RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 RUSC2Q8N2Y8 1516 aa26.51■■□□□ 1.83
TSPAN4-201ENST00000346501 PRG4Q92954 1404 aaPredicted RBP26.51■■□□□ 1.83
TSPAN4-201ENST00000346501 RAPGEF2Q9Y4G8 1499 aa26.48■■□□□ 1.83
TSPAN4-201ENST00000346501 ERCC6L2Q5T890 1561 aa26.44■■□□□ 1.82
TSPAN4-201ENST00000346501 TRHP20396 242 aaPredicted RBP26.39■■□□□ 1.82
TSPAN4-201ENST00000346501 CARMIL2Q6F5E8 1435 aa26.35■■□□□ 1.81
TSPAN4-201ENST00000346501 IQGAP2Q13576 1575 aa26.34■■□□□ 1.81
TSPAN4-201ENST00000346501 EEA1Q15075 1411 aa26.34■■□□□ 1.81
TSPAN4-201ENST00000346501 CSRNP3Q8WYN3 585 aa26.32■■□□□ 1.8
TSPAN4-201ENST00000346501 NPM1P06748 294 aaKnown RBP eCLIP26.27■■□□□ 1.8
TSPAN4-201ENST00000346501 PRXQ9BXM0 1461 aa26.27■■□□□ 1.8
TSPAN4-201ENST00000346501 CHIC1Q5VXU3 224 aa26.26■■□□□ 1.79
TSPAN4-201ENST00000346501 PTPRGP23470 1445 aa26.22■■□□□ 1.79
TSPAN4-201ENST00000346501 TNIKQ9UKE5 1360 aa26.21■■□□□ 1.79
TSPAN4-201ENST00000346501 TTBK1Q5TCY1 1321 aaPredicted RBP26.2■■□□□ 1.79
TSPAN4-201ENST00000346501 FAM9AQ8IZU1 332 aaPredicted RBP26.2■■□□□ 1.78
TSPAN4-201ENST00000346501 CTTNBP2Q8WZ74 1663 aa26.17■■□□□ 1.78
TSPAN4-201ENST00000346501 UGGT2Q9NYU1 1516 aa26.16■■□□□ 1.78
TSPAN4-201ENST00000346501 GOLGA3Q08378 1498 aa26.12■■□□□ 1.77
TSPAN4-201ENST00000346501 DISP1Q96F81 1524 aa26.1■■□□□ 1.77
TSPAN4-201ENST00000346501 KIAA0556O60303 1618 aa26.05■■□□□ 1.76
TSPAN4-201ENST00000346501 ADCY10Q96PN6 1610 aa26.04■■□□□ 1.76
TSPAN4-201ENST00000346501 UACAQ9BZF9 1416 aa26.01■■□□□ 1.75
TSPAN4-201ENST00000346501 KIF21BO75037 1637 aa25.97■■□□□ 1.75
TSPAN4-201ENST00000346501 MAPKBP1O60336 1514 aa25.96■■□□□ 1.75
TSPAN4-201ENST00000346501 UHRF1BP1LA0JNW5 1464 aa25.96■■□□□ 1.75
TSPAN4-201ENST00000346501 ABCC2Q92887 1545 aa25.95■■□□□ 1.74
TSPAN4-201ENST00000346501 UBTFP17480 764 aaKnown RBP25.92■■□□□ 1.74
TSPAN4-201ENST00000346501 FAM69CQ0P6D2 419 aa25.91■■□□□ 1.74
TSPAN4-201ENST00000346501 RANGAP1P46060 587 aaPredicted RBP25.89■■□□□ 1.74
TSPAN4-201ENST00000346501 P3H3Q8IVL6 736 aa25.89■■□□□ 1.74
TSPAN4-201ENST00000346501 ABCC10Q5T3U5 1492 aa25.88■■□□□ 1.73
TSPAN4-201ENST00000346501 EHMT2Q96KQ7 1210 aa25.86■■□□□ 1.73
TSPAN4-201ENST00000346501 PLB1Q6P1J6 1458 aa25.85■■□□□ 1.73
TSPAN4-201ENST00000346501 KDM5BQ9UGL1 1544 aa25.82■■□□□ 1.72
TSPAN4-201ENST00000346501 ASXL2Q76L83 1435 aa25.8■■□□□ 1.72
TSPAN4-201ENST00000346501 KIF13AQ9H1H9 1805 aa25.8■■□□□ 1.72
TSPAN4-201ENST00000346501 SAMD9Q5K651 1589 aa25.79■■□□□ 1.72
TSPAN4-201ENST00000346501 DIP2BQ9P265 1576 aa25.78■■□□□ 1.72
TSPAN4-201ENST00000346501 ABCA8O94911 1581 aa25.76■■□□□ 1.71
TSPAN4-201ENST00000346501 ZCCHC11Q5TAX3 1644 aaKnown RBP25.74■■□□□ 1.71
TSPAN4-201ENST00000346501 EFCAB5A4FU69 1503 aa25.74■■□□□ 1.71
TSPAN4-201ENST00000346501 FHOD3Q2V2M9 1422 aa25.69■■□□□ 1.7
TSPAN4-201ENST00000346501 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.66■■□□□ 1.7
TSPAN4-201ENST00000346501 HNRNPUL2Q1KMD3 747 aaKnown RBP25.66■■□□□ 1.7
TSPAN4-201ENST00000346501 WDR7Q9Y4E6 1490 aa25.66■■□□□ 1.7
TSPAN4-201ENST00000346501 ARID3CA6NKF2 412 aa25.64■■□□□ 1.7
TSPAN4-201ENST00000346501 GLI2P10070 1586 aa25.64■■□□□ 1.69
TSPAN4-201ENST00000346501 RAPGEF6Q8TEU7 1601 aa25.63■■□□□ 1.69
TSPAN4-201ENST00000346501 EPRSP07814 1512 aaKnown RBP25.63■■□□□ 1.69
TSPAN4-201ENST00000346501 KCNH8Q96L42 1107 aa25.61■■□□□ 1.69
TSPAN4-201ENST00000346501 TSPOAP1O95153 1857 aa25.6■■□□□ 1.69
TSPAN4-201ENST00000346501 ATP10BO94823 1461 aa25.58■■□□□ 1.69
TSPAN4-201ENST00000346501 FMN1Q68DA7 1419 aa25.56■■□□□ 1.68
TSPAN4-201ENST00000346501 TEX14Q8IWB6 1497 aa25.53■■□□□ 1.68
TSPAN4-201ENST00000346501 ATP1B4Q9UN42 357 aaPredicted RBP25.53■■□□□ 1.68
TSPAN4-201ENST00000346501 ARHGAP35Q9NRY4 1499 aa25.52■■□□□ 1.68
TSPAN4-201ENST00000346501 PLEKHD1A6NEE1 506 aa25.51■■□□□ 1.67
TSPAN4-201ENST00000346501 NUP153P49790 1475 aaKnown RBP25.51■■□□□ 1.67
TSPAN4-201ENST00000346501 KDM6BO15054 1643 aa25.48■■□□□ 1.67
TSPAN4-201ENST00000346501 MAP3K4Q9Y6R4 1608 aa25.48■■□□□ 1.67
TSPAN4-201ENST00000346501 CD109Q6YHK3 1445 aa25.47■■□□□ 1.67
TSPAN4-201ENST00000346501 CFAP43Q8NDM7 1665 aa25.45■■□□□ 1.66
TSPAN4-201ENST00000346501 CDK11AQ9UQ88 783 aaPredicted RBP25.43■■□□□ 1.66
TSPAN4-201ENST00000346501 HECW1Q76N89 1606 aa25.41■■□□□ 1.66
TSPAN4-201ENST00000346501 CLIP1P30622 1438 aa25.4■■□□□ 1.66
TSPAN4-201ENST00000346501 PPRC1Q5VV67 1664 aaKnown RBP25.39■■□□□ 1.66
TSPAN4-201ENST00000346501 MAGI3Q5TCQ9 1506 aa25.39■■□□□ 1.66
TSPAN4-201ENST00000346501 ABCA9Q8IUA7 1624 aa25.32■■□□□ 1.64
TSPAN4-201ENST00000346501 CDK13Q14004 1512 aaKnown RBP25.32■■□□□ 1.64
TSPAN4-201ENST00000346501 PHLDB1Q86UU1 1377 aa25.3■■□□□ 1.64
TSPAN4-201ENST00000346501 CASKIN1Q8WXD9 1431 aa25.28■■□□□ 1.64
TSPAN4-201ENST00000346501 AEBP2Q6ZN18 517 aaPredicted RBP25.25■■□□□ 1.63
TSPAN4-201ENST00000346501 CCDC18Q5T9S5 1454 aa25.25■■□□□ 1.63
TSPAN4-201ENST00000346501 FYCO1Q9BQS8 1478 aa25.22■■□□□ 1.63
TSPAN4-201ENST00000346501 CEP162Q5TB80 1403 aa25.22■■□□□ 1.63
TSPAN4-201ENST00000346501 PCF11O94913 1555 aaKnown RBP25.21■■□□□ 1.63
TSPAN4-201ENST00000346501 NEO1Q92859 1461 aa25.21■■□□□ 1.63
TSPAN4-201ENST00000346501 COL17A1Q9UMD9 1497 aaPredicted RBP25.21■■□□□ 1.63
TSPAN4-201ENST00000346501 LOC105371045A0A1W2PR82 267 aa25.18■■□□□ 1.62
TSPAN4-201ENST00000346501 TROQ12816 1431 aaPredicted RBP25.18■■□□□ 1.62
TSPAN4-201ENST00000346501 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.17■■□□□ 1.62
TSPAN4-201ENST00000346501 ARAP3Q8WWN8 1544 aa25.17■■□□□ 1.62
TSPAN4-201ENST00000346501 KIF14Q15058 1648 aa25.14■■□□□ 1.61
TSPAN4-201ENST00000346501 CFAP74Q9C0B2 1584 aa25.14■■□□□ 1.61
TSPAN4-201ENST00000346501 FANCAO15360 1455 aa25.13■■□□□ 1.61
TSPAN4-201ENST00000346501 TTC37Q6PGP7 1564 aa25.11■■□□□ 1.61
TSPAN4-201ENST00000346501 EFCAB2Q5VUJ9 269 aa25.09■■□□□ 1.61
TSPAN4-201ENST00000346501 PLCH2O75038 1416 aa25.09■■□□□ 1.61
TSPAN4-201ENST00000346501 AKNAQ7Z591 1439 aa25.08■■□□□ 1.61
TSPAN4-201ENST00000346501 LRRIQ1Q96JM4 1722 aa25.08■■□□□ 1.61
TSPAN4-201ENST00000346501 DENND4BO75064 1496 aaPredicted RBP25.05■■□□□ 1.6
TSPAN4-201ENST00000346501 RAPGEF3O95398 923 aa25.05■■□□□ 1.6
TSPAN4-201ENST00000346501 MYO5CQ9NQX4 1742 aa25.04■■□□□ 1.6
TSPAN4-201ENST00000346501 MTUS2Q5JR59 1369 aa25.02■■□□□ 1.6
TSPAN4-201ENST00000346501 ADGRL1O94910 1474 aa24.99■■□□□ 1.59
TSPAN4-201ENST00000346501 ARHGAP5Q13017 1502 aa24.99■■□□□ 1.59
TSPAN4-201ENST00000346501 SCAPERQ9BY12 1400 aa24.96■■□□□ 1.59
TSPAN4-201ENST00000346501 VPS8Q8N3P4 1428 aa24.95■■□□□ 1.58
TSPAN4-201ENST00000346501 KDM4FA0A1W2PPD8 638 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms