSQ9UNS1 1208 aa21.61■■□□□ 1.05
R3HDM2-201ENST00000347140 IRX6P78412 446 aaPredicted RBP21.59■■□□□ 1.05
R3HDM2-201ENST00000347140 ERICH3Q5RHP9 1530 aa21.59■■□□□ 1.05
R3HDM2-201ENST00000347140 PRXQ9BXM0 1461 aa21.54■■□□□ 1.04
R3HDM2-201ENST00000347140 TOP2BQ02880 1626 aa21.51■■□□□ 1.03
R3HDM2-201ENST00000347140 PPP1R15AO75807 674 aaPredicted RBP21.5■■□□□ 1.03
R3HDM2-201ENST00000347140 MYT1LQ9UL68 1186 aa21.46■■□□□ 1.03
R3HDM2-201ENST00000347140 CUX2O14529 1486 aa21.45■■□□□ 1.02
R3HDM2-201ENST00000347140 ARHGAP35Q9NRY4 1499 aa21.43■■□□□ 1.02
R3HDM2-201ENST00000347140 PEG3Q9GZU2 1588 aa21.43■■□□□ 1.02
R3HDM2-201ENST00000347140 UNC13AQ9UPW8 1703 aa21.41■■□□□ 1.02
R3HDM2-201ENST00000347140 FHAD1B1AJZ9 1412 aa21.41■■□□□ 1.02
R3HDM2-201ENST00000347140 WDR97A6NE52 1622 aa21.41■■□□□ 1.02
R3HDM2-201ENST00000347140 FAM9BQ8IZU0 186 aa21.37■■□□□ 1.01
R3HDM2-201ENST00000347140 PPP4R2Q9NY27 417 aa21.36■■□□□ 1.01
R3HDM2-201ENST00000347140 CARMIL1Q5VZK9 1371 aa21.36■■□□□ 1.01
R3HDM2-201ENST00000347140 RTL5Q5HYW3 569 aaPredicted RBP21.35■■□□□ 1.01
R3HDM2-201ENST00000347140 MAPKBP1O60336 1514 aa21.34■■□□□ 1.01
R3HDM2-201ENST00000347140 PHLDB1Q86UU1 1377 aa21.34■■□□□ 1.01
R3HDM2-201ENST00000347140 CNGB1Q14028 1251 aaPredicted RBP21.34■■□□□ 1.01
R3HDM2-201ENST00000347140 FANCIQ9NVI1 1328 aa21.34■■□□□ 1.01
R3HDM2-201ENST00000347140 LRRC9Q6ZRR7 1453 aa21.31■■□□□ 1
R3HDM2-201ENST00000347140 POLR3GLQ9BT43 218 aa21.31■■□□□ 1
R3HDM2-201ENST00000347140 MTUS2Q5JR59 1369 aa21.3■■□□□ 1
R3HDM2-201ENST00000347140 MRS2Q9HD23 443 aa21.3■■□□□ 1
R3HDM2-201ENST00000347140 BICRAQ9NZM4 1560 aa21.29■■□□□ 1
R3HDM2-201ENST00000347140 ERICH6BQ5W0A0 696 aa21.29■■□□□ 1
R3HDM2-201ENST00000347140 EIF4G2P78344 907 aaKnown RBP eCLIP21.28■■□□□ 13e-8■■■■□ 20.2
R3HDM2-201ENST00000347140 TIAM1Q13009 1591 aa21.27■■□□□ 1
R3HDM2-201ENST00000347140 BIVM-ERCC5R4GMW8 1640 aa21.26■□□□□ 0.99
R3HDM2-201ENST00000347140 NBR1Q14596 966 aa21.25■□□□□ 0.99
R3HDM2-201ENST00000347140 ANP32AP39687 249 aaKnown RBP21.25■□□□□ 0.99
R3HDM2-201ENST00000347140 B4GALNT3Q6L9W6 998 aa21.24■□□□□ 0.99
R3HDM2-201ENST00000347140 MSH5O43196 834 aa21.24■□□□□ 0.99
R3HDM2-201ENST00000347140 CUX1P39880 1505 aa21.24■□□□□ 0.99
R3HDM2-201ENST00000347140 IGF1RP08069 1367 aa21.21■□□□□ 0.99
R3HDM2-201ENST00000347140 HSPA5P11021 654 aaKnown RBP21.2■□□□□ 0.99
R3HDM2-201ENST00000347140 CHIC2Q9UKJ5 165 aa21.2■□□□□ 0.98
R3HDM2-201ENST00000347140 DEKP35659 375 aaKnown RBP21.19■□□□□ 0.98
R3HDM2-201ENST00000347140 RRP7BPQ9NSQ0 103 aa21.18■□□□□ 0.98
R3HDM2-201ENST00000347140 NOP58Q9Y2X3 529 aaKnown RBP21.17■□□□□ 0.98
R3HDM2-201ENST00000347140 MAP3K1Q13233 1512 aa21.16■□□□□ 0.98
R3HDM2-201ENST00000347140 CCDC136Q96JN2 1154 aa21.16■□□□□ 0.98
R3HDM2-201ENST00000347140 FHOD3Q2V2M9 1422 aa21.15■□□□□ 0.98
R3HDM2-201ENST00000347140 CCDC18Q5T9S5 1454 aa21.15■□□□□ 0.98
R3HDM2-201ENST00000347140 ZBTB47Q9UFB7 747 aaPredicted RBP21.1■□□□□ 0.97
R3HDM2-201ENST00000347140 UACAQ9BZF9 1416 aa21.07■□□□□ 0.96
R3HDM2-201ENST00000347140 FGD6Q6ZV73 1430 aa21.06■□□□□ 0.96
R3HDM2-201ENST00000347140 ZNF326Q5BKZ1 582 aaKnown RBP21.05■□□□□ 0.96
R3HDM2-201ENST00000347140 FMN1Q68DA7 1419 aa21.05■□□□□ 0.96
R3HDM2-201ENST00000347140 WASHC2AQ641Q2 1341 aa21.03■□□□□ 0.96
R3HDM2-201ENST00000347140 CFTRP13569 1480 aa21.03■□□□□ 0.96
R3HDM2-201ENST00000347140 NPM2Q86SE8 214 aaKnown RBP21.03■□□□□ 0.96
R3HDM2-201ENST00000347140 NCAPD3P42695 1498 aa21.02■□□□□ 0.96
R3HDM2-201ENST00000347140 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21■□□□□ 0.95
R3HDM2-201ENST00000347140 PRKRIP1Q9H875 184 aaPredicted RBP21■□□□□ 0.95
R3HDM2-201ENST00000347140 ZBED9Q6R2W3 1325 aa21■□□□□ 0.95
R3HDM2-201ENST00000347140 PCF11O94913 1555 aaKnown RBP20.98■□□□□ 0.95
R3HDM2-201ENST00000347140 FYCO1Q9BQS8 1478 aa20.98■□□□□ 0.95
R3HDM2-201ENST00000347140 FGD5Q6ZNL6 1462 aa20.98■□□□□ 0.95
R3HDM2-201ENST00000347140 CASKIN1Q8WXD9 1431 aa20.97■□□□□ 0.95
R3HDM2-201ENST00000347140 ARID3CA6NKF2 412 aa20.97■□□□□ 0.95
R3HDM2-201ENST00000347140 CNTLNQ9NXG0 1405 aa20.96■□□□□ 0.95
R3HDM2-201ENST00000347140 HFM1A2PYH4 1435 aa20.95■□□□□ 0.94
R3HDM2-201ENST00000347140 L3MBTL2Q969R5 705 aa20.95■□□□□ 0.94
R3HDM2-201ENST00000347140 HMGXB3Q12766 1538 aa20.94■□□□□ 0.94
R3HDM2-201ENST00000347140 TMC1Q8TDI8 760 aa20.94■□□□□ 0.94
R3HDM2-201ENST00000347140 DAXXQ9UER7 740 aaPredicted RBP20.93■□□□□ 0.94
R3HDM2-201ENST00000347140 CADPSQ9ULU8 1353 aa20.92■□□□□ 0.94
R3HDM2-201ENST00000347140 CCDC184Q52MB2 194 aa20.92■□□□□ 0.94
R3HDM2-201ENST00000347140 SENP3-EIF4A1A0A087X0R7 540 aa20.92■□□□□ 0.94
R3HDM2-201ENST00000347140 MPHOSPH9Q99550 1183 aa20.91■□□□□ 0.94
R3HDM2-201ENST00000347140 FOXD1Q16676 465 aa20.91■□□□□ 0.94
R3HDM2-201ENST00000347140 SLC4A1APQ9BWU0 796 aaKnown RBP20.9■□□□□ 0.94
R3HDM2-201ENST00000347140 IPO9Q96P70 1041 aaKnown RBP20.89■□□□□ 0.93
R3HDM2-201ENST00000347140 CCDC7Q96M83 1385 aa20.88■□□□□ 0.93
R3HDM2-201ENST00000347140 MYOM3Q5VTT5 1437 aa20.87■□□□□ 0.93
R3HDM2-201ENST00000347140 NUDCQ9Y266 331 aa20.87■□□□□ 0.93
R3HDM2-201ENST00000347140 NAIPQ13075 1403 aa20.85■□□□□ 0.93
R3HDM2-201ENST00000347140 EFCAB5A4FU69 1503 aa20.85■□□□□ 0.93
R3HDM2-201ENST00000347140 CFAP43Q8NDM7 1665 aa20.84■□□□□ 0.93
R3HDM2-201ENST00000347140 NCOA2Q15596 1464 aa20.82■□□□□ 0.92
R3HDM2-201ENST00000347140 PAK3O75914 559 aaPredicted RBP20.82■□□□□ 0.92
R3HDM2-201ENST00000347140 SALL2Q9Y467 1007 aaPredicted RBP20.8■□□□□ 0.92
R3HDM2-201ENST00000347140 PTPN23Q9H3S7 1636 aa20.8■□□□□ 0.92
R3HDM2-201ENST00000347140 AQRO60306 1485 aaKnown RBP eCLIP20.8■□□□□ 0.924e-7■■■■□ 20.6
R3HDM2-201ENST00000347140 KIF7Q2M1P5 1343 aa20.77■□□□□ 0.92
R3HDM2-201ENST00000347140 PTPRKQ15262 1439 aa20.77■□□□□ 0.91
R3HDM2-201ENST00000347140 LAS1LQ9Y4W2 734 aaKnown RBP20.76■□□□□ 0.91
R3HDM2-201ENST00000347140 RAD54L2Q9Y4B4 1467 aa20.75■□□□□ 0.91
R3HDM2-201ENST00000347140 NEFMP07197 916 aa20.75■□□□□ 0.91
R3HDM2-201ENST00000347140 C11orf95C9JLR9 678 aaPredicted RBP20.74■□□□□ 0.91
R3HDM2-201ENST00000347140 AKNAQ7Z591 1439 aa20.73■□□□□ 0.91
R3HDM2-201ENST00000347140 FANCD2Q9BXW9 1451 aa20.71■□□□□ 0.91
R3HDM2-201ENST00000347140 RTN4Q9NQC3 1192 aaKnown RBP20.71■□□□□ 0.91
R3HDM2-201ENST00000347140 PPM1GO15355 546 aaPredicted RBP20.69■□□□□ 0.9
R3HDM2-201ENST00000347140 SMG6Q86US8 1419 aaKnown RBP20.69■□□□□ 0.9
R3HDM2-201ENST00000347140 ZNF777Q9ULD5 760 aaPredicted RBP20.69■□□□□ 0.9
R3HDM2-201ENST00000347140 NCOA1Q15788 1441 aa20.68■□□□□ 0.9
R3HDM2-201ENST00000347140 TCERG1O14776 1098 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms