RNA–Protein interactions for RNA: ENST00000346208.3

GATA3-201, Transcript of GATA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GATA3, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATA3-201ENST00000346208 HIRIP3Q9BW71 556 aaPredicted RBP22.79■■□□□ 1.24
GATA3-201ENST00000346208 NBR1Q14596 966 aa22.78■■□□□ 1.24
GATA3-201ENST00000346208 SALL2Q9Y467 1007 aaPredicted RBP22.78■■□□□ 1.24
GATA3-201ENST00000346208 PABPN1Q86U42 306 aaKnown RBP eCLIP22.76■■□□□ 1.23
GATA3-201ENST00000346208 RAB3GAP2Q9H2M9 1393 aa22.75■■□□□ 1.23
GATA3-201ENST00000346208 SIN3AQ96ST3 1273 aa22.71■■□□□ 1.23
GATA3-201ENST00000346208 NOP58Q9Y2X3 529 aaKnown RBP22.69■■□□□ 1.22
GATA3-201ENST00000346208 PAK3O75914 559 aaPredicted RBP22.67■■□□□ 1.22
GATA3-201ENST00000346208 HNRNPUQ00839 825 aaKnown RBP eCLIP22.66■■□□□ 1.22
GATA3-201ENST00000346208 CCDC136Q96JN2 1154 aa22.65■■□□□ 1.22
GATA3-201ENST00000346208 PRXQ9BXM0 1461 aa22.65■■□□□ 1.22
GATA3-201ENST00000346208 ERICH6BQ5W0A0 696 aa22.65■■□□□ 1.22
GATA3-201ENST00000346208 BICRAQ9NZM4 1560 aa22.63■■□□□ 1.21
GATA3-201ENST00000346208 ERICH3Q5RHP9 1530 aa22.63■■□□□ 1.21
GATA3-201ENST00000346208 PPP4R2Q9NY27 417 aa22.62■■□□□ 1.21
GATA3-201ENST00000346208 SETD5Q9C0A6 1442 aa22.58■■□□□ 1.21
GATA3-201ENST00000346208 IL27Q8NEV9 243 aa22.57■■□□□ 1.2
GATA3-201ENST00000346208 B4GALNT3Q6L9W6 998 aa22.56■■□□□ 1.2
GATA3-201ENST00000346208 PEG3Q9GZU2 1588 aa22.56■■□□□ 1.2
GATA3-201ENST00000346208 TOP2BQ02880 1626 aa22.56■■□□□ 1.2
GATA3-201ENST00000346208 RTN4Q9NQC3 1192 aaKnown RBP22.54■■□□□ 1.2
GATA3-201ENST00000346208 TIMELESSQ9UNS1 1208 aa22.5■■□□□ 1.19
GATA3-201ENST00000346208 ARHGAP35Q9NRY4 1499 aa22.5■■□□□ 1.19
GATA3-201ENST00000346208 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.49■■□□□ 1.19
GATA3-201ENST00000346208 RTL5Q5HYW3 569 aaPredicted RBP22.48■■□□□ 1.19
GATA3-201ENST00000346208 FAM50AQ14320 339 aaKnown RBP22.44■■□□□ 1.18
GATA3-201ENST00000346208 ATAD2BQ9ULI0 1458 aa22.42■■□□□ 1.18
GATA3-201ENST00000346208 BIVM-ERCC5R4GMW8 1640 aa22.4■■□□□ 1.18
GATA3-201ENST00000346208 PHLDB1Q86UU1 1377 aa22.39■■□□□ 1.17
GATA3-201ENST00000346208 IPO9Q96P70 1041 aaKnown RBP22.37■■□□□ 1.17
GATA3-201ENST00000346208 ANP32AP39687 249 aaKnown RBP22.35■■□□□ 1.17
GATA3-201ENST00000346208 UBE2Q2Q8WVN8 375 aa22.35■■□□□ 1.17
GATA3-201ENST00000346208 KIF27Q86VH2 1401 aa22.35■■□□□ 1.17
GATA3-201ENST00000346208 TIAM1Q13009 1591 aa22.34■■□□□ 1.17
GATA3-201ENST00000346208 ZBTB47Q9UFB7 747 aaPredicted RBP22.33■■□□□ 1.16
GATA3-201ENST00000346208 SLC24A1O60721 1099 aa22.32■■□□□ 1.16
GATA3-201ENST00000346208 LRRC9Q6ZRR7 1453 aa22.31■■□□□ 1.16
GATA3-201ENST00000346208 CCDC184Q52MB2 194 aa22.3■■□□□ 1.16
GATA3-201ENST00000346208 MAP3K1Q13233 1512 aa22.28■■□□□ 1.16
GATA3-201ENST00000346208 TONSLQ96HA7 1378 aa22.28■■□□□ 1.16
GATA3-201ENST00000346208 WASHC2AQ641Q2 1341 aa22.25■■□□□ 1.15
GATA3-201ENST00000346208 CUX1P39880 1505 aa22.24■■□□□ 1.15
GATA3-201ENST00000346208 FAM9BQ8IZU0 186 aa22.22■■□□□ 1.15
GATA3-201ENST00000346208 ZBED9Q6R2W3 1325 aa22.18■■□□□ 1.14
GATA3-201ENST00000346208 ATP1B4Q9UN42 357 aaPredicted RBP22.17■■□□□ 1.14
GATA3-201ENST00000346208 LAS1LQ9Y4W2 734 aaKnown RBP22.16■■□□□ 1.14
GATA3-201ENST00000346208 NEFMP07197 916 aa22.14■■□□□ 1.13
GATA3-201ENST00000346208 FHAD1B1AJZ9 1412 aa22.14■■□□□ 1.13
GATA3-201ENST00000346208 AKNAQ7Z591 1439 aa22.12■■□□□ 1.13
GATA3-201ENST00000346208 NPM2Q86SE8 214 aaKnown RBP22.11■■□□□ 1.13
GATA3-201ENST00000346208 P3H3Q8IVL6 736 aa22.11■■□□□ 1.13
GATA3-201ENST00000346208 MRS2Q9HD23 443 aa22.11■■□□□ 1.13
GATA3-201ENST00000346208 C11orf95C9JLR9 678 aaPredicted RBP22.1■■□□□ 1.13
GATA3-201ENST00000346208 IGF1RP08069 1367 aa22.1■■□□□ 1.13
GATA3-201ENST00000346208 HSPA5P11021 654 aaKnown RBP22.1■■□□□ 1.13
GATA3-201ENST00000346208 WASHC2CQ9Y4E1 1318 aa22.09■■□□□ 1.13
GATA3-201ENST00000346208 BRPF3Q9ULD4 1205 aa22.09■■□□□ 1.13
GATA3-201ENST00000346208 NCAPD3P42695 1498 aa22.08■■□□□ 1.13
GATA3-201ENST00000346208 CNTLNQ9NXG0 1405 aa22.07■■□□□ 1.12
GATA3-201ENST00000346208 EIF5BO60841 1220 aaKnown RBP22.07■■□□□ 1.12
GATA3-201ENST00000346208 PRKRIP1Q9H875 184 aaPredicted RBP22.05■■□□□ 1.12
GATA3-201ENST00000346208 KDM5BQ9UGL1 1544 aa22.05■■□□□ 1.12
GATA3-201ENST00000346208 CCDC18Q5T9S5 1454 aa22.05■■□□□ 1.12
GATA3-201ENST00000346208 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.04■■□□□ 1.12
GATA3-201ENST00000346208 NCOA2Q15596 1464 aa22.04■■□□□ 1.12
GATA3-201ENST00000346208 UACAQ9BZF9 1416 aa22.03■■□□□ 1.12
GATA3-201ENST00000346208 USP35Q9P2H5 1018 aa22.03■■□□□ 1.12
GATA3-201ENST00000346208 CFAP43Q8NDM7 1665 aa22.02■■□□□ 1.12
GATA3-201ENST00000346208 CARMIL1Q5VZK9 1371 aa22.01■■□□□ 1.11
GATA3-201ENST00000346208 PCF11O94913 1555 aaKnown RBP22.01■■□□□ 1.11
GATA3-201ENST00000346208 SMG6Q86US8 1419 aaKnown RBP22■■□□□ 1.11
GATA3-201ENST00000346208 PTPRKQ15262 1439 aa21.98■■□□□ 1.11
GATA3-201ENST00000346208 RNF123Q5XPI4 1314 aa21.96■■□□□ 1.11
GATA3-201ENST00000346208 EIF4G2P78344 907 aaKnown RBP eCLIP21.96■■□□□ 1.11
GATA3-201ENST00000346208 HFM1A2PYH4 1435 aa21.95■■□□□ 1.11
GATA3-201ENST00000346208 NUDCQ9Y266 331 aa21.95■■□□□ 1.1
GATA3-201ENST00000346208 AQRO60306 1485 aaKnown RBP eCLIP21.95■■□□□ 1.1
GATA3-201ENST00000346208 FGD6Q6ZV73 1430 aa21.95■■□□□ 1.1
GATA3-201ENST00000346208 PPM1GO15355 546 aaPredicted RBP21.93■■□□□ 1.1
GATA3-201ENST00000346208 FHOD3Q2V2M9 1422 aa21.92■■□□□ 1.1
GATA3-201ENST00000346208 PTPN23Q9H3S7 1636 aa21.9■■□□□ 1.1
GATA3-201ENST00000346208 SENP3-EIF4A1A0A087X0R7 540 aa21.9■■□□□ 1.1
GATA3-201ENST00000346208 CCDC7Q96M83 1385 aa21.9■■□□□ 1.1
GATA3-201ENST00000346208 NAIPQ13075 1403 aa21.89■■□□□ 1.09
GATA3-201ENST00000346208 GSE1Q14687 1217 aa21.88■■□□□ 1.09
GATA3-201ENST00000346208 PDE4AP27815 886 aa21.87■■□□□ 1.09
GATA3-201ENST00000346208 CFTRP13569 1480 aa21.87■■□□□ 1.09
GATA3-201ENST00000346208 FYCO1Q9BQS8 1478 aa21.86■■□□□ 1.09
GATA3-201ENST00000346208 NCOA1Q15788 1441 aa21.85■■□□□ 1.09
GATA3-201ENST00000346208 CASKIN1Q8WXD9 1431 aa21.85■■□□□ 1.09
GATA3-201ENST00000346208 TCERG1O14776 1098 aaKnown RBP21.83■■□□□ 1.08
GATA3-201ENST00000346208 FGD5Q6ZNL6 1462 aa21.82■■□□□ 1.08
GATA3-201ENST00000346208 CNGB1Q14028 1251 aaPredicted RBP21.82■■□□□ 1.08
GATA3-201ENST00000346208 FRAT1Q92837 279 aaPredicted RBP21.82■■□□□ 1.08
GATA3-201ENST00000346208 FMN1Q68DA7 1419 aa21.81■■□□□ 1.08
GATA3-201ENST00000346208 BACH2Q9BYV9 841 aa21.81■■□□□ 1.08
GATA3-201ENST00000346208 L3MBTL2Q969R5 705 aa21.79■■□□□ 1.08
GATA3-201ENST00000346208 MTUS2Q5JR59 1369 aa21.79■■□□□ 1.08
GATA3-201ENST00000346208 PKNOX2Q96KN3 472 aa21.78■■□□□ 1.08
GATA3-201ENST00000346208 RRP7BPQ9NSQ0 103 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms